RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 NISCHQ9Y2I1 1504 aa9.53□□□□□ -0.88
CTSC-208ENST00000533897 CCDC180Q9P1Z9 1646 aa8.23□□□□□ -1.09
CTSC-208ENST00000533897 ZCCHC6Q5VYS8 1495 aaKnown RBP8.13□□□□□ -1.11
CTSC-208ENST00000533897 DCAF1Q9Y4B6 1507 aa7.96□□□□□ -1.14
CTSC-208ENST00000533897 MYO15BQ96JP2 1530 aa7.8□□□□□ -1.16
CTSC-208ENST00000533897 SHROOM4Q9ULL8 1493 aa7.8□□□□□ -1.16
CTSC-208ENST00000533897 ABCC9O60706 1549 aa7.71□□□□□ -1.17
CTSC-208ENST00000533897 CHIC1Q5VXU3 224 aa7.63□□□□□ -1.19
CTSC-208ENST00000533897 SUPT5HO00267 1087 aaKnown RBP7.59□□□□□ -1.19
CTSC-208ENST00000533897 EIF4G1Q04637 1599 aaKnown RBP7.53□□□□□ -1.2
CTSC-208ENST00000533897 RSF1Q96T23 1441 aaPredicted RBP7.51□□□□□ -1.21
CTSC-208ENST00000533897 RB1CC1Q8TDY2 1594 aa7.51□□□□□ -1.21
CTSC-208ENST00000533897 SCRIBQ14160 1630 aa7.5□□□□□ -1.21
CTSC-208ENST00000533897 HRCP23327 699 aa7.48□□□□□ -1.21
CTSC-208ENST00000533897 NACADO15069 1562 aa7.47□□□□□ -1.21
CTSC-208ENST00000533897 UNC13AQ9UPW8 1703 aa7.42□□□□□ -1.22
CTSC-208ENST00000533897 BAZ1AQ9NRL2 1556 aaPredicted RBP7.41□□□□□ -1.22
CTSC-208ENST00000533897 MROH2BQ7Z745 1585 aa7.39□□□□□ -1.23
CTSC-208ENST00000533897 WIZO95785 1651 aa7.39□□□□□ -1.23
CTSC-208ENST00000533897 CECR2Q9BXF3 1484 aa7.36□□□□□ -1.23
CTSC-208ENST00000533897 LOC105371045A0A1W2PR82 267 aa7.31□□□□□ -1.24
CTSC-208ENST00000533897 DCAF8L2P0C7V8 631 aa7.29□□□□□ -1.24
CTSC-208ENST00000533897 SMARCA4P51532 1647 aa7.28□□□□□ -1.24
CTSC-208ENST00000533897 TOP2AP11388 1531 aaKnown RBP7.28□□□□□ -1.24
CTSC-208ENST00000533897 PCGF6Q9BYE7 350 aa7.28□□□□□ -1.24
CTSC-208ENST00000533897 SMARCA2P51531 1590 aa7.26□□□□□ -1.25
CTSC-208ENST00000533897 PEG3Q9GZU2 1588 aa7.26□□□□□ -1.25
CTSC-208ENST00000533897 PPARGC1BQ86YN6 1023 aaKnown RBP7.23□□□□□ -1.25
CTSC-208ENST00000533897 BICRAQ9NZM4 1560 aa7.23□□□□□ -1.25
CTSC-208ENST00000533897 TRIM26Q12899 539 aaPredicted RBP7.23□□□□□ -1.25
CTSC-208ENST00000533897 WRNQ14191 1432 aaPredicted RBP eCLIP7.18□□□□□ -1.26
CTSC-208ENST00000533897 CCDC88BA6NC98 1476 aa7.18□□□□□ -1.26
CTSC-208ENST00000533897 ABCC8Q09428 1581 aa7.16□□□□□ -1.26
CTSC-208ENST00000533897 TRIM41Q8WV44 630 aa7.12□□□□□ -1.27
CTSC-208ENST00000533897 KIF21BO75037 1637 aa7.1□□□□□ -1.27
CTSC-208ENST00000533897 SYNJ1O43426 1573 aa7.09□□□□□ -1.27
CTSC-208ENST00000533897 BIVM-ERCC5R4GMW8 1640 aa7.07□□□□□ -1.28
CTSC-208ENST00000533897 RUSC2Q8N2Y8 1516 aa7.06□□□□□ -1.28
CTSC-208ENST00000533897 EEA1Q15075 1411 aa7.06□□□□□ -1.28
CTSC-208ENST00000533897 ZEB1P37275 1124 aaPredicted RBP7.05□□□□□ -1.28
CTSC-208ENST00000533897 SOGA1O94964 1423 aa7.05□□□□□ -1.28
CTSC-208ENST00000533897 TNIKQ9UKE5 1360 aa7.04□□□□□ -1.28
CTSC-208ENST00000533897 CEP162Q5TB80 1403 aa7.03□□□□□ -1.28
CTSC-208ENST00000533897 PRDM2Q13029 1718 aa7.02□□□□□ -1.29
CTSC-208ENST00000533897 TOP2BQ02880 1626 aa7.02□□□□□ -1.29
CTSC-208ENST00000533897 ATAD2BQ9ULI0 1458 aa7□□□□□ -1.29
CTSC-208ENST00000533897 BAZ1BQ9UIG0 1483 aaKnown RBP6.99□□□□□ -1.29
CTSC-208ENST00000533897 GOLGA3Q08378 1498 aa6.98□□□□□ -1.29
CTSC-208ENST00000533897 HMGXB3Q12766 1538 aa6.96□□□□□ -1.3
CTSC-208ENST00000533897 FAM9AQ8IZU1 332 aaPredicted RBP6.95□□□□□ -1.3
CTSC-208ENST00000533897 ERICH3Q5RHP9 1530 aa6.95□□□□□ -1.3
CTSC-208ENST00000533897 CEP164Q9UPV0 1460 aa6.94□□□□□ -1.3
CTSC-208ENST00000533897 SCAF1Q9H7N4 1312 aaKnown RBP6.93□□□□□ -1.3
CTSC-208ENST00000533897 PRXQ9BXM0 1461 aa6.91□□□□□ -1.3
CTSC-208ENST00000533897 RAPGEF2Q9Y4G8 1499 aa6.9□□□□□ -1.3
CTSC-208ENST00000533897 VPS8Q8N3P4 1428 aa6.89□□□□□ -1.31
CTSC-208ENST00000533897 CLIP1P30622 1438 aa6.89□□□□□ -1.31
CTSC-208ENST00000533897 CUX1P39880 1505 aa6.89□□□□□ -1.31
CTSC-208ENST00000533897 CSRNP3Q8WYN3 585 aa6.89□□□□□ -1.31
CTSC-208ENST00000533897 ARAP1Q96P48 1450 aa6.89□□□□□ -1.31
CTSC-208ENST00000533897 CUX2O14529 1486 aa6.88□□□□□ -1.31
CTSC-208ENST00000533897 NCAPD3P42695 1498 aa6.88□□□□□ -1.31
CTSC-208ENST00000533897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.85□□□□□ -1.31
CTSC-208ENST00000533897 CFTRP13569 1480 aa6.84□□□□□ -1.31
CTSC-208ENST00000533897 RRBP1Q9P2E9 1410 aaKnown RBP6.82□□□□□ -1.32
CTSC-208ENST00000533897 CFAP43Q8NDM7 1665 aa6.82□□□□□ -1.32
CTSC-208ENST00000533897 MAP3K1Q13233 1512 aa6.81□□□□□ -1.32
CTSC-208ENST00000533897 WDR97A6NE52 1622 aa6.8□□□□□ -1.32
CTSC-208ENST00000533897 ACIN1Q9UKV3 1341 aaKnown RBP6.79□□□□□ -1.32
CTSC-208ENST00000533897 EHMT2Q96KQ7 1210 aa6.79□□□□□ -1.32
CTSC-208ENST00000533897 ARHGAP35Q9NRY4 1499 aa6.78□□□□□ -1.32
CTSC-208ENST00000533897 NEUROD1Q13562 356 aa6.78□□□□□ -1.32
CTSC-208ENST00000533897 PABPN1Q86U42 306 aaKnown RBP eCLIP6.78□□□□□ -1.32
CTSC-208ENST00000533897 LRRIQ1Q96JM4 1722 aa6.77□□□□□ -1.33
CTSC-208ENST00000533897 CCER1Q8TC90 406 aaPredicted RBP6.76□□□□□ -1.33
CTSC-208ENST00000533897 TIAM1Q13009 1591 aa6.76□□□□□ -1.33
CTSC-208ENST00000533897 MAPKBP1O60336 1514 aa6.76□□□□□ -1.33
CTSC-208ENST00000533897 DHX57Q6P158 1386 aaKnown RBP6.75□□□□□ -1.33
CTSC-208ENST00000533897 DIEXFQ68CQ4 756 aaKnown RBP6.74□□□□□ -1.33
CTSC-208ENST00000533897 PELP1Q8IZL8 1130 aaKnown RBP6.74□□□□□ -1.33
CTSC-208ENST00000533897 CTTNBP2Q8WZ74 1663 aa6.74□□□□□ -1.33
CTSC-208ENST00000533897 CLSPNQ9HAW4 1339 aa6.73□□□□□ -1.33
CTSC-208ENST00000533897 ZNF316A6NFI3 1004 aaPredicted RBP6.72□□□□□ -1.33
CTSC-208ENST00000533897 CC2D2AQ9P2K1 1620 aa6.71□□□□□ -1.33
CTSC-208ENST00000533897 KIF27Q86VH2 1401 aa6.71□□□□□ -1.34
CTSC-208ENST00000533897 PCF11O94913 1555 aaKnown RBP6.7□□□□□ -1.34
CTSC-208ENST00000533897 CUL7Q14999 1698 aa6.69□□□□□ -1.34
CTSC-208ENST00000533897 UBTFP17480 764 aaKnown RBP6.69□□□□□ -1.34
CTSC-208ENST00000533897 IGF1RP08069 1367 aa6.69□□□□□ -1.34
CTSC-208ENST00000533897 SAMD9Q5K651 1589 aa6.69□□□□□ -1.34
CTSC-208ENST00000533897 ABCA5Q8WWZ7 1642 aa6.69□□□□□ -1.34
CTSC-208ENST00000533897 DNMBPQ6XZF7 1577 aa6.68□□□□□ -1.34
CTSC-208ENST00000533897 KANK4Q5T7N3 995 aaPredicted RBP6.68□□□□□ -1.34
CTSC-208ENST00000533897 FGD5Q6ZNL6 1462 aa6.68□□□□□ -1.34
CTSC-208ENST00000533897 ABCA10Q8WWZ4 1543 aa6.67□□□□□ -1.34
CTSC-208ENST00000533897 KIF21AQ7Z4S6 1674 aa6.67□□□□□ -1.34
CTSC-208ENST00000533897 AQRO60306 1485 aaKnown RBP eCLIP6.67□□□□□ -1.341e-6■■■■■ 31.8
CTSC-208ENST00000533897 LRRC9Q6ZRR7 1453 aa6.67□□□□□ -1.34
CTSC-208ENST00000533897 EFCAB5A4FU69 1503 aa6.66□□□□□ -1.34
CTSC-208ENST00000533897 KDM5BQ9UGL1 1544 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms