RNA–Protein interactions for RNA: ENST00000532335.5

RAET1E-207, retinoic acid early transcript 1E, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAET1E, Length 2,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAET1E-207ENST00000532335 NISCHQ9Y2I1 1504 aa20.36■□□□□ 0.85
RAET1E-207ENST00000532335 AEBP2Q6ZN18 517 aaPredicted RBP19.72■□□□□ 0.75
RAET1E-207ENST00000532335 CHIC1Q5VXU3 224 aa19.44■□□□□ 0.7
RAET1E-207ENST00000532335 CCDC180Q9P1Z9 1646 aa17.62■□□□□ 0.41
RAET1E-207ENST00000532335 ABCC9O60706 1549 aa17.41■□□□□ 0.38
RAET1E-207ENST00000532335 PHF23Q9BUL5 403 aaPredicted RBP17.36■□□□□ 0.37
RAET1E-207ENST00000532335 ZCCHC6Q5VYS8 1495 aaKnown RBP17.13■□□□□ 0.33
RAET1E-207ENST00000532335 SHROOM4Q9ULL8 1493 aa17.13■□□□□ 0.33
RAET1E-207ENST00000532335 DCAF8L2P0C7V8 631 aa17.08■□□□□ 0.33
RAET1E-207ENST00000532335 DCAF1Q9Y4B6 1507 aa16.69■□□□□ 0.26
RAET1E-207ENST00000532335 SUPT5HO00267 1087 aaKnown RBP16.67■□□□□ 0.26
RAET1E-207ENST00000532335 RB1CC1Q8TDY2 1594 aa16.63■□□□□ 0.25
RAET1E-207ENST00000532335 NACADO15069 1562 aa16.57■□□□□ 0.24
RAET1E-207ENST00000532335 MYO15BQ96JP2 1530 aa16.4■□□□□ 0.22
RAET1E-207ENST00000532335 UNC13AQ9UPW8 1703 aa16.35■□□□□ 0.21
RAET1E-207ENST00000532335 SCRIBQ14160 1630 aa16.35■□□□□ 0.21
RAET1E-207ENST00000532335 SENP3Q9H4L4 574 aaPredicted RBP16.31■□□□□ 0.2
RAET1E-207ENST00000532335 PABPN1Q86U42 306 aaKnown RBP eCLIP16.27■□□□□ 0.2
RAET1E-207ENST00000532335 BICRAQ9NZM4 1560 aa16.19■□□□□ 0.18
RAET1E-207ENST00000532335 DNAJC5BQ9UF47 199 aa16.11■□□□□ 0.17
RAET1E-207ENST00000532335 HRCP23327 699 aa15.97■□□□□ 0.15
RAET1E-207ENST00000532335 RSF1Q96T23 1441 aaPredicted RBP15.96■□□□□ 0.15
RAET1E-207ENST00000532335 CECR2Q9BXF3 1484 aa15.91■□□□□ 0.14
RAET1E-207ENST00000532335 PCGF6Q9BYE7 350 aa15.88■□□□□ 0.13
RAET1E-207ENST00000532335 PLPPR3Q6T4P5 718 aa15.85■□□□□ 0.13
RAET1E-207ENST00000532335 MROH2BQ7Z745 1585 aa15.81■□□□□ 0.12
RAET1E-207ENST00000532335 LOC105371045A0A1W2PR82 267 aa15.79■□□□□ 0.12
RAET1E-207ENST00000532335 EIF4G1Q04637 1599 aaKnown RBP15.75■□□□□ 0.11
RAET1E-207ENST00000532335 CC2D2AQ9P2K1 1620 aa15.73■□□□□ 0.11
RAET1E-207ENST00000532335 WIZO95785 1651 aa15.71■□□□□ 0.11
RAET1E-207ENST00000532335 BAZ1AQ9NRL2 1556 aaPredicted RBP15.68■□□□□ 0.1
RAET1E-207ENST00000532335 PPARGC1BQ86YN6 1023 aaKnown RBP15.59■□□□□ 0.09
RAET1E-207ENST00000532335 SMARCA4P51532 1647 aa15.59■□□□□ 0.09
RAET1E-207ENST00000532335 TRIM26Q12899 539 aaPredicted RBP15.57■□□□□ 0.08
RAET1E-207ENST00000532335 TRIM41Q8WV44 630 aa15.53■□□□□ 0.08
RAET1E-207ENST00000532335 TOP2AP11388 1531 aaKnown RBP15.46■□□□□ 0.07
RAET1E-207ENST00000532335 FAM9AQ8IZU1 332 aaPredicted RBP15.4■□□□□ 0.06
RAET1E-207ENST00000532335 CCDC88BA6NC98 1476 aa15.39■□□□□ 0.05
RAET1E-207ENST00000532335 SMARCA2P51531 1590 aa15.36■□□□□ 0.05
RAET1E-207ENST00000532335 ZEB1P37275 1124 aaPredicted RBP15.35■□□□□ 0.05
RAET1E-207ENST00000532335 PELP1Q8IZL8 1130 aaKnown RBP15.35■□□□□ 0.05
RAET1E-207ENST00000532335 FOXD1Q16676 465 aa15.32■□□□□ 0.04
RAET1E-207ENST00000532335 ATAD2BQ9ULI0 1458 aa15.32■□□□□ 0.04
RAET1E-207ENST00000532335 NCAPD3P42695 1498 aa15.3■□□□□ 0.04
RAET1E-207ENST00000532335 EHMT2Q96KQ7 1210 aa15.29■□□□□ 0.04
RAET1E-207ENST00000532335 PEG3Q9GZU2 1588 aa15.28■□□□□ 0.04
RAET1E-207ENST00000532335 BAZ1BQ9UIG0 1483 aaKnown RBP15.24■□□□□ 0.03
RAET1E-207ENST00000532335 ABCC8Q09428 1581 aa15.23■□□□□ 0.03
RAET1E-207ENST00000532335 PPP6R1Q9UPN7 881 aa15.22■□□□□ 0.03
RAET1E-207ENST00000532335 HMGXB3Q12766 1538 aa15.21■□□□□ 0.03
RAET1E-207ENST00000532335 ADRA2BP18089 450 aa15.19■□□□□ 0.02
RAET1E-207ENST00000532335 NESP48681 1621 aa15.06■□□□□ 0
RAET1E-207ENST00000532335 WRNQ14191 1432 aaPredicted RBP eCLIP15.03■□□□□ -0
RAET1E-207ENST00000532335 EEA1Q15075 1411 aa15.03■□□□□ -0
RAET1E-207ENST00000532335 SOGA1O94964 1423 aa15.01□□□□□ -0.01
RAET1E-207ENST00000532335 ERCC6Q03468 1493 aa14.98□□□□□ -0.01
RAET1E-207ENST00000532335 RUSC2Q8N2Y8 1516 aa14.95□□□□□ -0.02
RAET1E-207ENST00000532335 SYNJ1O43426 1573 aa14.95□□□□□ -0.02
RAET1E-207ENST00000532335 TNIKQ9UKE5 1360 aa14.93□□□□□ -0.02
RAET1E-207ENST00000532335 CEP162Q5TB80 1403 aa14.93□□□□□ -0.02
RAET1E-207ENST00000532335 LAMC3Q9Y6N6 1575 aa14.92□□□□□ -0.02
RAET1E-207ENST00000532335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
RAET1E-207ENST00000532335 CSRNP3Q8WYN3 585 aa14.91□□□□□ -0.02
RAET1E-207ENST00000532335 CCER1Q8TC90 406 aaPredicted RBP14.89□□□□□ -0.03
RAET1E-207ENST00000532335 KIF21AQ7Z4S6 1674 aa14.87□□□□□ -0.03
RAET1E-207ENST00000532335 MYT1Q01538 1121 aa14.87□□□□□ -0.03
RAET1E-207ENST00000532335 CADPSQ9ULU8 1353 aa14.86□□□□□ -0.03
RAET1E-207ENST00000532335 GOLGA3Q08378 1498 aa14.86□□□□□ -0.03
RAET1E-207ENST00000532335 UBTFP17480 764 aaKnown RBP14.85□□□□□ -0.03
RAET1E-207ENST00000532335 CFTRP13569 1480 aa14.82□□□□□ -0.04
RAET1E-207ENST00000532335 CUX2O14529 1486 aa14.81□□□□□ -0.04
RAET1E-207ENST00000532335 PDS5BQ9NTI5 1447 aa14.81□□□□□ -0.04
RAET1E-207ENST00000532335 THOC2Q8NI27 1593 aaKnown RBP14.81□□□□□ -0.04
RAET1E-207ENST00000532335 KIF21BO75037 1637 aa14.81□□□□□ -0.04
RAET1E-207ENST00000532335 TTBK1Q5TCY1 1321 aaPredicted RBP14.8□□□□□ -0.04
RAET1E-207ENST00000532335 TOP2BQ02880 1626 aa14.8□□□□□ -0.04
RAET1E-207ENST00000532335 CEP164Q9UPV0 1460 aa14.77□□□□□ -0.04
RAET1E-207ENST00000532335 SCAF1Q9H7N4 1312 aaKnown RBP14.77□□□□□ -0.05
RAET1E-207ENST00000532335 CUX1P39880 1505 aa14.74□□□□□ -0.05
RAET1E-207ENST00000532335 BIVM-ERCC5R4GMW8 1640 aa14.74□□□□□ -0.05
RAET1E-207ENST00000532335 FANCD2Q9BXW9 1451 aa14.71□□□□□ -0.05
RAET1E-207ENST00000532335 MRC2Q9UBG0 1479 aa14.69□□□□□ -0.06
RAET1E-207ENST00000532335 RANGAP1P46060 587 aaPredicted RBP14.69□□□□□ -0.06
RAET1E-207ENST00000532335 PRDM2Q13029 1718 aa14.67□□□□□ -0.06
RAET1E-207ENST00000532335 DIEXFQ68CQ4 756 aaKnown RBP14.66□□□□□ -0.06
RAET1E-207ENST00000532335 RAPGEF2Q9Y4G8 1499 aa14.66□□□□□ -0.06
RAET1E-207ENST00000532335 WDR62O43379 1518 aa14.64□□□□□ -0.07
RAET1E-207ENST00000532335 CLIP1P30622 1438 aa14.64□□□□□ -0.07
RAET1E-207ENST00000532335 VPS8Q8N3P4 1428 aa14.62□□□□□ -0.07
RAET1E-207ENST00000532335 ACIN1Q9UKV3 1341 aaKnown RBP14.62□□□□□ -0.07
RAET1E-207ENST00000532335 KIF27Q86VH2 1401 aa14.6□□□□□ -0.07
RAET1E-207ENST00000532335 URB2Q14146 1524 aaKnown RBP14.6□□□□□ -0.07
RAET1E-207ENST00000532335 NEUROD1Q13562 356 aa14.57□□□□□ -0.08
RAET1E-207ENST00000532335 ERICH3Q5RHP9 1530 aa14.56□□□□□ -0.08
RAET1E-207ENST00000532335 FGD5Q6ZNL6 1462 aa14.56□□□□□ -0.08
RAET1E-207ENST00000532335 PRXQ9BXM0 1461 aa14.54□□□□□ -0.08
RAET1E-207ENST00000532335 ZNF316A6NFI3 1004 aaPredicted RBP14.53□□□□□ -0.08
RAET1E-207ENST00000532335 CENPBP07199 599 aaPredicted RBP14.53□□□□□ -0.08
RAET1E-207ENST00000532335 APLP2Q06481 763 aa14.52□□□□□ -0.09
RAET1E-207ENST00000532335 HNRNPUL2Q1KMD3 747 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms