RNA–Protein interactions for RNA: ENST00000528727.5

CNTN5-210, Transcript of contactin 5, humanhuman

TSL 1 (best)

Gene CNTN5, Length 3,144 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN5-210ENST00000528727 NISCHQ9Y2I1 1504 aa17.62■□□□□ 0.41
CNTN5-210ENST00000528727 CCDC180Q9P1Z9 1646 aa15.45■□□□□ 0.06
CNTN5-210ENST00000528727 ABCC9O60706 1549 aa15.09■□□□□ 0.01
CNTN5-210ENST00000528727 DCAF8L2P0C7V8 631 aa14.97□□□□□ -0.01
CNTN5-210ENST00000528727 ZCCHC6Q5VYS8 1495 aaKnown RBP14.7□□□□□ -0.06
CNTN5-210ENST00000528727 NACADO15069 1562 aa14.52□□□□□ -0.09
CNTN5-210ENST00000528727 RB1CC1Q8TDY2 1594 aa14.51□□□□□ -0.09
CNTN5-210ENST00000528727 DCAF1Q9Y4B6 1507 aa14.48□□□□□ -0.09
CNTN5-210ENST00000528727 MYO15BQ96JP2 1530 aa14.43□□□□□ -0.1
CNTN5-210ENST00000528727 SHROOM4Q9ULL8 1493 aa14.42□□□□□ -0.1
CNTN5-210ENST00000528727 SCRIBQ14160 1630 aa14.28□□□□□ -0.12
CNTN5-210ENST00000528727 SUPT5HO00267 1087 aaKnown RBP14.24□□□□□ -0.13
CNTN5-210ENST00000528727 PABPN1Q86U42 306 aaKnown RBP eCLIP14.21□□□□□ -0.13
CNTN5-210ENST00000528727 UNC13AQ9UPW8 1703 aa14.09□□□□□ -0.15
CNTN5-210ENST00000528727 BICRAQ9NZM4 1560 aa13.99□□□□□ -0.17
CNTN5-210ENST00000528727 HRCP23327 699 aa13.94□□□□□ -0.18
CNTN5-210ENST00000528727 CHIC1Q5VXU3 224 aa13.93□□□□□ -0.18
CNTN5-210ENST00000528727 PCGF6Q9BYE7 350 aa13.81□□□□□ -0.2
CNTN5-210ENST00000528727 CECR2Q9BXF3 1484 aa13.75□□□□□ -0.21
CNTN5-210ENST00000528727 PPARGC1BQ86YN6 1023 aaKnown RBP13.73□□□□□ -0.21
CNTN5-210ENST00000528727 EIF4G1Q04637 1599 aaKnown RBP13.66□□□□□ -0.22
CNTN5-210ENST00000528727 BAZ1AQ9NRL2 1556 aaPredicted RBP13.65□□□□□ -0.22
CNTN5-210ENST00000528727 MROH2BQ7Z745 1585 aa13.61□□□□□ -0.23
CNTN5-210ENST00000528727 LOC105371045A0A1W2PR82 267 aa13.6□□□□□ -0.23
CNTN5-210ENST00000528727 SMARCA4P51532 1647 aa13.6□□□□□ -0.23
CNTN5-210ENST00000528727 PELP1Q8IZL8 1130 aaKnown RBP13.58□□□□□ -0.24
CNTN5-210ENST00000528727 DNAJC5BQ9UF47 199 aa13.57□□□□□ -0.24
CNTN5-210ENST00000528727 RSF1Q96T23 1441 aaPredicted RBP13.56□□□□□ -0.24
CNTN5-210ENST00000528727 CC2D2AQ9P2K1 1620 aa13.55□□□□□ -0.24
CNTN5-210ENST00000528727 ATAD2BQ9ULI0 1458 aa13.49□□□□□ -0.25
CNTN5-210ENST00000528727 SMARCA2P51531 1590 aa13.48□□□□□ -0.25
CNTN5-210ENST00000528727 WIZO95785 1651 aa13.48□□□□□ -0.25
CNTN5-210ENST00000528727 BAZ1BQ9UIG0 1483 aaKnown RBP13.45□□□□□ -0.26
CNTN5-210ENST00000528727 MYT1Q01538 1121 aa13.43□□□□□ -0.26
CNTN5-210ENST00000528727 NCAPD3P42695 1498 aa13.41□□□□□ -0.26
CNTN5-210ENST00000528727 TRIM26Q12899 539 aaPredicted RBP13.4□□□□□ -0.26
CNTN5-210ENST00000528727 PEG3Q9GZU2 1588 aa13.37□□□□□ -0.27
CNTN5-210ENST00000528727 HMGXB3Q12766 1538 aa13.34□□□□□ -0.27
CNTN5-210ENST00000528727 TOP2AP11388 1531 aaKnown RBP13.32□□□□□ -0.28
CNTN5-210ENST00000528727 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
CNTN5-210ENST00000528727 TRIM41Q8WV44 630 aa13.18□□□□□ -0.3
CNTN5-210ENST00000528727 FAM9AQ8IZU1 332 aaPredicted RBP13.17□□□□□ -0.3
CNTN5-210ENST00000528727 ZEB1P37275 1124 aaPredicted RBP13.15□□□□□ -0.3
CNTN5-210ENST00000528727 EHMT2Q96KQ7 1210 aa13.13□□□□□ -0.31
CNTN5-210ENST00000528727 CADPSQ9ULU8 1353 aa13.1□□□□□ -0.31
CNTN5-210ENST00000528727 NESP48681 1621 aa13.09□□□□□ -0.31
CNTN5-210ENST00000528727 SLC24A1O60721 1099 aa13.08□□□□□ -0.31
CNTN5-210ENST00000528727 PRKCSHP14314 528 aaPredicted RBP13.08□□□□□ -0.32
CNTN5-210ENST00000528727 SCAF1Q9H7N4 1312 aaKnown RBP13.08□□□□□ -0.32
CNTN5-210ENST00000528727 CFTRP13569 1480 aa13.02□□□□□ -0.32
CNTN5-210ENST00000528727 ERCC6Q03468 1493 aa13.02□□□□□ -0.33
CNTN5-210ENST00000528727 LAMC3Q9Y6N6 1575 aa13.01□□□□□ -0.33
CNTN5-210ENST00000528727 PDS5BQ9NTI5 1447 aa13□□□□□ -0.33
CNTN5-210ENST00000528727 FANCD2Q9BXW9 1451 aa12.96□□□□□ -0.34
CNTN5-210ENST00000528727 TTBK1Q5TCY1 1321 aaPredicted RBP12.94□□□□□ -0.34
CNTN5-210ENST00000528727 CEP164Q9UPV0 1460 aa12.92□□□□□ -0.34
CNTN5-210ENST00000528727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
CNTN5-210ENST00000528727 KIF21AQ7Z4S6 1674 aa12.87□□□□□ -0.35
CNTN5-210ENST00000528727 PRDM2Q13029 1718 aa12.85□□□□□ -0.35
CNTN5-210ENST00000528727 ABCC8Q09428 1581 aa12.85□□□□□ -0.35
CNTN5-210ENST00000528727 WRNQ14191 1432 aaPredicted RBP eCLIP12.84□□□□□ -0.35
CNTN5-210ENST00000528727 CCER1Q8TC90 406 aaPredicted RBP12.83□□□□□ -0.36
CNTN5-210ENST00000528727 MRC2Q9UBG0 1479 aa12.82□□□□□ -0.36
CNTN5-210ENST00000528727 NEUROD1Q13562 356 aa12.81□□□□□ -0.36
CNTN5-210ENST00000528727 ACIN1Q9UKV3 1341 aaKnown RBP12.8□□□□□ -0.36
CNTN5-210ENST00000528727 URB2Q14146 1524 aaKnown RBP12.77□□□□□ -0.37
CNTN5-210ENST00000528727 TOPBP1Q92547 1522 aa12.75□□□□□ -0.37
CNTN5-210ENST00000528727 CUX1P39880 1505 aa12.74□□□□□ -0.37
CNTN5-210ENST00000528727 DIEXFQ68CQ4 756 aaKnown RBP12.73□□□□□ -0.37
CNTN5-210ENST00000528727 DNMBPQ6XZF7 1577 aa12.73□□□□□ -0.37
CNTN5-210ENST00000528727 SYNJ1O43426 1573 aa12.72□□□□□ -0.37
CNTN5-210ENST00000528727 THOC2Q8NI27 1593 aaKnown RBP12.71□□□□□ -0.37
CNTN5-210ENST00000528727 FGD5Q6ZNL6 1462 aa12.7□□□□□ -0.38
CNTN5-210ENST00000528727 GTF3C3Q9Y5Q9 886 aa12.7□□□□□ -0.38
CNTN5-210ENST00000528727 WDR62O43379 1518 aa12.69□□□□□ -0.38
CNTN5-210ENST00000528727 ERICH6Q7L0X2 663 aa12.69□□□□□ -0.38
CNTN5-210ENST00000528727 SOGA1O94964 1423 aa12.68□□□□□ -0.38
CNTN5-210ENST00000528727 TOP2BQ02880 1626 aa12.68□□□□□ -0.38
CNTN5-210ENST00000528727 POLA1P09884 1462 aaPredicted RBP12.67□□□□□ -0.38
CNTN5-210ENST00000528727 RAD54L2Q9Y4B4 1467 aa12.66□□□□□ -0.38
CNTN5-210ENST00000528727 CEP162Q5TB80 1403 aa12.65□□□□□ -0.38
CNTN5-210ENST00000528727 BIVM-ERCC5R4GMW8 1640 aa12.63□□□□□ -0.39
CNTN5-210ENST00000528727 CUX2O14529 1486 aa12.63□□□□□ -0.39
CNTN5-210ENST00000528727 TDRD9Q8NDG6 1382 aaKnown RBP12.62□□□□□ -0.39
CNTN5-210ENST00000528727 CENPBP07199 599 aaPredicted RBP12.62□□□□□ -0.39
CNTN5-210ENST00000528727 APLP2Q06481 763 aa12.61□□□□□ -0.39
CNTN5-210ENST00000528727 IFT140Q96RY7 1462 aa12.6□□□□□ -0.39
CNTN5-210ENST00000528727 RUSC2Q8N2Y8 1516 aa12.57□□□□□ -0.4
CNTN5-210ENST00000528727 TNIKQ9UKE5 1360 aa12.56□□□□□ -0.4
CNTN5-210ENST00000528727 AQRO60306 1485 aaKnown RBP eCLIP12.56□□□□□ -0.4
CNTN5-210ENST00000528727 KIF27Q86VH2 1401 aa12.55□□□□□ -0.4
CNTN5-210ENST00000528727 ZNF608Q9ULD9 1512 aaPredicted RBP12.55□□□□□ -0.4
CNTN5-210ENST00000528727 ZNF316A6NFI3 1004 aaPredicted RBP12.54□□□□□ -0.4
CNTN5-210ENST00000528727 FBLN2P98095 1184 aa12.53□□□□□ -0.4
CNTN5-210ENST00000528727 ABCA10Q8WWZ4 1543 aa12.53□□□□□ -0.4
CNTN5-210ENST00000528727 UBTFP17480 764 aaKnown RBP12.53□□□□□ -0.4
CNTN5-210ENST00000528727 CSRNP3Q8WYN3 585 aa12.52□□□□□ -0.41
CNTN5-210ENST00000528727 TARBP1Q13395 1621 aaKnown RBP12.52□□□□□ -0.41
CNTN5-210ENST00000528727 YTHDC1Q96MU7 727 aaKnown RBP12.51□□□□□ -0.41
CNTN5-210ENST00000528727 GAPVD1Q14C86 1478 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms