RNA–Protein interactions for RNA: ENST00000527528.1

AP003066.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP003066.1, Length 1,647 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003066.1-201ENST00000527528 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
AP003066.1-201ENST00000527528 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
AP003066.1-201ENST00000527528 NISCHQ9Y2I1 1504 aa18.44■□□□□ 0.54
AP003066.1-201ENST00000527528 SENP3Q9H4L4 574 aaPredicted RBP18.41■□□□□ 0.54
AP003066.1-201ENST00000527528 PHF23Q9BUL5 403 aaPredicted RBP18.08■□□□□ 0.48
AP003066.1-201ENST00000527528 FOXD1Q16676 465 aa17.18■□□□□ 0.34
AP003066.1-201ENST00000527528 POTEDQ86YR6 584 aa16.85■□□□□ 0.29
AP003066.1-201ENST00000527528 ABCC9O60706 1549 aa16.68■□□□□ 0.26
AP003066.1-201ENST00000527528 CCDC180Q9P1Z9 1646 aa16.59■□□□□ 0.25
AP003066.1-201ENST00000527528 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
AP003066.1-201ENST00000527528 MSH5O43196 834 aa16.35■□□□□ 0.21
AP003066.1-201ENST00000527528 PIAS4Q8N2W9 510 aaPredicted RBP15.94■□□□□ 0.14
AP003066.1-201ENST00000527528 PPP6R1Q9UPN7 881 aa15.87■□□□□ 0.13
AP003066.1-201ENST00000527528 RB1CC1Q8TDY2 1594 aa15.86■□□□□ 0.13
AP003066.1-201ENST00000527528 ADRA2BP18089 450 aa15.86■□□□□ 0.13
AP003066.1-201ENST00000527528 NACADO15069 1562 aa15.73■□□□□ 0.11
AP003066.1-201ENST00000527528 DNAJC5BQ9UF47 199 aa15.68■□□□□ 0.1
AP003066.1-201ENST00000527528 DCAF8L2P0C7V8 631 aa15.66■□□□□ 0.1
AP003066.1-201ENST00000527528 PABPN1Q86U42 306 aaKnown RBP eCLIP15.53■□□□□ 0.08
AP003066.1-201ENST00000527528 MYO15BQ96JP2 1530 aa15.48■□□□□ 0.07
AP003066.1-201ENST00000527528 UNC13AQ9UPW8 1703 aa15.4■□□□□ 0.06
AP003066.1-201ENST00000527528 BICRAQ9NZM4 1560 aa15.33■□□□□ 0.05
AP003066.1-201ENST00000527528 ZCCHC6Q5VYS8 1495 aaKnown RBP15.25■□□□□ 0.03
AP003066.1-201ENST00000527528 DCAF1Q9Y4B6 1507 aa15.24■□□□□ 0.03
AP003066.1-201ENST00000527528 SHROOM4Q9ULL8 1493 aa15.21■□□□□ 0.02
AP003066.1-201ENST00000527528 SCRIBQ14160 1630 aa15.11■□□□□ 0.01
AP003066.1-201ENST00000527528 CECR2Q9BXF3 1484 aa15.06■□□□□ 0
AP003066.1-201ENST00000527528 CC2D2AQ9P2K1 1620 aa15.05■□□□□ 0
AP003066.1-201ENST00000527528 EIF4G1Q04637 1599 aaKnown RBP15□□□□□ -0.01
AP003066.1-201ENST00000527528 SCAF1Q9H7N4 1312 aaKnown RBP14.56□□□□□ -0.08
AP003066.1-201ENST00000527528 DNAJC5Q9H3Z4 198 aa14.53□□□□□ -0.08
AP003066.1-201ENST00000527528 DMRT2Q9Y5R5 561 aa14.51□□□□□ -0.09
AP003066.1-201ENST00000527528 NCAPD3P42695 1498 aa14.51□□□□□ -0.09
AP003066.1-201ENST00000527528 MAPK8IP2Q13387 824 aaPredicted RBP14.48□□□□□ -0.09
AP003066.1-201ENST00000527528 ERCC6Q03468 1493 aa14.46□□□□□ -0.09
AP003066.1-201ENST00000527528 CUX2O14529 1486 aa14.45□□□□□ -0.1
AP003066.1-201ENST00000527528 ATAD2BQ9ULI0 1458 aa14.45□□□□□ -0.1
AP003066.1-201ENST00000527528 SMARCA2P51531 1590 aa14.42□□□□□ -0.1
AP003066.1-201ENST00000527528 PPP4R3CPQ6ZMV5 832 aa14.41□□□□□ -0.1
AP003066.1-201ENST00000527528 SMARCA4P51532 1647 aa14.39□□□□□ -0.11
AP003066.1-201ENST00000527528 HMGXB3Q12766 1538 aa14.39□□□□□ -0.11
AP003066.1-201ENST00000527528 CACNB1Q02641 598 aaPredicted RBP14.35□□□□□ -0.11
AP003066.1-201ENST00000527528 BAZ1AQ9NRL2 1556 aaPredicted RBP14.34□□□□□ -0.11
AP003066.1-201ENST00000527528 BAZ1BQ9UIG0 1483 aaKnown RBP14.32□□□□□ -0.12
AP003066.1-201ENST00000527528 NESP48681 1621 aa14.28□□□□□ -0.12
AP003066.1-201ENST00000527528 PEG3Q9GZU2 1588 aa14.26□□□□□ -0.13
AP003066.1-201ENST00000527528 LAMC3Q9Y6N6 1575 aa14.2□□□□□ -0.14
AP003066.1-201ENST00000527528 MROH2BQ7Z745 1585 aa14.18□□□□□ -0.14
AP003066.1-201ENST00000527528 PDS5BQ9NTI5 1447 aa14.16□□□□□ -0.14
AP003066.1-201ENST00000527528 THOC2Q8NI27 1593 aaKnown RBP14.15□□□□□ -0.14
AP003066.1-201ENST00000527528 CNKSR2Q8WXI2 1034 aa14.09□□□□□ -0.15
AP003066.1-201ENST00000527528 CADPSQ9ULU8 1353 aa14.08□□□□□ -0.16
AP003066.1-201ENST00000527528 KIF21AQ7Z4S6 1674 aa14.08□□□□□ -0.16
AP003066.1-201ENST00000527528 MRC2Q9UBG0 1479 aa14.02□□□□□ -0.17
AP003066.1-201ENST00000527528 WIZO95785 1651 aa14.01□□□□□ -0.17
AP003066.1-201ENST00000527528 WDR62O43379 1518 aa13.97□□□□□ -0.17
AP003066.1-201ENST00000527528 NCBP3Q53F19 620 aaKnown RBP13.96□□□□□ -0.17
AP003066.1-201ENST00000527528 CEP164Q9UPV0 1460 aa13.94□□□□□ -0.18
AP003066.1-201ENST00000527528 HOXD11P31277 338 aaPredicted RBP13.93□□□□□ -0.18
AP003066.1-201ENST00000527528 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
AP003066.1-201ENST00000527528 FANCD2Q9BXW9 1451 aa13.91□□□□□ -0.18
AP003066.1-201ENST00000527528 RNF216Q9NWF9 866 aaPredicted RBP13.9□□□□□ -0.18
AP003066.1-201ENST00000527528 CFTRP13569 1480 aa13.88□□□□□ -0.19
AP003066.1-201ENST00000527528 TRIM41Q8WV44 630 aa13.87□□□□□ -0.19
AP003066.1-201ENST00000527528 RSF1Q96T23 1441 aaPredicted RBP13.87□□□□□ -0.19
AP003066.1-201ENST00000527528 RNF39Q9H2S5 420 aa13.87□□□□□ -0.19
AP003066.1-201ENST00000527528 TOP2AP11388 1531 aaKnown RBP13.85□□□□□ -0.19
AP003066.1-201ENST00000527528 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
AP003066.1-201ENST00000527528 URB2Q14146 1524 aaKnown RBP13.77□□□□□ -0.21
AP003066.1-201ENST00000527528 NPM3O75607 178 aaKnown RBP13.72□□□□□ -0.21
AP003066.1-201ENST00000527528 PRDM2Q13029 1718 aa13.7□□□□□ -0.22
AP003066.1-201ENST00000527528 CCDC88BA6NC98 1476 aa13.69□□□□□ -0.22
AP003066.1-201ENST00000527528 IFT140Q96RY7 1462 aa13.68□□□□□ -0.22
AP003066.1-201ENST00000527528 C1QBPQ07021 282 aaKnown RBP13.68□□□□□ -0.22
AP003066.1-201ENST00000527528 KCNA4P22459 653 aa13.65□□□□□ -0.22
AP003066.1-201ENST00000527528 ABCC8Q09428 1581 aa13.64□□□□□ -0.23
AP003066.1-201ENST00000527528 TOPBP1Q92547 1522 aa13.62□□□□□ -0.23
AP003066.1-201ENST00000527528 ZNF608Q9ULD9 1512 aaPredicted RBP13.62□□□□□ -0.23
AP003066.1-201ENST00000527528 DNMBPQ6XZF7 1577 aa13.57□□□□□ -0.24
AP003066.1-201ENST00000527528 RIMBP3CA6NJZ7 1639 aa13.56□□□□□ -0.24
AP003066.1-201ENST00000527528 RIMBP3BA6NNM3 1639 aa13.56□□□□□ -0.24
AP003066.1-201ENST00000527528 RIMBP3Q9UFD9 1639 aa13.56□□□□□ -0.24
AP003066.1-201ENST00000527528 EIF4G3O43432 1585 aaKnown RBP13.55□□□□□ -0.24
AP003066.1-201ENST00000527528 ARHGEF11O15085 1522 aa13.52□□□□□ -0.25
AP003066.1-201ENST00000527528 AQRO60306 1485 aaKnown RBP eCLIP13.5□□□□□ -0.25
AP003066.1-201ENST00000527528 FBLN2P98095 1184 aa13.49□□□□□ -0.25
AP003066.1-201ENST00000527528 TARBP1Q13395 1621 aaKnown RBP13.48□□□□□ -0.25
AP003066.1-201ENST00000527528 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
AP003066.1-201ENST00000527528 CYB5RLQ6IPT4 315 aa13.46□□□□□ -0.26
AP003066.1-201ENST00000527528 SOGA1O94964 1423 aa13.44□□□□□ -0.26
AP003066.1-201ENST00000527528 CHD1O14646 1710 aa13.44□□□□□ -0.26
AP003066.1-201ENST00000527528 RAD54L2Q9Y4B4 1467 aa13.42□□□□□ -0.26
AP003066.1-201ENST00000527528 TDRD9Q8NDG6 1382 aaKnown RBP13.41□□□□□ -0.26
AP003066.1-201ENST00000527528 WDR97A6NE52 1622 aa13.4□□□□□ -0.26
AP003066.1-201ENST00000527528 FGD5Q6ZNL6 1462 aa13.39□□□□□ -0.27
AP003066.1-201ENST00000527528 CHMP7Q8WUX9 453 aaPredicted RBP13.38□□□□□ -0.27
AP003066.1-201ENST00000527528 TRHP20396 242 aaPredicted RBP13.37□□□□□ -0.27
AP003066.1-201ENST00000527528 SNAPC4Q5SXM2 1469 aa13.37□□□□□ -0.27
AP003066.1-201ENST00000527528 ARAP1Q96P48 1450 aa13.37□□□□□ -0.27
AP003066.1-201ENST00000527528 MAGI1Q96QZ7 1491 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms