RNA–Protein interactions for RNA: ENST00000529413.5

VAV3-212, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene VAV3, Length 1,374 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-212ENST00000529413 AEBP2Q6ZN18 517 aaPredicted RBP27.12■■□□□ 1.93
VAV3-212ENST00000529413 CHIC1Q5VXU3 224 aa25.91■■□□□ 1.74
VAV3-212ENST00000529413 SENP3Q9H4L4 574 aaPredicted RBP23.23■■□□□ 1.31
VAV3-212ENST00000529413 PHF23Q9BUL5 403 aaPredicted RBP22.9■■□□□ 1.26
VAV3-212ENST00000529413 NISCHQ9Y2I1 1504 aa22.41■■□□□ 1.18
VAV3-212ENST00000529413 FOXD1Q16676 465 aa21.58■■□□□ 1.04
VAV3-212ENST00000529413 PLPPR3Q6T4P5 718 aa20.81■□□□□ 0.92
VAV3-212ENST00000529413 PIAS4Q8N2W9 510 aaPredicted RBP20.26■□□□□ 0.83
VAV3-212ENST00000529413 MSH5O43196 834 aa20.22■□□□□ 0.83
VAV3-212ENST00000529413 PPP6R1Q9UPN7 881 aa20.22■□□□□ 0.83
VAV3-212ENST00000529413 ADRA2BP18089 450 aa20.21■□□□□ 0.83
VAV3-212ENST00000529413 CCDC180Q9P1Z9 1646 aa19.74■□□□□ 0.75
VAV3-212ENST00000529413 POTEDQ86YR6 584 aa19.51■□□□□ 0.71
VAV3-212ENST00000529413 ABCC9O60706 1549 aa19.34■□□□□ 0.69
VAV3-212ENST00000529413 DCAF8L2P0C7V8 631 aa18.9■□□□□ 0.62
VAV3-212ENST00000529413 ZCCHC6Q5VYS8 1495 aaKnown RBP18.68■□□□□ 0.58
VAV3-212ENST00000529413 SCAF1Q9H7N4 1312 aaKnown RBP18.58■□□□□ 0.56
VAV3-212ENST00000529413 NACADO15069 1562 aa18.57■□□□□ 0.56
VAV3-212ENST00000529413 RB1CC1Q8TDY2 1594 aa18.57■□□□□ 0.56
VAV3-212ENST00000529413 MAPK8IP2Q13387 824 aaPredicted RBP18.51■□□□□ 0.55
VAV3-212ENST00000529413 DCAF1Q9Y4B6 1507 aa18.47■□□□□ 0.55
VAV3-212ENST00000529413 MYO15BQ96JP2 1530 aa18.46■□□□□ 0.55
VAV3-212ENST00000529413 DMRT2Q9Y5R5 561 aa18.41■□□□□ 0.54
VAV3-212ENST00000529413 PPP4R3CPQ6ZMV5 832 aa18.23■□□□□ 0.51
VAV3-212ENST00000529413 PABPN1Q86U42 306 aaKnown RBP eCLIP18.18■□□□□ 0.5
VAV3-212ENST00000529413 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
VAV3-212ENST00000529413 UNC13AQ9UPW8 1703 aa18.12■□□□□ 0.49
VAV3-212ENST00000529413 BICRAQ9NZM4 1560 aa18.01■□□□□ 0.47
VAV3-212ENST00000529413 SHROOM4Q9ULL8 1493 aa18■□□□□ 0.47
VAV3-212ENST00000529413 CNKSR2Q8WXI2 1034 aa17.88■□□□□ 0.45
VAV3-212ENST00000529413 DCAF8L1A6NGE4 600 aa17.77■□□□□ 0.43
VAV3-212ENST00000529413 HOXD11P31277 338 aaPredicted RBP17.74■□□□□ 0.43
VAV3-212ENST00000529413 RNF216Q9NWF9 866 aaPredicted RBP17.67■□□□□ 0.42
VAV3-212ENST00000529413 DNAJC5BQ9UF47 199 aa17.65■□□□□ 0.42
VAV3-212ENST00000529413 NCBP3Q53F19 620 aaKnown RBP17.63■□□□□ 0.41
VAV3-212ENST00000529413 EIF4G1Q04637 1599 aaKnown RBP17.52■□□□□ 0.4
VAV3-212ENST00000529413 CECR2Q9BXF3 1484 aa17.51■□□□□ 0.39
VAV3-212ENST00000529413 CC2D2AQ9P2K1 1620 aa17.42■□□□□ 0.38
VAV3-212ENST00000529413 BAZ1AQ9NRL2 1556 aaPredicted RBP17.33■□□□□ 0.37
VAV3-212ENST00000529413 SMARCA4P51532 1647 aa17.33■□□□□ 0.36
VAV3-212ENST00000529413 MROH2BQ7Z745 1585 aa17.32■□□□□ 0.36
VAV3-212ENST00000529413 CACNB1Q02641 598 aaPredicted RBP17.31■□□□□ 0.36
VAV3-212ENST00000529413 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
VAV3-212ENST00000529413 ATAD2BQ9ULI0 1458 aa17.23■□□□□ 0.35
VAV3-212ENST00000529413 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
VAV3-212ENST00000529413 RSF1Q96T23 1441 aaPredicted RBP17.18■□□□□ 0.34
VAV3-212ENST00000529413 NCAPD3P42695 1498 aa17.17■□□□□ 0.34
VAV3-212ENST00000529413 SMARCA2P51531 1590 aa17.17■□□□□ 0.34
VAV3-212ENST00000529413 WIZO95785 1651 aa17.14■□□□□ 0.33
VAV3-212ENST00000529413 BAZ1BQ9UIG0 1483 aaKnown RBP17.1■□□□□ 0.33
VAV3-212ENST00000529413 PEG3Q9GZU2 1588 aa17.09■□□□□ 0.33
VAV3-212ENST00000529413 SUPT5HO00267 1087 aaKnown RBP17.05■□□□□ 0.32
VAV3-212ENST00000529413 HMGXB3Q12766 1538 aa17.05■□□□□ 0.32
VAV3-212ENST00000529413 KCNA4P22459 653 aa17.04■□□□□ 0.32
VAV3-212ENST00000529413 C1QBPQ07021 282 aaKnown RBP17.01■□□□□ 0.31
VAV3-212ENST00000529413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.31
VAV3-212ENST00000529413 TOP2AP11388 1531 aaKnown RBP16.92■□□□□ 0.3
VAV3-212ENST00000529413 CCDC88BA6NC98 1476 aa16.78■□□□□ 0.28
VAV3-212ENST00000529413 NESP48681 1621 aa16.78■□□□□ 0.28
VAV3-212ENST00000529413 CADPSQ9ULU8 1353 aa16.72■□□□□ 0.27
VAV3-212ENST00000529413 LAMC3Q9Y6N6 1575 aa16.65■□□□□ 0.26
VAV3-212ENST00000529413 ERCC6Q03468 1493 aa16.63■□□□□ 0.25
VAV3-212ENST00000529413 CFTRP13569 1480 aa16.62■□□□□ 0.25
VAV3-212ENST00000529413 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
VAV3-212ENST00000529413 U3KPZ7 1027 aaPredicted RBP16.57■□□□□ 0.24
VAV3-212ENST00000529413 FANCD2Q9BXW9 1451 aa16.53■□□□□ 0.24
VAV3-212ENST00000529413 KIF21AQ7Z4S6 1674 aa16.5■□□□□ 0.23
VAV3-212ENST00000529413 CEP164Q9UPV0 1460 aa16.47■□□□□ 0.23
VAV3-212ENST00000529413 SLC4A2P04920 1241 aa16.44■□□□□ 0.22
VAV3-212ENST00000529413 PRDM2Q13029 1718 aa16.41■□□□□ 0.22
VAV3-212ENST00000529413 MRC2Q9UBG0 1479 aa16.4■□□□□ 0.22
VAV3-212ENST00000529413 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
VAV3-212ENST00000529413 CAPN15O75808 1086 aa16.37■□□□□ 0.21
VAV3-212ENST00000529413 URB2Q14146 1524 aaKnown RBP16.34■□□□□ 0.21
VAV3-212ENST00000529413 SPINK5Q9NQ38 1064 aaPredicted RBP16.31■□□□□ 0.2
VAV3-212ENST00000529413 CUX2O14529 1486 aa16.3■□□□□ 0.2
VAV3-212ENST00000529413 WDR62O43379 1518 aa16.3■□□□□ 0.2
VAV3-212ENST00000529413 TOPBP1Q92547 1522 aa16.27■□□□□ 0.2
VAV3-212ENST00000529413 APLP2Q06481 763 aa16.26■□□□□ 0.19
VAV3-212ENST00000529413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.24■□□□□ 0.19
VAV3-212ENST00000529413 ABCC8Q09428 1581 aa16.24■□□□□ 0.19
VAV3-212ENST00000529413 HNRNPUL2Q1KMD3 747 aaKnown RBP16.24■□□□□ 0.19
VAV3-212ENST00000529413 DNMBPQ6XZF7 1577 aa16.23■□□□□ 0.19
VAV3-212ENST00000529413 CUX1P39880 1505 aa16.22■□□□□ 0.19
VAV3-212ENST00000529413 WRNQ14191 1432 aaPredicted RBP eCLIP16.2■□□□□ 0.18
VAV3-212ENST00000529413 SLC4A1APQ9BWU0 796 aaKnown RBP16.17■□□□□ 0.18
VAV3-212ENST00000529413 DSG3P32926 999 aa16.16■□□□□ 0.18
VAV3-212ENST00000529413 POLA1P09884 1462 aaPredicted RBP16.14■□□□□ 0.17
VAV3-212ENST00000529413 FGD5Q6ZNL6 1462 aa16.14■□□□□ 0.17
VAV3-212ENST00000529413 RAD54L2Q9Y4B4 1467 aa16.14■□□□□ 0.17
VAV3-212ENST00000529413 SAMD1Q6SPF0 538 aaPredicted RBP16.13■□□□□ 0.17
VAV3-212ENST00000529413 SOGA1O94964 1423 aa16.13■□□□□ 0.17
VAV3-212ENST00000529413 SYNJ1O43426 1573 aa16.12■□□□□ 0.17
VAV3-212ENST00000529413 TRHP20396 242 aaPredicted RBP16.12■□□□□ 0.17
VAV3-212ENST00000529413 IFT140Q96RY7 1462 aa16.1■□□□□ 0.17
VAV3-212ENST00000529413 ZNF219Q9P2Y4 722 aaPredicted RBP16.09■□□□□ 0.17
VAV3-212ENST00000529413 TOP2BQ02880 1626 aa16.08■□□□□ 0.16
VAV3-212ENST00000529413 ZNF608Q9ULD9 1512 aaPredicted RBP16.07■□□□□ 0.16
VAV3-212ENST00000529413 BIVM-ERCC5R4GMW8 1640 aa16.06■□□□□ 0.16
VAV3-212ENST00000529413 TDRD9Q8NDG6 1382 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms