RNA–Protein interactions for RNA: ENST00000530551.5

CCDC180-212, Transcript of coiled-coil domain containing 180, humanhuman

TSL 2

Gene CCDC180, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-212ENST00000530551 AEBP2Q6ZN18 517 aaPredicted RBP25.71■■□□□ 1.71
CCDC180-212ENST00000530551 CHIC1Q5VXU3 224 aa25.45■■□□□ 1.66
CCDC180-212ENST00000530551 PHF23Q9BUL5 403 aaPredicted RBP22.41■■□□□ 1.18
CCDC180-212ENST00000530551 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
CCDC180-212ENST00000530551 SENP3Q9H4L4 574 aaPredicted RBP21.77■■□□□ 1.08
CCDC180-212ENST00000530551 PLPPR3Q6T4P5 718 aa20.82■□□□□ 0.92
CCDC180-212ENST00000530551 ABCC9O60706 1549 aa20.59■□□□□ 0.89
CCDC180-212ENST00000530551 CCDC180Q9P1Z9 1646 aa20.25■□□□□ 0.83
CCDC180-212ENST00000530551 FOXD1Q16676 465 aa20.15■□□□□ 0.82
CCDC180-212ENST00000530551 DNAJC5BQ9UF47 199 aa19.71■□□□□ 0.75
CCDC180-212ENST00000530551 ADRA2BP18089 450 aa19.66■□□□□ 0.74
CCDC180-212ENST00000530551 PPP6R1Q9UPN7 881 aa19.65■□□□□ 0.74
CCDC180-212ENST00000530551 RB1CC1Q8TDY2 1594 aa19.47■□□□□ 0.71
CCDC180-212ENST00000530551 NACADO15069 1562 aa19.25■□□□□ 0.67
CCDC180-212ENST00000530551 PIAS4Q8N2W9 510 aaPredicted RBP19.1■□□□□ 0.65
CCDC180-212ENST00000530551 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
CCDC180-212ENST00000530551 UNC13AQ9UPW8 1703 aa19■□□□□ 0.63
CCDC180-212ENST00000530551 BICRAQ9NZM4 1560 aa18.91■□□□□ 0.62
CCDC180-212ENST00000530551 DCAF8L2P0C7V8 631 aa18.91■□□□□ 0.62
CCDC180-212ENST00000530551 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
CCDC180-212ENST00000530551 SHROOM4Q9ULL8 1493 aa18.7■□□□□ 0.58
CCDC180-212ENST00000530551 CECR2Q9BXF3 1484 aa18.64■□□□□ 0.57
CCDC180-212ENST00000530551 CC2D2AQ9P2K1 1620 aa18.61■□□□□ 0.57
CCDC180-212ENST00000530551 EIF4G1Q04637 1599 aaKnown RBP18.48■□□□□ 0.55
CCDC180-212ENST00000530551 DNAJC5Q9H3Z4 198 aa18.48■□□□□ 0.55
CCDC180-212ENST00000530551 MSH5O43196 834 aa18.47■□□□□ 0.55
CCDC180-212ENST00000530551 DCAF1Q9Y4B6 1507 aa18.47■□□□□ 0.55
CCDC180-212ENST00000530551 ZCCHC6Q5VYS8 1495 aaKnown RBP18.4■□□□□ 0.54
CCDC180-212ENST00000530551 PPP4R3CPQ6ZMV5 832 aa18.38■□□□□ 0.53
CCDC180-212ENST00000530551 KCNA4P22459 653 aa18.35■□□□□ 0.53
CCDC180-212ENST00000530551 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
CCDC180-212ENST00000530551 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
CCDC180-212ENST00000530551 CUX2O14529 1486 aa18.01■□□□□ 0.47
CCDC180-212ENST00000530551 SCAF1Q9H7N4 1312 aaKnown RBP17.99■□□□□ 0.47
CCDC180-212ENST00000530551 ERCC6Q03468 1493 aa17.83■□□□□ 0.45
CCDC180-212ENST00000530551 CNKSR2Q8WXI2 1034 aa17.8■□□□□ 0.44
CCDC180-212ENST00000530551 NCAPD3P42695 1498 aa17.77■□□□□ 0.44
CCDC180-212ENST00000530551 NPM3O75607 178 aaKnown RBP17.74■□□□□ 0.43
CCDC180-212ENST00000530551 MAPK8IP2Q13387 824 aaPredicted RBP17.72■□□□□ 0.43
CCDC180-212ENST00000530551 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
CCDC180-212ENST00000530551 HMGXB3Q12766 1538 aa17.61■□□□□ 0.41
CCDC180-212ENST00000530551 SMARCA2P51531 1590 aa17.57■□□□□ 0.4
CCDC180-212ENST00000530551 NESP48681 1621 aa17.57■□□□□ 0.4
CCDC180-212ENST00000530551 SLC4A1APQ9BWU0 796 aaKnown RBP17.54■□□□□ 0.4
CCDC180-212ENST00000530551 THOC2Q8NI27 1593 aaKnown RBP17.53■□□□□ 0.4
CCDC180-212ENST00000530551 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
CCDC180-212ENST00000530551 LAMC3Q9Y6N6 1575 aa17.45■□□□□ 0.38
CCDC180-212ENST00000530551 EHMT2Q96KQ7 1210 aa17.43■□□□□ 0.38
CCDC180-212ENST00000530551 DMRT2Q9Y5R5 561 aa17.43■□□□□ 0.38
CCDC180-212ENST00000530551 BAZ1BQ9UIG0 1483 aaKnown RBP17.42■□□□□ 0.38
CCDC180-212ENST00000530551 TRIM41Q8WV44 630 aa17.39■□□□□ 0.37
CCDC180-212ENST00000530551 PEG3Q9GZU2 1588 aa17.38■□□□□ 0.37
CCDC180-212ENST00000530551 RNF216Q9NWF9 866 aaPredicted RBP17.37■□□□□ 0.37
CCDC180-212ENST00000530551 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
CCDC180-212ENST00000530551 PDS5BQ9NTI5 1447 aa17.35■□□□□ 0.37
CCDC180-212ENST00000530551 KIF21AQ7Z4S6 1674 aa17.34■□□□□ 0.37
CCDC180-212ENST00000530551 MRC2Q9UBG0 1479 aa17.21■□□□□ 0.35
CCDC180-212ENST00000530551 HOXD11P31277 338 aaPredicted RBP17.21■□□□□ 0.35
CCDC180-212ENST00000530551 WDR62O43379 1518 aa17.2■□□□□ 0.34
CCDC180-212ENST00000530551 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
CCDC180-212ENST00000530551 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
CCDC180-212ENST00000530551 OSCARQ8IYS5 282 aa17.08■□□□□ 0.32
CCDC180-212ENST00000530551 CSRNP3Q8WYN3 585 aa17.06■□□□□ 0.32
CCDC180-212ENST00000530551 CEP164Q9UPV0 1460 aa17.05■□□□□ 0.32
CCDC180-212ENST00000530551 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
CCDC180-212ENST00000530551 WIZO95785 1651 aa16.92■□□□□ 0.3
CCDC180-212ENST00000530551 CFTRP13569 1480 aa16.92■□□□□ 0.3
CCDC180-212ENST00000530551 ZBTB22O15209 634 aa16.9■□□□□ 0.3
CCDC180-212ENST00000530551 RIMBP3CA6NJZ7 1639 aa16.89■□□□□ 0.29
CCDC180-212ENST00000530551 RIMBP3BA6NNM3 1639 aa16.89■□□□□ 0.29
CCDC180-212ENST00000530551 RIMBP3Q9UFD9 1639 aa16.89■□□□□ 0.29
CCDC180-212ENST00000530551 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
CCDC180-212ENST00000530551 ARHGEF11O15085 1522 aa16.8■□□□□ 0.28
CCDC180-212ENST00000530551 FOXD4L1Q9NU39 408 aa16.8■□□□□ 0.28
CCDC180-212ENST00000530551 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
CCDC180-212ENST00000530551 TOP2AP11388 1531 aaKnown RBP16.71■□□□□ 0.27
CCDC180-212ENST00000530551 ZNF608Q9ULD9 1512 aaPredicted RBP16.71■□□□□ 0.27
CCDC180-212ENST00000530551 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
CCDC180-212ENST00000530551 SLC4A2P04920 1241 aa16.67■□□□□ 0.26
CCDC180-212ENST00000530551 CYB5RLQ6IPT4 315 aa16.66■□□□□ 0.26
CCDC180-212ENST00000530551 RSF1Q96T23 1441 aaPredicted RBP16.65■□□□□ 0.26
CCDC180-212ENST00000530551 DCAF8L1A6NGE4 600 aa16.65■□□□□ 0.26
CCDC180-212ENST00000530551 EIF4G3O43432 1585 aaKnown RBP16.62■□□□□ 0.25
CCDC180-212ENST00000530551 TOPBP1Q92547 1522 aa16.61■□□□□ 0.25
CCDC180-212ENST00000530551 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
CCDC180-212ENST00000530551 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
CCDC180-212ENST00000530551 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
CCDC180-212ENST00000530551 CHD1O14646 1710 aa16.56■□□□□ 0.24
CCDC180-212ENST00000530551 DNMBPQ6XZF7 1577 aa16.52■□□□□ 0.24
CCDC180-212ENST00000530551 CCDC88BA6NC98 1476 aa16.51■□□□□ 0.23
CCDC180-212ENST00000530551 TARBP1Q13395 1621 aaKnown RBP16.51■□□□□ 0.23
CCDC180-212ENST00000530551 AQRO60306 1485 aaKnown RBP eCLIP16.5■□□□□ 0.23
CCDC180-212ENST00000530551 FBLN2P98095 1184 aa16.44■□□□□ 0.22
CCDC180-212ENST00000530551 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
CCDC180-212ENST00000530551 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
CCDC180-212ENST00000530551 MYCNP04198 464 aaPredicted RBP16.4■□□□□ 0.22
CCDC180-212ENST00000530551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.39■□□□□ 0.21
CCDC180-212ENST00000530551 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
CCDC180-212ENST00000530551 SYNJ1O43426 1573 aa16.34■□□□□ 0.21
CCDC180-212ENST00000530551 SNAPC4Q5SXM2 1469 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms