RNA–Protein interactions for RNA: ENST00000536495.1

AP003721.2-201, humanhuman

TSL 3 BASIC

Gene AP003721.2, Length 452 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003721.2-201ENST00000536495 AEBP2Q6ZN18 517 aaPredicted RBP23.44■■□□□ 1.34
AP003721.2-201ENST00000536495 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
AP003721.2-201ENST00000536495 SENP3Q9H4L4 574 aaPredicted RBP20.03■□□□□ 0.8
AP003721.2-201ENST00000536495 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
AP003721.2-201ENST00000536495 NISCHQ9Y2I1 1504 aa19.3■□□□□ 0.68
AP003721.2-201ENST00000536495 FOXD1Q16676 465 aa18.68■□□□□ 0.58
AP003721.2-201ENST00000536495 PLPPR3Q6T4P5 718 aa17.66■□□□□ 0.42
AP003721.2-201ENST00000536495 MSH5O43196 834 aa17.53■□□□□ 0.4
AP003721.2-201ENST00000536495 PIAS4Q8N2W9 510 aaPredicted RBP17.46■□□□□ 0.39
AP003721.2-201ENST00000536495 PPP6R1Q9UPN7 881 aa17.39■□□□□ 0.37
AP003721.2-201ENST00000536495 ADRA2BP18089 450 aa17.35■□□□□ 0.37
AP003721.2-201ENST00000536495 POTEDQ86YR6 584 aa17.31■□□□□ 0.36
AP003721.2-201ENST00000536495 CCDC180Q9P1Z9 1646 aa17.21■□□□□ 0.35
AP003721.2-201ENST00000536495 ABCC9O60706 1549 aa17.09■□□□□ 0.33
AP003721.2-201ENST00000536495 DCAF8L2P0C7V8 631 aa16.42■□□□□ 0.22
AP003721.2-201ENST00000536495 RB1CC1Q8TDY2 1594 aa16.34■□□□□ 0.21
AP003721.2-201ENST00000536495 NACADO15069 1562 aa16.25■□□□□ 0.19
AP003721.2-201ENST00000536495 MYO15BQ96JP2 1530 aa16.03■□□□□ 0.16
AP003721.2-201ENST00000536495 ZCCHC6Q5VYS8 1495 aaKnown RBP16■□□□□ 0.15
AP003721.2-201ENST00000536495 MAPK8IP2Q13387 824 aaPredicted RBP15.98■□□□□ 0.15
AP003721.2-201ENST00000536495 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
AP003721.2-201ENST00000536495 UNC13AQ9UPW8 1703 aa15.93■□□□□ 0.14
AP003721.2-201ENST00000536495 DCAF1Q9Y4B6 1507 aa15.91■□□□□ 0.14
AP003721.2-201ENST00000536495 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
AP003721.2-201ENST00000536495 DMRT2Q9Y5R5 561 aa15.84■□□□□ 0.13
AP003721.2-201ENST00000536495 DNAJC5BQ9UF47 199 aa15.81■□□□□ 0.12
AP003721.2-201ENST00000536495 BICRAQ9NZM4 1560 aa15.78■□□□□ 0.12
AP003721.2-201ENST00000536495 SCRIBQ14160 1630 aa15.75■□□□□ 0.11
AP003721.2-201ENST00000536495 SHROOM4Q9ULL8 1493 aa15.59■□□□□ 0.09
AP003721.2-201ENST00000536495 PPP4R3CPQ6ZMV5 832 aa15.48■□□□□ 0.07
AP003721.2-201ENST00000536495 CC2D2AQ9P2K1 1620 aa15.42■□□□□ 0.06
AP003721.2-201ENST00000536495 EIF4G1Q04637 1599 aaKnown RBP15.41■□□□□ 0.06
AP003721.2-201ENST00000536495 CECR2Q9BXF3 1484 aa15.35■□□□□ 0.05
AP003721.2-201ENST00000536495 DCAF8L1A6NGE4 600 aa15.31■□□□□ 0.04
AP003721.2-201ENST00000536495 HOXD11P31277 338 aaPredicted RBP15.21■□□□□ 0.03
AP003721.2-201ENST00000536495 CNKSR2Q8WXI2 1034 aa15.2■□□□□ 0.02
AP003721.2-201ENST00000536495 CACNB1Q02641 598 aaPredicted RBP15.17■□□□□ 0.02
AP003721.2-201ENST00000536495 RNF216Q9NWF9 866 aaPredicted RBP15.08■□□□□ 0
AP003721.2-201ENST00000536495 SMARCA4P51532 1647 aa15.01□□□□□ -0.01
AP003721.2-201ENST00000536495 BAZ1AQ9NRL2 1556 aaPredicted RBP14.98□□□□□ -0.01
AP003721.2-201ENST00000536495 NCAPD3P42695 1498 aa14.98□□□□□ -0.01
AP003721.2-201ENST00000536495 ATAD2BQ9ULI0 1458 aa14.97□□□□□ -0.01
AP003721.2-201ENST00000536495 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
AP003721.2-201ENST00000536495 RNF39Q9H2S5 420 aa14.93□□□□□ -0.02
AP003721.2-201ENST00000536495 BAZ1BQ9UIG0 1483 aaKnown RBP14.89□□□□□ -0.03
AP003721.2-201ENST00000536495 MROH2BQ7Z745 1585 aa14.88□□□□□ -0.03
AP003721.2-201ENST00000536495 HMGXB3Q12766 1538 aa14.87□□□□□ -0.03
AP003721.2-201ENST00000536495 NCBP3Q53F19 620 aaKnown RBP14.86□□□□□ -0.03
AP003721.2-201ENST00000536495 PEG3Q9GZU2 1588 aa14.81□□□□□ -0.04
AP003721.2-201ENST00000536495 ERCC6Q03468 1493 aa14.78□□□□□ -0.04
AP003721.2-201ENST00000536495 WIZO95785 1651 aa14.73□□□□□ -0.05
AP003721.2-201ENST00000536495 C1QBPQ07021 282 aaKnown RBP14.72□□□□□ -0.05
AP003721.2-201ENST00000536495 NESP48681 1621 aa14.7□□□□□ -0.06
AP003721.2-201ENST00000536495 RSF1Q96T23 1441 aaPredicted RBP14.65□□□□□ -0.06
AP003721.2-201ENST00000536495 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
AP003721.2-201ENST00000536495 NPM3O75607 178 aaKnown RBP14.61□□□□□ -0.07
AP003721.2-201ENST00000536495 CUX2O14529 1486 aa14.6□□□□□ -0.07
AP003721.2-201ENST00000536495 PDS5BQ9NTI5 1447 aa14.58□□□□□ -0.07
AP003721.2-201ENST00000536495 CADPSQ9ULU8 1353 aa14.58□□□□□ -0.08
AP003721.2-201ENST00000536495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.57□□□□□ -0.08
AP003721.2-201ENST00000536495 KIF21AQ7Z4S6 1674 aa14.53□□□□□ -0.08
AP003721.2-201ENST00000536495 TOP2AP11388 1531 aaKnown RBP14.53□□□□□ -0.08
AP003721.2-201ENST00000536495 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
AP003721.2-201ENST00000536495 CFTRP13569 1480 aa14.42□□□□□ -0.1
AP003721.2-201ENST00000536495 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
AP003721.2-201ENST00000536495 FANCD2Q9BXW9 1451 aa14.41□□□□□ -0.1
AP003721.2-201ENST00000536495 MRC2Q9UBG0 1479 aa14.41□□□□□ -0.1
AP003721.2-201ENST00000536495 DNAJC5Q9H3Z4 198 aa14.4□□□□□ -0.1
AP003721.2-201ENST00000536495 CCDC88BA6NC98 1476 aa14.39□□□□□ -0.11
AP003721.2-201ENST00000536495 WDR62O43379 1518 aa14.33□□□□□ -0.12
AP003721.2-201ENST00000536495 SUPT5HO00267 1087 aaKnown RBP14.31□□□□□ -0.12
AP003721.2-201ENST00000536495 PRDM2Q13029 1718 aa14.3□□□□□ -0.12
AP003721.2-201ENST00000536495 URB2Q14146 1524 aaKnown RBP14.25□□□□□ -0.13
AP003721.2-201ENST00000536495 KCNA4P22459 653 aa14.24□□□□□ -0.13
AP003721.2-201ENST00000536495 U3KPZ7 1027 aaPredicted RBP14.19□□□□□ -0.14
AP003721.2-201ENST00000536495 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
AP003721.2-201ENST00000536495 TOPBP1Q92547 1522 aa14.14□□□□□ -0.15
AP003721.2-201ENST00000536495 DNMBPQ6XZF7 1577 aa14.11□□□□□ -0.15
AP003721.2-201ENST00000536495 IFT140Q96RY7 1462 aa14.11□□□□□ -0.15
AP003721.2-201ENST00000536495 CAPN15O75808 1086 aa14.07□□□□□ -0.16
AP003721.2-201ENST00000536495 OSCARQ8IYS5 282 aa14.07□□□□□ -0.16
AP003721.2-201ENST00000536495 SPINK5Q9NQ38 1064 aaPredicted RBP14.05□□□□□ -0.16
AP003721.2-201ENST00000536495 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
AP003721.2-201ENST00000536495 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
AP003721.2-201ENST00000536495 SOGA1O94964 1423 aa14□□□□□ -0.17
AP003721.2-201ENST00000536495 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.17
AP003721.2-201ENST00000536495 EIF4G3O43432 1585 aaKnown RBP13.98□□□□□ -0.17
AP003721.2-201ENST00000536495 SLC4A2P04920 1241 aa13.98□□□□□ -0.17
AP003721.2-201ENST00000536495 FBLN2P98095 1184 aa13.98□□□□□ -0.17
AP003721.2-201ENST00000536495 RAD54L2Q9Y4B4 1467 aa13.98□□□□□ -0.17
AP003721.2-201ENST00000536495 TARBP1Q13395 1621 aaKnown RBP13.97□□□□□ -0.17
AP003721.2-201ENST00000536495 FGD5Q6ZNL6 1462 aa13.97□□□□□ -0.17
AP003721.2-201ENST00000536495 CUX1P39880 1505 aa13.96□□□□□ -0.17
AP003721.2-201ENST00000536495 DSG3P32926 999 aa13.96□□□□□ -0.17
AP003721.2-201ENST00000536495 TRIM41Q8WV44 630 aa13.96□□□□□ -0.17
AP003721.2-201ENST00000536495 TDRD9Q8NDG6 1382 aaKnown RBP13.95□□□□□ -0.18
AP003721.2-201ENST00000536495 CHMP7Q8WUX9 453 aaPredicted RBP13.87□□□□□ -0.19
AP003721.2-201ENST00000536495 CHD1O14646 1710 aa13.86□□□□□ -0.19
AP003721.2-201ENST00000536495 WRNQ14191 1432 aaPredicted RBP eCLIP13.85□□□□□ -0.19
AP003721.2-201ENST00000536495 WDR97A6NE52 1622 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms