RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 AEBP2Q6ZN18 517 aaPredicted RBP26.63■■□□□ 1.85
BEST3-207ENST00000533674 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
BEST3-207ENST00000533674 SENP3Q9H4L4 574 aaPredicted RBP22.68■■□□□ 1.22
BEST3-207ENST00000533674 NISCHQ9Y2I1 1504 aa22.67■■□□□ 1.22
BEST3-207ENST00000533674 PHF23Q9BUL5 403 aaPredicted RBP22.51■■□□□ 1.19
BEST3-207ENST00000533674 FOXD1Q16676 465 aa21.09■□□□□ 0.97
BEST3-207ENST00000533674 PLPPR3Q6T4P5 718 aa20.67■□□□□ 0.9
BEST3-207ENST00000533674 ABCC9O60706 1549 aa20.64■□□□□ 0.9
BEST3-207ENST00000533674 CCDC180Q9P1Z9 1646 aa20.47■□□□□ 0.87
BEST3-207ENST00000533674 PPP6R1Q9UPN7 881 aa19.97■□□□□ 0.79
BEST3-207ENST00000533674 ADRA2BP18089 450 aa19.92■□□□□ 0.78
BEST3-207ENST00000533674 PIAS4Q8N2W9 510 aaPredicted RBP19.78■□□□□ 0.76
BEST3-207ENST00000533674 MSH5O43196 834 aa19.61■□□□□ 0.73
BEST3-207ENST00000533674 RB1CC1Q8TDY2 1594 aa19.59■□□□□ 0.73
BEST3-207ENST00000533674 DNAJC5BQ9UF47 199 aa19.41■□□□□ 0.7
BEST3-207ENST00000533674 NACADO15069 1562 aa19.37■□□□□ 0.69
BEST3-207ENST00000533674 DCAF8L2P0C7V8 631 aa19.34■□□□□ 0.69
BEST3-207ENST00000533674 PABPN1Q86U42 306 aaKnown RBP eCLIP19.18■□□□□ 0.66
BEST3-207ENST00000533674 UNC13AQ9UPW8 1703 aa19.11■□□□□ 0.65
BEST3-207ENST00000533674 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
BEST3-207ENST00000533674 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
BEST3-207ENST00000533674 ZCCHC6Q5VYS8 1495 aaKnown RBP18.75■□□□□ 0.59
BEST3-207ENST00000533674 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
BEST3-207ENST00000533674 DCAF1Q9Y4B6 1507 aa18.69■□□□□ 0.58
BEST3-207ENST00000533674 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
BEST3-207ENST00000533674 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
BEST3-207ENST00000533674 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
BEST3-207ENST00000533674 EIF4G1Q04637 1599 aaKnown RBP18.54■□□□□ 0.56
BEST3-207ENST00000533674 POTEDQ86YR6 584 aa18.5■□□□□ 0.55
BEST3-207ENST00000533674 SCAF1Q9H7N4 1312 aaKnown RBP18.26■□□□□ 0.51
BEST3-207ENST00000533674 MAPK8IP2Q13387 824 aaPredicted RBP18.18■□□□□ 0.5
BEST3-207ENST00000533674 PPP4R3CPQ6ZMV5 832 aa18.15■□□□□ 0.5
BEST3-207ENST00000533674 DMRT2Q9Y5R5 561 aa18.05■□□□□ 0.48
BEST3-207ENST00000533674 DNAJC5Q9H3Z4 198 aa18■□□□□ 0.47
BEST3-207ENST00000533674 ERCC6Q03468 1493 aa17.9■□□□□ 0.46
BEST3-207ENST00000533674 CUX2O14529 1486 aa17.86■□□□□ 0.45
BEST3-207ENST00000533674 NCAPD3P42695 1498 aa17.84■□□□□ 0.45
BEST3-207ENST00000533674 SMARCA2P51531 1590 aa17.78■□□□□ 0.44
BEST3-207ENST00000533674 ATAD2BQ9ULI0 1458 aa17.77■□□□□ 0.44
BEST3-207ENST00000533674 SMARCA4P51532 1647 aa17.76■□□□□ 0.43
BEST3-207ENST00000533674 HMGXB3Q12766 1538 aa17.74■□□□□ 0.43
BEST3-207ENST00000533674 CNKSR2Q8WXI2 1034 aa17.74■□□□□ 0.43
BEST3-207ENST00000533674 BAZ1BQ9UIG0 1483 aaKnown RBP17.67■□□□□ 0.42
BEST3-207ENST00000533674 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
BEST3-207ENST00000533674 NESP48681 1621 aa17.65■□□□□ 0.42
BEST3-207ENST00000533674 NCBP3Q53F19 620 aaKnown RBP17.57■□□□□ 0.4
BEST3-207ENST00000533674 PEG3Q9GZU2 1588 aa17.53■□□□□ 0.4
BEST3-207ENST00000533674 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
BEST3-207ENST00000533674 HOXD11P31277 338 aaPredicted RBP17.53■□□□□ 0.4
BEST3-207ENST00000533674 THOC2Q8NI27 1593 aaKnown RBP17.52■□□□□ 0.39
BEST3-207ENST00000533674 RNF216Q9NWF9 866 aaPredicted RBP17.5■□□□□ 0.39
BEST3-207ENST00000533674 KIF21AQ7Z4S6 1674 aa17.46■□□□□ 0.39
BEST3-207ENST00000533674 MROH2BQ7Z745 1585 aa17.46■□□□□ 0.39
BEST3-207ENST00000533674 PDS5BQ9NTI5 1447 aa17.45■□□□□ 0.38
BEST3-207ENST00000533674 CADPSQ9ULU8 1353 aa17.32■□□□□ 0.36
BEST3-207ENST00000533674 NPM3O75607 178 aaKnown RBP17.32■□□□□ 0.36
BEST3-207ENST00000533674 MRC2Q9UBG0 1479 aa17.31■□□□□ 0.36
BEST3-207ENST00000533674 KCNA4P22459 653 aa17.29■□□□□ 0.36
BEST3-207ENST00000533674 WIZO95785 1651 aa17.28■□□□□ 0.36
BEST3-207ENST00000533674 TRIM41Q8WV44 630 aa17.26■□□□□ 0.35
BEST3-207ENST00000533674 WDR62O43379 1518 aa17.24■□□□□ 0.35
BEST3-207ENST00000533674 DCAF8L1A6NGE4 600 aa17.23■□□□□ 0.35
BEST3-207ENST00000533674 CEP164Q9UPV0 1460 aa17.22■□□□□ 0.35
BEST3-207ENST00000533674 FANCD2Q9BXW9 1451 aa17.15■□□□□ 0.34
BEST3-207ENST00000533674 CFTRP13569 1480 aa17.07■□□□□ 0.32
BEST3-207ENST00000533674 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
BEST3-207ENST00000533674 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
BEST3-207ENST00000533674 RSF1Q96T23 1441 aaPredicted RBP17.03■□□□□ 0.32
BEST3-207ENST00000533674 URB2Q14146 1524 aaKnown RBP17■□□□□ 0.31
BEST3-207ENST00000533674 PRDM2Q13029 1718 aa16.96■□□□□ 0.31
BEST3-207ENST00000533674 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
BEST3-207ENST00000533674 CCDC88BA6NC98 1476 aa16.83■□□□□ 0.28
BEST3-207ENST00000533674 RIMBP3CA6NJZ7 1639 aa16.82■□□□□ 0.28
BEST3-207ENST00000533674 RIMBP3BA6NNM3 1639 aa16.82■□□□□ 0.28
BEST3-207ENST00000533674 RIMBP3Q9UFD9 1639 aa16.82■□□□□ 0.28
BEST3-207ENST00000533674 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
BEST3-207ENST00000533674 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
BEST3-207ENST00000533674 ABCC8Q09428 1581 aa16.77■□□□□ 0.28
BEST3-207ENST00000533674 EIF4G3O43432 1585 aaKnown RBP16.77■□□□□ 0.27
BEST3-207ENST00000533674 RNF39Q9H2S5 420 aa16.76■□□□□ 0.27
BEST3-207ENST00000533674 DNMBPQ6XZF7 1577 aa16.74■□□□□ 0.27
BEST3-207ENST00000533674 ARHGEF11O15085 1522 aa16.74■□□□□ 0.27
BEST3-207ENST00000533674 CHD1O14646 1710 aa16.68■□□□□ 0.26
BEST3-207ENST00000533674 FBLN2P98095 1184 aa16.67■□□□□ 0.26
BEST3-207ENST00000533674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.67■□□□□ 0.26
BEST3-207ENST00000533674 AQRO60306 1485 aaKnown RBP eCLIP16.66■□□□□ 0.26
BEST3-207ENST00000533674 CYB5RLQ6IPT4 315 aa16.65■□□□□ 0.26
BEST3-207ENST00000533674 TARBP1Q13395 1621 aaKnown RBP16.64■□□□□ 0.25
BEST3-207ENST00000533674 POLA1P09884 1462 aaPredicted RBP16.61■□□□□ 0.25
BEST3-207ENST00000533674 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
BEST3-207ENST00000533674 CACNB1Q02641 598 aaPredicted RBP16.57■□□□□ 0.24
BEST3-207ENST00000533674 RAD54L2Q9Y4B4 1467 aa16.55■□□□□ 0.24
BEST3-207ENST00000533674 SOGA1O94964 1423 aa16.54■□□□□ 0.24
BEST3-207ENST00000533674 C1QBPQ07021 282 aaKnown RBP16.54■□□□□ 0.24
BEST3-207ENST00000533674 ARAP1Q96P48 1450 aa16.54■□□□□ 0.24
BEST3-207ENST00000533674 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
BEST3-207ENST00000533674 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
BEST3-207ENST00000533674 FGD5Q6ZNL6 1462 aa16.5■□□□□ 0.23
BEST3-207ENST00000533674 WDR97A6NE52 1622 aa16.49■□□□□ 0.23
BEST3-207ENST00000533674 CHMP7Q8WUX9 453 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms