RNA–Protein interactions for RNA: ENST00000531195.1

APOL3-219, Transcript of apolipoprotein L3, humanhuman

TSL 4

Gene APOL3, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL3-219ENST00000531195 AEBP2Q6ZN18 517 aaPredicted RBP19.14■□□□□ 0.65
APOL3-219ENST00000531195 CHIC1Q5VXU3 224 aa19.13■□□□□ 0.65
APOL3-219ENST00000531195 NISCHQ9Y2I1 1504 aa17.29■□□□□ 0.36
APOL3-219ENST00000531195 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
APOL3-219ENST00000531195 SENP3Q9H4L4 574 aaPredicted RBP16.15■□□□□ 0.18
APOL3-219ENST00000531195 PLPPR3Q6T4P5 718 aa15.77■□□□□ 0.12
APOL3-219ENST00000531195 CCDC180Q9P1Z9 1646 aa15.21■□□□□ 0.03
APOL3-219ENST00000531195 FOXD1Q16676 465 aa14.95□□□□□ -0.02
APOL3-219ENST00000531195 ABCC9O60706 1549 aa14.89□□□□□ -0.03
APOL3-219ENST00000531195 ADRA2BP18089 450 aa14.82□□□□□ -0.04
APOL3-219ENST00000531195 PPP6R1Q9UPN7 881 aa14.78□□□□□ -0.04
APOL3-219ENST00000531195 DCAF8L2P0C7V8 631 aa14.46□□□□□ -0.09
APOL3-219ENST00000531195 ZCCHC6Q5VYS8 1495 aaKnown RBP14.43□□□□□ -0.1
APOL3-219ENST00000531195 NACADO15069 1562 aa14.3□□□□□ -0.12
APOL3-219ENST00000531195 RB1CC1Q8TDY2 1594 aa14.28□□□□□ -0.12
APOL3-219ENST00000531195 DCAF1Q9Y4B6 1507 aa14.25□□□□□ -0.13
APOL3-219ENST00000531195 PIAS4Q8N2W9 510 aaPredicted RBP14.25□□□□□ -0.13
APOL3-219ENST00000531195 MYO15BQ96JP2 1530 aa14.25□□□□□ -0.13
APOL3-219ENST00000531195 KCNA4P22459 653 aa14.2□□□□□ -0.14
APOL3-219ENST00000531195 SCRIBQ14160 1630 aa14.01□□□□□ -0.17
APOL3-219ENST00000531195 PABPN1Q86U42 306 aaKnown RBP eCLIP14□□□□□ -0.17
APOL3-219ENST00000531195 UNC13AQ9UPW8 1703 aa13.98□□□□□ -0.17
APOL3-219ENST00000531195 PPP4R3CPQ6ZMV5 832 aa13.97□□□□□ -0.17
APOL3-219ENST00000531195 BICRAQ9NZM4 1560 aa13.92□□□□□ -0.18
APOL3-219ENST00000531195 EHMT2Q96KQ7 1210 aa13.85□□□□□ -0.19
APOL3-219ENST00000531195 SHROOM4Q9ULL8 1493 aa13.85□□□□□ -0.19
APOL3-219ENST00000531195 NCBP3Q53F19 620 aaKnown RBP13.74□□□□□ -0.21
APOL3-219ENST00000531195 DNAJC5BQ9UF47 199 aa13.64□□□□□ -0.23
APOL3-219ENST00000531195 SLC4A1APQ9BWU0 796 aaKnown RBP13.62□□□□□ -0.23
APOL3-219ENST00000531195 MSH5O43196 834 aa13.58□□□□□ -0.24
APOL3-219ENST00000531195 NPM3O75607 178 aaKnown RBP13.54□□□□□ -0.24
APOL3-219ENST00000531195 SCAF1Q9H7N4 1312 aaKnown RBP13.52□□□□□ -0.25
APOL3-219ENST00000531195 CECR2Q9BXF3 1484 aa13.52□□□□□ -0.25
APOL3-219ENST00000531195 EIF4G1Q04637 1599 aaKnown RBP13.52□□□□□ -0.25
APOL3-219ENST00000531195 CNKSR2Q8WXI2 1034 aa13.45□□□□□ -0.26
APOL3-219ENST00000531195 CC2D2AQ9P2K1 1620 aa13.43□□□□□ -0.26
APOL3-219ENST00000531195 CSRNP3Q8WYN3 585 aa13.38□□□□□ -0.27
APOL3-219ENST00000531195 SMARCA4P51532 1647 aa13.37□□□□□ -0.27
APOL3-219ENST00000531195 MROH2BQ7Z745 1585 aa13.37□□□□□ -0.27
APOL3-219ENST00000531195 BAZ1AQ9NRL2 1556 aaPredicted RBP13.35□□□□□ -0.27
APOL3-219ENST00000531195 MAPK8IP2Q13387 824 aaPredicted RBP13.32□□□□□ -0.28
APOL3-219ENST00000531195 ATAD2BQ9ULI0 1458 aa13.29□□□□□ -0.28
APOL3-219ENST00000531195 RSF1Q96T23 1441 aaPredicted RBP13.27□□□□□ -0.29
APOL3-219ENST00000531195 NCAPD3P42695 1498 aa13.24□□□□□ -0.29
APOL3-219ENST00000531195 SMARCA2P51531 1590 aa13.22□□□□□ -0.29
APOL3-219ENST00000531195 PEG3Q9GZU2 1588 aa13.21□□□□□ -0.29
APOL3-219ENST00000531195 WIZO95785 1651 aa13.21□□□□□ -0.3
APOL3-219ENST00000531195 BAZ1BQ9UIG0 1483 aaKnown RBP13.16□□□□□ -0.3
APOL3-219ENST00000531195 HMGXB3Q12766 1538 aa13.15□□□□□ -0.3
APOL3-219ENST00000531195 SUPT5HO00267 1087 aaKnown RBP13.07□□□□□ -0.32
APOL3-219ENST00000531195 ZBTB22O15209 634 aa13.06□□□□□ -0.32
APOL3-219ENST00000531195 RNF216Q9NWF9 866 aaPredicted RBP13.06□□□□□ -0.32
APOL3-219ENST00000531195 TOP2AP11388 1531 aaKnown RBP13.04□□□□□ -0.32
APOL3-219ENST00000531195 DMRT2Q9Y5R5 561 aa12.96□□□□□ -0.33
APOL3-219ENST00000531195 NESP48681 1621 aa12.95□□□□□ -0.34
APOL3-219ENST00000531195 CCDC88BA6NC98 1476 aa12.94□□□□□ -0.34
APOL3-219ENST00000531195 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
APOL3-219ENST00000531195 CADPSQ9ULU8 1353 aa12.88□□□□□ -0.35
APOL3-219ENST00000531195 HOXD11P31277 338 aaPredicted RBP12.86□□□□□ -0.35
APOL3-219ENST00000531195 CFTRP13569 1480 aa12.82□□□□□ -0.36
APOL3-219ENST00000531195 LAMC3Q9Y6N6 1575 aa12.81□□□□□ -0.36
APOL3-219ENST00000531195 ERCC6Q03468 1493 aa12.78□□□□□ -0.36
APOL3-219ENST00000531195 PDS5BQ9NTI5 1447 aa12.76□□□□□ -0.37
APOL3-219ENST00000531195 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
APOL3-219ENST00000531195 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
APOL3-219ENST00000531195 CEP164Q9UPV0 1460 aa12.67□□□□□ -0.38
APOL3-219ENST00000531195 THOC2Q8NI27 1593 aaKnown RBP12.65□□□□□ -0.38
APOL3-219ENST00000531195 SLC4A2P04920 1241 aa12.65□□□□□ -0.38
APOL3-219ENST00000531195 MRC2Q9UBG0 1479 aa12.64□□□□□ -0.39
APOL3-219ENST00000531195 PRDM2Q13029 1718 aa12.63□□□□□ -0.39
APOL3-219ENST00000531195 URB2Q14146 1524 aaKnown RBP12.62□□□□□ -0.39
APOL3-219ENST00000531195 WDR62O43379 1518 aa12.58□□□□□ -0.4
APOL3-219ENST00000531195 CUX2O14529 1486 aa12.55□□□□□ -0.4
APOL3-219ENST00000531195 TOPBP1Q92547 1522 aa12.54□□□□□ -0.4
APOL3-219ENST00000531195 CUX1P39880 1505 aa12.52□□□□□ -0.4
APOL3-219ENST00000531195 ABCC8Q09428 1581 aa12.52□□□□□ -0.4
APOL3-219ENST00000531195 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
APOL3-219ENST00000531195 DNMBPQ6XZF7 1577 aa12.51□□□□□ -0.41
APOL3-219ENST00000531195 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
APOL3-219ENST00000531195 WRNQ14191 1432 aaPredicted RBP eCLIP12.46□□□□□ -0.41
APOL3-219ENST00000531195 SYNJ1O43426 1573 aa12.46□□□□□ -0.42
APOL3-219ENST00000531195 POLA1P09884 1462 aaPredicted RBP12.45□□□□□ -0.42
APOL3-219ENST00000531195 FGD5Q6ZNL6 1462 aa12.44□□□□□ -0.42
APOL3-219ENST00000531195 RAD54L2Q9Y4B4 1467 aa12.44□□□□□ -0.42
APOL3-219ENST00000531195 ZNF608Q9ULD9 1512 aaPredicted RBP12.42□□□□□ -0.42
APOL3-219ENST00000531195 TOP2BQ02880 1626 aa12.4□□□□□ -0.42
APOL3-219ENST00000531195 SOGA1O94964 1423 aa12.4□□□□□ -0.42
APOL3-219ENST00000531195 IFT140Q96RY7 1462 aa12.4□□□□□ -0.43
APOL3-219ENST00000531195 TARBP1Q13395 1621 aaKnown RBP12.39□□□□□ -0.43
APOL3-219ENST00000531195 BIVM-ERCC5R4GMW8 1640 aa12.38□□□□□ -0.43
APOL3-219ENST00000531195 ATXN8OSP0DMR3 200 aa12.37□□□□□ -0.43
APOL3-219ENST00000531195 AQRO60306 1485 aaKnown RBP eCLIP12.36□□□□□ -0.43
APOL3-219ENST00000531195 TDRD9Q8NDG6 1382 aaKnown RBP12.36□□□□□ -0.43
APOL3-219ENST00000531195 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.36□□□□□ -0.43
APOL3-219ENST00000531195 ABCA10Q8WWZ4 1543 aa12.31□□□□□ -0.44
APOL3-219ENST00000531195 EIF4G3O43432 1585 aaKnown RBP12.3□□□□□ -0.44
APOL3-219ENST00000531195 TRIM41Q8WV44 630 aa12.3□□□□□ -0.44
APOL3-219ENST00000531195 WDR97A6NE52 1622 aa12.28□□□□□ -0.44
APOL3-219ENST00000531195 GAPVD1Q14C86 1478 aa12.25□□□□□ -0.45
APOL3-219ENST00000531195 ABCA5Q8WWZ7 1642 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms