RNA–Protein interactions for RNA: ENST00000531298.5

PACS1-211, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-211ENST00000531298 AEBP2Q6ZN18 517 aaPredicted RBP17.36■□□□□ 0.37
PACS1-211ENST00000531298 NISCHQ9Y2I1 1504 aa16.71■□□□□ 0.27
PACS1-211ENST00000531298 CHIC1Q5VXU3 224 aa16.7■□□□□ 0.26
PACS1-211ENST00000531298 SENP3Q9H4L4 574 aaPredicted RBP14.85□□□□□ -0.03
PACS1-211ENST00000531298 PHF23Q9BUL5 403 aaPredicted RBP14.75□□□□□ -0.05
PACS1-211ENST00000531298 CCDC180Q9P1Z9 1646 aa14.61□□□□□ -0.07
PACS1-211ENST00000531298 POTEDQ86YR6 584 aa14.21□□□□□ -0.13
PACS1-211ENST00000531298 ZCCHC6Q5VYS8 1495 aaKnown RBP14.11□□□□□ -0.15
PACS1-211ENST00000531298 DCAF1Q9Y4B6 1507 aa14.01□□□□□ -0.17
PACS1-211ENST00000531298 FOXD1Q16676 465 aa13.93□□□□□ -0.18
PACS1-211ENST00000531298 MYO15BQ96JP2 1530 aa13.82□□□□□ -0.2
PACS1-211ENST00000531298 NACADO15069 1562 aa13.54□□□□□ -0.24
PACS1-211ENST00000531298 PLPPR3Q6T4P5 718 aa13.41□□□□□ -0.26
PACS1-211ENST00000531298 SHROOM4Q9ULL8 1493 aa13.4□□□□□ -0.26
PACS1-211ENST00000531298 DCAF8L2P0C7V8 631 aa13.36□□□□□ -0.27
PACS1-211ENST00000531298 MSH5O43196 834 aa13.31□□□□□ -0.28
PACS1-211ENST00000531298 RB1CC1Q8TDY2 1594 aa13.3□□□□□ -0.28
PACS1-211ENST00000531298 ABCC9O60706 1549 aa13.29□□□□□ -0.28
PACS1-211ENST00000531298 SCRIBQ14160 1630 aa13.17□□□□□ -0.3
PACS1-211ENST00000531298 PPP6R1Q9UPN7 881 aa13.08□□□□□ -0.32
PACS1-211ENST00000531298 SUPT5HO00267 1087 aaKnown RBP13.05□□□□□ -0.32
PACS1-211ENST00000531298 RSF1Q96T23 1441 aaPredicted RBP12.99□□□□□ -0.33
PACS1-211ENST00000531298 ADRA2BP18089 450 aa12.99□□□□□ -0.33
PACS1-211ENST00000531298 UNC13AQ9UPW8 1703 aa12.96□□□□□ -0.33
PACS1-211ENST00000531298 BAZ1AQ9NRL2 1556 aaPredicted RBP12.93□□□□□ -0.34
PACS1-211ENST00000531298 BICRAQ9NZM4 1560 aa12.83□□□□□ -0.36
PACS1-211ENST00000531298 PIAS4Q8N2W9 510 aaPredicted RBP12.82□□□□□ -0.36
PACS1-211ENST00000531298 CECR2Q9BXF3 1484 aa12.82□□□□□ -0.36
PACS1-211ENST00000531298 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
PACS1-211ENST00000531298 SMARCA4P51532 1647 aa12.78□□□□□ -0.36
PACS1-211ENST00000531298 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.37
PACS1-211ENST00000531298 TOP2AP11388 1531 aaKnown RBP12.71□□□□□ -0.38
PACS1-211ENST00000531298 WIZO95785 1651 aa12.7□□□□□ -0.38
PACS1-211ENST00000531298 SMARCA2P51531 1590 aa12.6□□□□□ -0.39
PACS1-211ENST00000531298 EIF4G1Q04637 1599 aaKnown RBP12.56□□□□□ -0.4
PACS1-211ENST00000531298 ATAD2BQ9ULI0 1458 aa12.52□□□□□ -0.41
PACS1-211ENST00000531298 CCDC88BA6NC98 1476 aa12.5□□□□□ -0.41
PACS1-211ENST00000531298 HMGXB3Q12766 1538 aa12.48□□□□□ -0.41
PACS1-211ENST00000531298 PABPN1Q86U42 306 aaKnown RBP eCLIP12.48□□□□□ -0.41
PACS1-211ENST00000531298 NCAPD3P42695 1498 aa12.46□□□□□ -0.42
PACS1-211ENST00000531298 BAZ1BQ9UIG0 1483 aaKnown RBP12.43□□□□□ -0.42
PACS1-211ENST00000531298 TRIM41Q8WV44 630 aa12.4□□□□□ -0.42
PACS1-211ENST00000531298 EEA1Q15075 1411 aa12.33□□□□□ -0.44
PACS1-211ENST00000531298 WRNQ14191 1432 aaPredicted RBP eCLIP12.23□□□□□ -0.45
PACS1-211ENST00000531298 PRDM2Q13029 1718 aa12.23□□□□□ -0.45
PACS1-211ENST00000531298 CFTRP13569 1480 aa12.21□□□□□ -0.46
PACS1-211ENST00000531298 ABCC8Q09428 1581 aa12.18□□□□□ -0.46
PACS1-211ENST00000531298 BIVM-ERCC5R4GMW8 1640 aa12.17□□□□□ -0.46
PACS1-211ENST00000531298 TOP2BQ02880 1626 aa12.16□□□□□ -0.46
PACS1-211ENST00000531298 CC2D2AQ9P2K1 1620 aa12.15□□□□□ -0.47
PACS1-211ENST00000531298 SYNJ1O43426 1573 aa12.11□□□□□ -0.47
PACS1-211ENST00000531298 LOC105371045A0A1W2PR82 267 aa12.11□□□□□ -0.47
PACS1-211ENST00000531298 KIF21BO75037 1637 aa12.08□□□□□ -0.48
PACS1-211ENST00000531298 CADPSQ9ULU8 1353 aa12.08□□□□□ -0.48
PACS1-211ENST00000531298 TNIKQ9UKE5 1360 aa12.06□□□□□ -0.48
PACS1-211ENST00000531298 CSRNP3Q8WYN3 585 aa12.05□□□□□ -0.48
PACS1-211ENST00000531298 GOLGA3Q08378 1498 aa12.03□□□□□ -0.48
PACS1-211ENST00000531298 CEP164Q9UPV0 1460 aa12.03□□□□□ -0.48
PACS1-211ENST00000531298 SOGA1O94964 1423 aa12.03□□□□□ -0.48
PACS1-211ENST00000531298 ERICH3Q5RHP9 1530 aa12□□□□□ -0.49
PACS1-211ENST00000531298 LAMC3Q9Y6N6 1575 aa12□□□□□ -0.49
PACS1-211ENST00000531298 CUX1P39880 1505 aa11.99□□□□□ -0.49
PACS1-211ENST00000531298 TRIM26Q12899 539 aaPredicted RBP11.95□□□□□ -0.5
PACS1-211ENST00000531298 FAM9AQ8IZU1 332 aaPredicted RBP11.95□□□□□ -0.5
PACS1-211ENST00000531298 KIF27Q86VH2 1401 aa11.94□□□□□ -0.5
PACS1-211ENST00000531298 RUSC2Q8N2Y8 1516 aa11.93□□□□□ -0.5
PACS1-211ENST00000531298 PRXQ9BXM0 1461 aa11.93□□□□□ -0.5
PACS1-211ENST00000531298 CEP162Q5TB80 1403 aa11.91□□□□□ -0.5
PACS1-211ENST00000531298 DNMBPQ6XZF7 1577 aa11.91□□□□□ -0.5
PACS1-211ENST00000531298 FANCD2Q9BXW9 1451 aa11.9□□□□□ -0.5
PACS1-211ENST00000531298 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
PACS1-211ENST00000531298 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
PACS1-211ENST00000531298 ABCA10Q8WWZ4 1543 aa11.83□□□□□ -0.52
PACS1-211ENST00000531298 PPP4R3CPQ6ZMV5 832 aa11.83□□□□□ -0.52
PACS1-211ENST00000531298 FGD5Q6ZNL6 1462 aa11.83□□□□□ -0.52
PACS1-211ENST00000531298 CACNB1Q02641 598 aaPredicted RBP11.82□□□□□ -0.52
PACS1-211ENST00000531298 TOPBP1Q92547 1522 aa11.81□□□□□ -0.52
PACS1-211ENST00000531298 RAPGEF2Q9Y4G8 1499 aa11.81□□□□□ -0.52
PACS1-211ENST00000531298 UBTFP17480 764 aaKnown RBP11.8□□□□□ -0.52
PACS1-211ENST00000531298 PCGF6Q9BYE7 350 aa11.8□□□□□ -0.52
PACS1-211ENST00000531298 CLIP1P30622 1438 aa11.78□□□□□ -0.52
PACS1-211ENST00000531298 HRCP23327 699 aa11.77□□□□□ -0.53
PACS1-211ENST00000531298 SCAF1Q9H7N4 1312 aaKnown RBP11.77□□□□□ -0.53
PACS1-211ENST00000531298 CUL7Q14999 1698 aa11.77□□□□□ -0.53
PACS1-211ENST00000531298 IGF1RP08069 1367 aa11.77□□□□□ -0.53
PACS1-211ENST00000531298 VPS8Q8N3P4 1428 aa11.77□□□□□ -0.53
PACS1-211ENST00000531298 CUX2O14529 1486 aa11.76□□□□□ -0.53
PACS1-211ENST00000531298 WDR97A6NE52 1622 aa11.76□□□□□ -0.53
PACS1-211ENST00000531298 POLA1P09884 1462 aaPredicted RBP11.76□□□□□ -0.53
PACS1-211ENST00000531298 NESP48681 1621 aa11.72□□□□□ -0.53
PACS1-211ENST00000531298 URB2Q14146 1524 aaKnown RBP11.71□□□□□ -0.53
PACS1-211ENST00000531298 ZEB1P37275 1124 aaPredicted RBP11.71□□□□□ -0.53
PACS1-211ENST00000531298 CARMIL1Q5VZK9 1371 aa11.7□□□□□ -0.54
PACS1-211ENST00000531298 DMRT2Q9Y5R5 561 aa11.7□□□□□ -0.54
PACS1-211ENST00000531298 ABCA5Q8WWZ7 1642 aa11.7□□□□□ -0.54
PACS1-211ENST00000531298 MAP3K1Q13233 1512 aa11.69□□□□□ -0.54
PACS1-211ENST00000531298 KIF21AQ7Z4S6 1674 aa11.68□□□□□ -0.54
PACS1-211ENST00000531298 MRC2Q9UBG0 1479 aa11.66□□□□□ -0.54
PACS1-211ENST00000531298 TARBP1Q13395 1621 aaKnown RBP11.65□□□□□ -0.54
PACS1-211ENST00000531298 EFCAB5A4FU69 1503 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 218.7 ms