RNA–Protein interactions for RNA: ENST00000531201.5

IFT46-208, Transcript of intraflagellar transport 46, humanhuman

TSL 2

Gene IFT46, Length 1,496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-208ENST00000531201 AEBP2Q6ZN18 517 aaPredicted RBP23.09■■□□□ 1.29
IFT46-208ENST00000531201 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
IFT46-208ENST00000531201 NISCHQ9Y2I1 1504 aa20.29■□□□□ 0.84
IFT46-208ENST00000531201 SENP3Q9H4L4 574 aaPredicted RBP19.86■□□□□ 0.77
IFT46-208ENST00000531201 PHF23Q9BUL5 403 aaPredicted RBP19.48■□□□□ 0.71
IFT46-208ENST00000531201 FOXD1Q16676 465 aa18.52■□□□□ 0.56
IFT46-208ENST00000531201 POTEDQ86YR6 584 aa18.14■□□□□ 0.49
IFT46-208ENST00000531201 MSH5O43196 834 aa17.62■□□□□ 0.41
IFT46-208ENST00000531201 CCDC180Q9P1Z9 1646 aa17.56■□□□□ 0.4
IFT46-208ENST00000531201 PIAS4Q8N2W9 510 aaPredicted RBP17.18■□□□□ 0.34
IFT46-208ENST00000531201 ZCCHC6Q5VYS8 1495 aaKnown RBP17.18■□□□□ 0.34
IFT46-208ENST00000531201 PLPPR3Q6T4P5 718 aa16.86■□□□□ 0.29
IFT46-208ENST00000531201 DCAF1Q9Y4B6 1507 aa16.85■□□□□ 0.29
IFT46-208ENST00000531201 PPP6R1Q9UPN7 881 aa16.85■□□□□ 0.29
IFT46-208ENST00000531201 ADRA2BP18089 450 aa16.76■□□□□ 0.27
IFT46-208ENST00000531201 SHROOM4Q9ULL8 1493 aa16.75■□□□□ 0.27
IFT46-208ENST00000531201 MYO15BQ96JP2 1530 aa16.47■□□□□ 0.23
IFT46-208ENST00000531201 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
IFT46-208ENST00000531201 SUPT5HO00267 1087 aaKnown RBP16.33■□□□□ 0.2
IFT46-208ENST00000531201 ABCC9O60706 1549 aa16.21■□□□□ 0.19
IFT46-208ENST00000531201 NACADO15069 1562 aa16.19■□□□□ 0.18
IFT46-208ENST00000531201 SCRIBQ14160 1630 aa16.11■□□□□ 0.17
IFT46-208ENST00000531201 RB1CC1Q8TDY2 1594 aa15.91■□□□□ 0.14
IFT46-208ENST00000531201 RSF1Q96T23 1441 aaPredicted RBP15.89■□□□□ 0.13
IFT46-208ENST00000531201 MROH2BQ7Z745 1585 aa15.67■□□□□ 0.1
IFT46-208ENST00000531201 CECR2Q9BXF3 1484 aa15.67■□□□□ 0.1
IFT46-208ENST00000531201 UNC13AQ9UPW8 1703 aa15.65■□□□□ 0.1
IFT46-208ENST00000531201 BAZ1AQ9NRL2 1556 aaPredicted RBP15.65■□□□□ 0.1
IFT46-208ENST00000531201 DMRT2Q9Y5R5 561 aa15.65■□□□□ 0.1
IFT46-208ENST00000531201 WIZO95785 1651 aa15.59■□□□□ 0.09
IFT46-208ENST00000531201 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
IFT46-208ENST00000531201 SMARCA4P51532 1647 aa15.52■□□□□ 0.08
IFT46-208ENST00000531201 EIF4G1Q04637 1599 aaKnown RBP15.49■□□□□ 0.07
IFT46-208ENST00000531201 TOP2AP11388 1531 aaKnown RBP15.48■□□□□ 0.07
IFT46-208ENST00000531201 CACNB1Q02641 598 aaPredicted RBP15.44■□□□□ 0.06
IFT46-208ENST00000531201 BICRAQ9NZM4 1560 aa15.43■□□□□ 0.06
IFT46-208ENST00000531201 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
IFT46-208ENST00000531201 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
IFT46-208ENST00000531201 PEG3Q9GZU2 1588 aa15.35■□□□□ 0.05
IFT46-208ENST00000531201 SMARCA2P51531 1590 aa15.34■□□□□ 0.05
IFT46-208ENST00000531201 LOC105371045A0A1W2PR82 267 aa15.29■□□□□ 0.04
IFT46-208ENST00000531201 CCDC88BA6NC98 1476 aa15.26■□□□□ 0.03
IFT46-208ENST00000531201 HRCP23327 699 aa15.2■□□□□ 0.02
IFT46-208ENST00000531201 PCGF6Q9BYE7 350 aa15.14■□□□□ 0.01
IFT46-208ENST00000531201 ABCC8Q09428 1581 aa15.09■□□□□ 0.01
IFT46-208ENST00000531201 ATAD2BQ9ULI0 1458 aa15.09■□□□□ 0.01
IFT46-208ENST00000531201 PABPN1Q86U42 306 aaKnown RBP eCLIP15.09■□□□□ 0.01
IFT46-208ENST00000531201 TRIM26Q12899 539 aaPredicted RBP15.08■□□□□ 0.01
IFT46-208ENST00000531201 EEA1Q15075 1411 aa15.06■□□□□ 0
IFT46-208ENST00000531201 BAZ1BQ9UIG0 1483 aaKnown RBP15.04■□□□□ -0
IFT46-208ENST00000531201 FAM9AQ8IZU1 332 aaPredicted RBP15.03■□□□□ -0
IFT46-208ENST00000531201 DCAF8L1A6NGE4 600 aa14.99□□□□□ -0.01
IFT46-208ENST00000531201 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
IFT46-208ENST00000531201 WRNQ14191 1432 aaPredicted RBP eCLIP14.95□□□□□ -0.02
IFT46-208ENST00000531201 RNF39Q9H2S5 420 aa14.95□□□□□ -0.02
IFT46-208ENST00000531201 SYNJ1O43426 1573 aa14.9□□□□□ -0.02
IFT46-208ENST00000531201 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
IFT46-208ENST00000531201 SOGA1O94964 1423 aa14.89□□□□□ -0.03
IFT46-208ENST00000531201 TNIKQ9UKE5 1360 aa14.87□□□□□ -0.03
IFT46-208ENST00000531201 KIF21BO75037 1637 aa14.87□□□□□ -0.03
IFT46-208ENST00000531201 HOXD11P31277 338 aaPredicted RBP14.85□□□□□ -0.03
IFT46-208ENST00000531201 GOLGA3Q08378 1498 aa14.85□□□□□ -0.03
IFT46-208ENST00000531201 BIVM-ERCC5R4GMW8 1640 aa14.85□□□□□ -0.03
IFT46-208ENST00000531201 TOP2BQ02880 1626 aa14.83□□□□□ -0.03
IFT46-208ENST00000531201 CEP162Q5TB80 1403 aa14.82□□□□□ -0.04
IFT46-208ENST00000531201 RUSC2Q8N2Y8 1516 aa14.8□□□□□ -0.04
IFT46-208ENST00000531201 CSRNP3Q8WYN3 585 aa14.8□□□□□ -0.04
IFT46-208ENST00000531201 CEP164Q9UPV0 1460 aa14.79□□□□□ -0.04
IFT46-208ENST00000531201 ZEB1P37275 1124 aaPredicted RBP14.78□□□□□ -0.04
IFT46-208ENST00000531201 PRDM2Q13029 1718 aa14.78□□□□□ -0.04
IFT46-208ENST00000531201 EHMT2Q96KQ7 1210 aa14.74□□□□□ -0.05
IFT46-208ENST00000531201 C1QBPQ07021 282 aaKnown RBP14.73□□□□□ -0.05
IFT46-208ENST00000531201 CFTRP13569 1480 aa14.7□□□□□ -0.06
IFT46-208ENST00000531201 PPP4R3CPQ6ZMV5 832 aa14.69□□□□□ -0.06
IFT46-208ENST00000531201 ERICH3Q5RHP9 1530 aa14.66□□□□□ -0.06
IFT46-208ENST00000531201 PPARGC1BQ86YN6 1023 aaKnown RBP14.66□□□□□ -0.06
IFT46-208ENST00000531201 CUX1P39880 1505 aa14.64□□□□□ -0.07
IFT46-208ENST00000531201 UBTFP17480 764 aaKnown RBP14.61□□□□□ -0.07
IFT46-208ENST00000531201 PRXQ9BXM0 1461 aa14.59□□□□□ -0.07
IFT46-208ENST00000531201 RAPGEF2Q9Y4G8 1499 aa14.59□□□□□ -0.07
IFT46-208ENST00000531201 RNF216Q9NWF9 866 aaPredicted RBP14.58□□□□□ -0.08
IFT46-208ENST00000531201 CLIP1P30622 1438 aa14.58□□□□□ -0.08
IFT46-208ENST00000531201 CNKSR2Q8WXI2 1034 aa14.57□□□□□ -0.08
IFT46-208ENST00000531201 VPS8Q8N3P4 1428 aa14.56□□□□□ -0.08
IFT46-208ENST00000531201 CC2D2AQ9P2K1 1620 aa14.54□□□□□ -0.08
IFT46-208ENST00000531201 KIF27Q86VH2 1401 aa14.53□□□□□ -0.08
IFT46-208ENST00000531201 CADPSQ9ULU8 1353 aa14.51□□□□□ -0.09
IFT46-208ENST00000531201 DNAJC5BQ9UF47 199 aa14.5□□□□□ -0.09
IFT46-208ENST00000531201 ARAP1Q96P48 1450 aa14.41□□□□□ -0.1
IFT46-208ENST00000531201 FGD5Q6ZNL6 1462 aa14.39□□□□□ -0.11
IFT46-208ENST00000531201 DNMBPQ6XZF7 1577 aa14.39□□□□□ -0.11
IFT46-208ENST00000531201 CUX2O14529 1486 aa14.37□□□□□ -0.11
IFT46-208ENST00000531201 FANCD2Q9BXW9 1451 aa14.37□□□□□ -0.11
IFT46-208ENST00000531201 CCER1Q8TC90 406 aaPredicted RBP14.37□□□□□ -0.11
IFT46-208ENST00000531201 LAMC3Q9Y6N6 1575 aa14.35□□□□□ -0.11
IFT46-208ENST00000531201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.12
IFT46-208ENST00000531201 APLP2Q06481 763 aa14.31□□□□□ -0.12
IFT46-208ENST00000531201 ARHGAP35Q9NRY4 1499 aa14.31□□□□□ -0.12
IFT46-208ENST00000531201 IGF1RP08069 1367 aa14.31□□□□□ -0.12
IFT46-208ENST00000531201 ABCA10Q8WWZ4 1543 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms