RNA–Protein interactions for RNA: ENST00000529398.5

PREX2-205, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2, humanhuman

TSL 1 (best)

Gene PREX2, Length 3,612 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX2-205ENST00000529398 NISCHQ9Y2I1 1504 aa17.55■□□□□ 0.4
PREX2-205ENST00000529398 DCAF8L2P0C7V8 631 aa15.45■□□□□ 0.06
PREX2-205ENST00000529398 SHROOM4Q9ULL8 1493 aa15.41■□□□□ 0.06
PREX2-205ENST00000529398 CCDC180Q9P1Z9 1646 aa15.33■□□□□ 0.05
PREX2-205ENST00000529398 SUPT5HO00267 1087 aaKnown RBP15.21■□□□□ 0.03
PREX2-205ENST00000529398 ZCCHC6Q5VYS8 1495 aaKnown RBP14.91□□□□□ -0.02
PREX2-205ENST00000529398 DCAF1Q9Y4B6 1507 aa14.68□□□□□ -0.06
PREX2-205ENST00000529398 EHMT2Q96KQ7 1210 aa14.61□□□□□ -0.07
PREX2-205ENST00000529398 MYO15BQ96JP2 1530 aa14.38□□□□□ -0.11
PREX2-205ENST00000529398 PCGF6Q9BYE7 350 aa14.38□□□□□ -0.11
PREX2-205ENST00000529398 FAM9AQ8IZU1 332 aaPredicted RBP14.27□□□□□ -0.13
PREX2-205ENST00000529398 LOC105371045A0A1W2PR82 267 aa14.19□□□□□ -0.14
PREX2-205ENST00000529398 CHIC1Q5VXU3 224 aa14.14□□□□□ -0.15
PREX2-205ENST00000529398 ABCC9O60706 1549 aa14.07□□□□□ -0.16
PREX2-205ENST00000529398 PPARGC1BQ86YN6 1023 aaKnown RBP14.06□□□□□ -0.16
PREX2-205ENST00000529398 TTBK1Q5TCY1 1321 aaPredicted RBP14.03□□□□□ -0.16
PREX2-205ENST00000529398 NACADO15069 1562 aa14.01□□□□□ -0.17
PREX2-205ENST00000529398 HRCP23327 699 aa13.92□□□□□ -0.18
PREX2-205ENST00000529398 SCRIBQ14160 1630 aa13.88□□□□□ -0.19
PREX2-205ENST00000529398 UNC13AQ9UPW8 1703 aa13.87□□□□□ -0.19
PREX2-205ENST00000529398 TRIM41Q8WV44 630 aa13.84□□□□□ -0.19
PREX2-205ENST00000529398 RB1CC1Q8TDY2 1594 aa13.73□□□□□ -0.21
PREX2-205ENST00000529398 RANGAP1P46060 587 aaPredicted RBP13.72□□□□□ -0.21
PREX2-205ENST00000529398 RSF1Q96T23 1441 aaPredicted RBP13.69□□□□□ -0.22
PREX2-205ENST00000529398 EIF4G1Q04637 1599 aaKnown RBP13.63□□□□□ -0.23
PREX2-205ENST00000529398 TRIM26Q12899 539 aaPredicted RBP13.61□□□□□ -0.23
PREX2-205ENST00000529398 BICRAQ9NZM4 1560 aa13.58□□□□□ -0.24
PREX2-205ENST00000529398 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
PREX2-205ENST00000529398 MROH2BQ7Z745 1585 aa13.57□□□□□ -0.24
PREX2-205ENST00000529398 BAZ1AQ9NRL2 1556 aaPredicted RBP13.56□□□□□ -0.24
PREX2-205ENST00000529398 CECR2Q9BXF3 1484 aa13.56□□□□□ -0.24
PREX2-205ENST00000529398 CCER1Q8TC90 406 aaPredicted RBP13.53□□□□□ -0.24
PREX2-205ENST00000529398 WIZO95785 1651 aa13.52□□□□□ -0.24
PREX2-205ENST00000529398 SMARCA4P51532 1647 aa13.48□□□□□ -0.25
PREX2-205ENST00000529398 PEG3Q9GZU2 1588 aa13.46□□□□□ -0.25
PREX2-205ENST00000529398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.44□□□□□ -0.26
PREX2-205ENST00000529398 UBTFP17480 764 aaKnown RBP13.4□□□□□ -0.26
PREX2-205ENST00000529398 YTHDC1Q96MU7 727 aaKnown RBP13.39□□□□□ -0.27
PREX2-205ENST00000529398 ZEB1P37275 1124 aaPredicted RBP13.38□□□□□ -0.27
PREX2-205ENST00000529398 TOP2AP11388 1531 aaKnown RBP13.37□□□□□ -0.27
PREX2-205ENST00000529398 SMARCA2P51531 1590 aa13.31□□□□□ -0.28
PREX2-205ENST00000529398 APLP2Q06481 763 aa13.23□□□□□ -0.29
PREX2-205ENST00000529398 HNRNPUL2Q1KMD3 747 aaKnown RBP13.21□□□□□ -0.29
PREX2-205ENST00000529398 CENPBP07199 599 aaPredicted RBP13.16□□□□□ -0.3
PREX2-205ENST00000529398 CCDC88BA6NC98 1476 aa13.15□□□□□ -0.3
PREX2-205ENST00000529398 DIEXFQ68CQ4 756 aaKnown RBP13.11□□□□□ -0.31
PREX2-205ENST00000529398 ITGAEP38570 1179 aa13.1□□□□□ -0.31
PREX2-205ENST00000529398 ATP1B4Q9UN42 357 aaPredicted RBP13.09□□□□□ -0.31
PREX2-205ENST00000529398 ATAD2BQ9ULI0 1458 aa13.05□□□□□ -0.32
PREX2-205ENST00000529398 GTF3C3Q9Y5Q9 886 aa13.04□□□□□ -0.32
PREX2-205ENST00000529398 SCAF1Q9H7N4 1312 aaKnown RBP13.04□□□□□ -0.32
PREX2-205ENST00000529398 HMGXB3Q12766 1538 aa13.02□□□□□ -0.33
PREX2-205ENST00000529398 ABCC8Q09428 1581 aa12.99□□□□□ -0.33
PREX2-205ENST00000529398 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
PREX2-205ENST00000529398 PELP1Q8IZL8 1130 aaKnown RBP12.96□□□□□ -0.33
PREX2-205ENST00000529398 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.34
PREX2-205ENST00000529398 NEUROD1Q13562 356 aa12.95□□□□□ -0.34
PREX2-205ENST00000529398 BIVM-ERCC5R4GMW8 1640 aa12.93□□□□□ -0.34
PREX2-205ENST00000529398 SOGA1O94964 1423 aa12.92□□□□□ -0.34
PREX2-205ENST00000529398 SYNJ1O43426 1573 aa12.92□□□□□ -0.34
PREX2-205ENST00000529398 NCAPD3P42695 1498 aa12.9□□□□□ -0.34
PREX2-205ENST00000529398 ACIN1Q9UKV3 1341 aaKnown RBP12.9□□□□□ -0.34
PREX2-205ENST00000529398 BAZ1BQ9UIG0 1483 aaKnown RBP12.86□□□□□ -0.35
PREX2-205ENST00000529398 P3H3Q8IVL6 736 aa12.86□□□□□ -0.35
PREX2-205ENST00000529398 RUSC2Q8N2Y8 1516 aa12.85□□□□□ -0.35
PREX2-205ENST00000529398 TOP2BQ02880 1626 aa12.85□□□□□ -0.35
PREX2-205ENST00000529398 KIF21BO75037 1637 aa12.8□□□□□ -0.36
PREX2-205ENST00000529398 ZNF316A6NFI3 1004 aaPredicted RBP12.79□□□□□ -0.36
PREX2-205ENST00000529398 CEP162Q5TB80 1403 aa12.77□□□□□ -0.37
PREX2-205ENST00000529398 EEA1Q15075 1411 aa12.75□□□□□ -0.37
PREX2-205ENST00000529398 ARID3CA6NKF2 412 aa12.74□□□□□ -0.37
PREX2-205ENST00000529398 WRNQ14191 1432 aaPredicted RBP eCLIP12.73□□□□□ -0.37
PREX2-205ENST00000529398 CFTRP13569 1480 aa12.72□□□□□ -0.37
PREX2-205ENST00000529398 BCANQ96GW7 911 aa12.72□□□□□ -0.37
PREX2-205ENST00000529398 MIER1Q8N108 512 aa12.71□□□□□ -0.37
PREX2-205ENST00000529398 CNGB1Q14028 1251 aaPredicted RBP12.71□□□□□ -0.38
PREX2-205ENST00000529398 CUX1P39880 1505 aa12.68□□□□□ -0.38
PREX2-205ENST00000529398 FAM50AQ14320 339 aaKnown RBP12.67□□□□□ -0.38
PREX2-205ENST00000529398 CC2D2AQ9P2K1 1620 aa12.66□□□□□ -0.38
PREX2-205ENST00000529398 HIRIP3Q9BW71 556 aaPredicted RBP12.64□□□□□ -0.39
PREX2-205ENST00000529398 TNIKQ9UKE5 1360 aa12.62□□□□□ -0.39
PREX2-205ENST00000529398 ERICH3Q5RHP9 1530 aa12.61□□□□□ -0.39
PREX2-205ENST00000529398 CLIP1P30622 1438 aa12.6□□□□□ -0.39
PREX2-205ENST00000529398 KANK4Q5T7N3 995 aaPredicted RBP12.58□□□□□ -0.39
PREX2-205ENST00000529398 WDR97A6NE52 1622 aa12.58□□□□□ -0.4
PREX2-205ENST00000529398 GOLGA3Q08378 1498 aa12.57□□□□□ -0.4
PREX2-205ENST00000529398 PRXQ9BXM0 1461 aa12.57□□□□□ -0.4
PREX2-205ENST00000529398 CEP164Q9UPV0 1460 aa12.55□□□□□ -0.4
PREX2-205ENST00000529398 NEFLP07196 543 aa12.54□□□□□ -0.4
PREX2-205ENST00000529398 POLR3GLQ9BT43 218 aa12.51□□□□□ -0.41
PREX2-205ENST00000529398 RAPGEF2Q9Y4G8 1499 aa12.5□□□□□ -0.41
PREX2-205ENST00000529398 DDX10Q13206 875 aaKnown RBP12.46□□□□□ -0.41
PREX2-205ENST00000529398 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
PREX2-205ENST00000529398 DNMBPQ6XZF7 1577 aa12.43□□□□□ -0.42
PREX2-205ENST00000529398 LAMC3Q9Y6N6 1575 aa12.43□□□□□ -0.42
PREX2-205ENST00000529398 SIN3AQ96ST3 1273 aa12.43□□□□□ -0.42
PREX2-205ENST00000529398 TRIM52Q96A61 297 aa12.42□□□□□ -0.42
PREX2-205ENST00000529398 ERICH6Q7L0X2 663 aa12.42□□□□□ -0.42
PREX2-205ENST00000529398 CHIC2Q9UKJ5 165 aa12.41□□□□□ -0.42
PREX2-205ENST00000529398 SENP3-EIF4A1A0A087X0R7 540 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms