RNA–Protein interactions for RNA: ENST00000527901.1

PDE4DIP-224, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 2

Gene PDE4DIP, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-224ENST00000527901 AEBP2Q6ZN18 517 aaPredicted RBP17.09■□□□□ 0.33
PDE4DIP-224ENST00000527901 CHIC1Q5VXU3 224 aa16.08■□□□□ 0.16
PDE4DIP-224ENST00000527901 SENP3Q9H4L4 574 aaPredicted RBP14.56□□□□□ -0.08
PDE4DIP-224ENST00000527901 PHF23Q9BUL5 403 aaPredicted RBP14.35□□□□□ -0.11
PDE4DIP-224ENST00000527901 DNAJC5BQ9UF47 199 aa13.75□□□□□ -0.21
PDE4DIP-224ENST00000527901 FOXD1Q16676 465 aa13.6□□□□□ -0.23
PDE4DIP-224ENST00000527901 DNAJC5Q9H3Z4 198 aa13.59□□□□□ -0.23
PDE4DIP-224ENST00000527901 ABCC9O60706 1549 aa13.2□□□□□ -0.3
PDE4DIP-224ENST00000527901 MSH5O43196 834 aa12.77□□□□□ -0.37
PDE4DIP-224ENST00000527901 PLPPR3Q6T4P5 718 aa12.77□□□□□ -0.37
PDE4DIP-224ENST00000527901 NISCHQ9Y2I1 1504 aa12.76□□□□□ -0.37
PDE4DIP-224ENST00000527901 POTEDQ86YR6 584 aa12.71□□□□□ -0.37
PDE4DIP-224ENST00000527901 PIAS4Q8N2W9 510 aaPredicted RBP12.66□□□□□ -0.38
PDE4DIP-224ENST00000527901 PPP6R1Q9UPN7 881 aa12.62□□□□□ -0.39
PDE4DIP-224ENST00000527901 ADRA2BP18089 450 aa12.55□□□□□ -0.4
PDE4DIP-224ENST00000527901 TRIM41Q8WV44 630 aa12.22□□□□□ -0.45
PDE4DIP-224ENST00000527901 PABPN1Q86U42 306 aaKnown RBP eCLIP12.12□□□□□ -0.47
PDE4DIP-224ENST00000527901 CECR2Q9BXF3 1484 aa12.08□□□□□ -0.48
PDE4DIP-224ENST00000527901 RB1CC1Q8TDY2 1594 aa12.01□□□□□ -0.49
PDE4DIP-224ENST00000527901 CUX2O14529 1486 aa12□□□□□ -0.49
PDE4DIP-224ENST00000527901 CCDC180Q9P1Z9 1646 aa11.95□□□□□ -0.5
PDE4DIP-224ENST00000527901 CC2D2AQ9P2K1 1620 aa11.89□□□□□ -0.51
PDE4DIP-224ENST00000527901 BICRAQ9NZM4 1560 aa11.8□□□□□ -0.52
PDE4DIP-224ENST00000527901 ILDR1Q86SU0 546 aaPredicted RBP11.78□□□□□ -0.52
PDE4DIP-224ENST00000527901 UNC13AQ9UPW8 1703 aa11.71□□□□□ -0.54
PDE4DIP-224ENST00000527901 NACADO15069 1562 aa11.67□□□□□ -0.54
PDE4DIP-224ENST00000527901 MAPK8IP2Q13387 824 aaPredicted RBP11.57□□□□□ -0.56
PDE4DIP-224ENST00000527901 EIF4G1Q04637 1599 aaKnown RBP11.56□□□□□ -0.56
PDE4DIP-224ENST00000527901 DMRT2Q9Y5R5 561 aa11.54□□□□□ -0.56
PDE4DIP-224ENST00000527901 SHROOM4Q9ULL8 1493 aa11.51□□□□□ -0.57
PDE4DIP-224ENST00000527901 SCAF1Q9H7N4 1312 aaKnown RBP11.46□□□□□ -0.57
PDE4DIP-224ENST00000527901 ERCC6Q03468 1493 aa11.44□□□□□ -0.58
PDE4DIP-224ENST00000527901 OSCARQ8IYS5 282 aa11.26□□□□□ -0.61
PDE4DIP-224ENST00000527901 TRHP20396 242 aaPredicted RBP11.24□□□□□ -0.61
PDE4DIP-224ENST00000527901 DCAF8L2P0C7V8 631 aa11.19□□□□□ -0.62
PDE4DIP-224ENST00000527901 MYO15BQ96JP2 1530 aa11.18□□□□□ -0.62
PDE4DIP-224ENST00000527901 PPP4R3CPQ6ZMV5 832 aa11.17□□□□□ -0.62
PDE4DIP-224ENST00000527901 RIMBP3CA6NJZ7 1639 aa11.17□□□□□ -0.62
PDE4DIP-224ENST00000527901 RIMBP3BA6NNM3 1639 aa11.17□□□□□ -0.62
PDE4DIP-224ENST00000527901 RIMBP3Q9UFD9 1639 aa11.17□□□□□ -0.62
PDE4DIP-224ENST00000527901 THOC2Q8NI27 1593 aaKnown RBP11.15□□□□□ -0.62
PDE4DIP-224ENST00000527901 SOCS7O14512 581 aa11.09□□□□□ -0.63
PDE4DIP-224ENST00000527901 HOXD11P31277 338 aaPredicted RBP11.08□□□□□ -0.64
PDE4DIP-224ENST00000527901 BAZ1AQ9NRL2 1556 aaPredicted RBP11.05□□□□□ -0.64
PDE4DIP-224ENST00000527901 CACNB1Q02641 598 aaPredicted RBP11.02□□□□□ -0.65
PDE4DIP-224ENST00000527901 CYB5RLQ6IPT4 315 aa11.02□□□□□ -0.65
PDE4DIP-224ENST00000527901 ARHGEF11O15085 1522 aa11.02□□□□□ -0.65
PDE4DIP-224ENST00000527901 DCAF8L1A6NGE4 600 aa11.01□□□□□ -0.65
PDE4DIP-224ENST00000527901 NESP48681 1621 aa11.01□□□□□ -0.65
PDE4DIP-224ENST00000527901 CNKSR2Q8WXI2 1034 aa11□□□□□ -0.65
PDE4DIP-224ENST00000527901 LMTK3Q96Q04 1460 aa10.99□□□□□ -0.65
PDE4DIP-224ENST00000527901 FBXO41Q8TF61 875 aa10.95□□□□□ -0.66
PDE4DIP-224ENST00000527901 RNF216Q9NWF9 866 aaPredicted RBP10.94□□□□□ -0.66
PDE4DIP-224ENST00000527901 ILDR2Q71H61 639 aa10.92□□□□□ -0.66
PDE4DIP-224ENST00000527901 RNF39Q9H2S5 420 aa10.9□□□□□ -0.66
PDE4DIP-224ENST00000527901 SCRIBQ14160 1630 aa10.87□□□□□ -0.67
PDE4DIP-224ENST00000527901 NCAPD3P42695 1498 aa10.87□□□□□ -0.67
PDE4DIP-224ENST00000527901 KDM4FA0A1W2PPD8 638 aa10.85□□□□□ -0.67
PDE4DIP-224ENST00000527901 ARAP1Q96P48 1450 aa10.84□□□□□ -0.67
PDE4DIP-224ENST00000527901 SMARCA2P51531 1590 aa10.82□□□□□ -0.68
PDE4DIP-224ENST00000527901 ERCC6L2Q5T890 1561 aa10.75□□□□□ -0.69
PDE4DIP-224ENST00000527901 KIF21AQ7Z4S6 1674 aa10.74□□□□□ -0.69
PDE4DIP-224ENST00000527901 WDR62O43379 1518 aa10.73□□□□□ -0.69
PDE4DIP-224ENST00000527901 LAMC3Q9Y6N6 1575 aa10.73□□□□□ -0.69
PDE4DIP-224ENST00000527901 C1QBPQ07021 282 aaKnown RBP10.72□□□□□ -0.69
PDE4DIP-224ENST00000527901 PDS5BQ9NTI5 1447 aa10.72□□□□□ -0.69
PDE4DIP-224ENST00000527901 NCBP3Q53F19 620 aaKnown RBP10.68□□□□□ -0.7
PDE4DIP-224ENST00000527901 MRC2Q9UBG0 1479 aa10.68□□□□□ -0.7
PDE4DIP-224ENST00000527901 DISP3Q9P2K9 1392 aa10.62□□□□□ -0.71
PDE4DIP-224ENST00000527901 RSF1Q96T23 1441 aaPredicted RBP10.59□□□□□ -0.71
PDE4DIP-224ENST00000527901 ATAD2BQ9ULI0 1458 aa10.59□□□□□ -0.71
PDE4DIP-224ENST00000527901 HECW2Q9P2P5 1572 aa10.59□□□□□ -0.71
PDE4DIP-224ENST00000527901 HMGXB3Q12766 1538 aa10.58□□□□□ -0.72
PDE4DIP-224ENST00000527901 NPM3O75607 178 aaKnown RBP10.56□□□□□ -0.72
PDE4DIP-224ENST00000527901 DCAF1Q9Y4B6 1507 aa10.52□□□□□ -0.73
PDE4DIP-224ENST00000527901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.5□□□□□ -0.73
PDE4DIP-224ENST00000527901 SYNJ2O15056 1496 aa10.49□□□□□ -0.73
PDE4DIP-224ENST00000527901 CADPSQ9ULU8 1353 aa10.43□□□□□ -0.74
PDE4DIP-224ENST00000527901 ZNF608Q9ULD9 1512 aaPredicted RBP10.35□□□□□ -0.75
PDE4DIP-224ENST00000527901 SMARCA4P51532 1647 aa10.33□□□□□ -0.76
PDE4DIP-224ENST00000527901 CEP164Q9UPV0 1460 aa10.33□□□□□ -0.76
PDE4DIP-224ENST00000527901 SPATA31D1Q6ZQQ2 1576 aa10.32□□□□□ -0.76
PDE4DIP-224ENST00000527901 ADGRL1O94910 1474 aa10.32□□□□□ -0.76
PDE4DIP-224ENST00000527901 BAZ1BQ9UIG0 1483 aaKnown RBP10.32□□□□□ -0.76
PDE4DIP-224ENST00000527901 KIF13AQ9H1H9 1805 aa10.31□□□□□ -0.76
PDE4DIP-224ENST00000527901 U3KPZ7 1027 aaPredicted RBP10.31□□□□□ -0.76
PDE4DIP-224ENST00000527901 CHD1O14646 1710 aa10.3□□□□□ -0.76
PDE4DIP-224ENST00000527901 URB2Q14146 1524 aaKnown RBP10.28□□□□□ -0.76
PDE4DIP-224ENST00000527901 ZCCHC6Q5VYS8 1495 aaKnown RBP10.27□□□□□ -0.77
PDE4DIP-224ENST00000527901 CLASP1Q7Z460 1538 aa10.27□□□□□ -0.77
PDE4DIP-224ENST00000527901 IFT140Q96RY7 1462 aa10.24□□□□□ -0.77
PDE4DIP-224ENST00000527901 FANCD2Q9BXW9 1451 aa10.24□□□□□ -0.77
PDE4DIP-224ENST00000527901 KCNA4P22459 653 aa10.24□□□□□ -0.77
PDE4DIP-224ENST00000527901 GAPVD1Q14C86 1478 aa10.23□□□□□ -0.77
PDE4DIP-224ENST00000527901 KDM6BO15054 1643 aa10.2□□□□□ -0.78
PDE4DIP-224ENST00000527901 CERKQ8TCT0 537 aa10.19□□□□□ -0.78
PDE4DIP-224ENST00000527901 SPINK5Q9NQ38 1064 aaPredicted RBP10.19□□□□□ -0.78
PDE4DIP-224ENST00000527901 PEG3Q9GZU2 1588 aa10.18□□□□□ -0.78
PDE4DIP-224ENST00000527901 FBLN2P98095 1184 aa10.18□□□□□ -0.78
PDE4DIP-224ENST00000527901 DSG3P32926 999 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms