RNA–Protein interactions for RNA: ENST00000527380.1

PACS1-206, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-206ENST00000527380 AEBP2Q6ZN18 517 aaPredicted RBP19.72■□□□□ 0.75
PACS1-206ENST00000527380 CHIC1Q5VXU3 224 aa18.46■□□□□ 0.55
PACS1-206ENST00000527380 SENP3Q9H4L4 574 aaPredicted RBP16.76■□□□□ 0.27
PACS1-206ENST00000527380 PHF23Q9BUL5 403 aaPredicted RBP16.55■□□□□ 0.24
PACS1-206ENST00000527380 FOXD1Q16676 465 aa15.72■□□□□ 0.11
PACS1-206ENST00000527380 NISCHQ9Y2I1 1504 aa15.72■□□□□ 0.11
PACS1-206ENST00000527380 POTEDQ86YR6 584 aa14.84□□□□□ -0.03
PACS1-206ENST00000527380 MSH5O43196 834 aa14.72□□□□□ -0.05
PACS1-206ENST00000527380 PLPPR3Q6T4P5 718 aa14.58□□□□□ -0.08
PACS1-206ENST00000527380 PIAS4Q8N2W9 510 aaPredicted RBP14.55□□□□□ -0.08
PACS1-206ENST00000527380 PPP6R1Q9UPN7 881 aa14.55□□□□□ -0.08
PACS1-206ENST00000527380 ADRA2BP18089 450 aa14.44□□□□□ -0.1
PACS1-206ENST00000527380 CCDC180Q9P1Z9 1646 aa13.87□□□□□ -0.19
PACS1-206ENST00000527380 MAPK8IP2Q13387 824 aaPredicted RBP13.35□□□□□ -0.27
PACS1-206ENST00000527380 DMRT2Q9Y5R5 561 aa13.3□□□□□ -0.28
PACS1-206ENST00000527380 ABCC9O60706 1549 aa13.17□□□□□ -0.3
PACS1-206ENST00000527380 ZCCHC6Q5VYS8 1495 aaKnown RBP13.16□□□□□ -0.3
PACS1-206ENST00000527380 SCAF1Q9H7N4 1312 aaKnown RBP13.12□□□□□ -0.31
PACS1-206ENST00000527380 DCAF1Q9Y4B6 1507 aa13.06□□□□□ -0.32
PACS1-206ENST00000527380 MYO15BQ96JP2 1530 aa13□□□□□ -0.33
PACS1-206ENST00000527380 DCAF8L2P0C7V8 631 aa12.97□□□□□ -0.33
PACS1-206ENST00000527380 NACADO15069 1562 aa12.95□□□□□ -0.34
PACS1-206ENST00000527380 RB1CC1Q8TDY2 1594 aa12.89□□□□□ -0.35
PACS1-206ENST00000527380 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
PACS1-206ENST00000527380 CACNB1Q02641 598 aaPredicted RBP12.76□□□□□ -0.37
PACS1-206ENST00000527380 HOXD11P31277 338 aaPredicted RBP12.74□□□□□ -0.37
PACS1-206ENST00000527380 DCAF8L1A6NGE4 600 aa12.63□□□□□ -0.39
PACS1-206ENST00000527380 SCRIBQ14160 1630 aa12.62□□□□□ -0.39
PACS1-206ENST00000527380 RNF39Q9H2S5 420 aa12.6□□□□□ -0.39
PACS1-206ENST00000527380 CNKSR2Q8WXI2 1034 aa12.58□□□□□ -0.4
PACS1-206ENST00000527380 SHROOM4Q9ULL8 1493 aa12.57□□□□□ -0.4
PACS1-206ENST00000527380 UNC13AQ9UPW8 1703 aa12.55□□□□□ -0.4
PACS1-206ENST00000527380 RNF216Q9NWF9 866 aaPredicted RBP12.54□□□□□ -0.4
PACS1-206ENST00000527380 BICRAQ9NZM4 1560 aa12.41□□□□□ -0.42
PACS1-206ENST00000527380 C1QBPQ07021 282 aaKnown RBP12.37□□□□□ -0.43
PACS1-206ENST00000527380 DNAJC5BQ9UF47 199 aa12.35□□□□□ -0.43
PACS1-206ENST00000527380 PABPN1Q86U42 306 aaKnown RBP eCLIP12.34□□□□□ -0.43
PACS1-206ENST00000527380 BAZ1AQ9NRL2 1556 aaPredicted RBP12.19□□□□□ -0.46
PACS1-206ENST00000527380 CECR2Q9BXF3 1484 aa12.15□□□□□ -0.46
PACS1-206ENST00000527380 NCBP3Q53F19 620 aaKnown RBP12.14□□□□□ -0.47
PACS1-206ENST00000527380 SMARCA4P51532 1647 aa12.13□□□□□ -0.47
PACS1-206ENST00000527380 EIF4G1Q04637 1599 aaKnown RBP12.09□□□□□ -0.47
PACS1-206ENST00000527380 MROH2BQ7Z745 1585 aa12.09□□□□□ -0.47
PACS1-206ENST00000527380 RSF1Q96T23 1441 aaPredicted RBP12.08□□□□□ -0.48
PACS1-206ENST00000527380 NPM3O75607 178 aaKnown RBP12.05□□□□□ -0.48
PACS1-206ENST00000527380 PEG3Q9GZU2 1588 aa12.02□□□□□ -0.49
PACS1-206ENST00000527380 SUPT5HO00267 1087 aaKnown RBP12.02□□□□□ -0.49
PACS1-206ENST00000527380 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.02□□□□□ -0.49
PACS1-206ENST00000527380 SMARCA2P51531 1590 aa12.01□□□□□ -0.49
PACS1-206ENST00000527380 WIZO95785 1651 aa11.98□□□□□ -0.49
PACS1-206ENST00000527380 ATAD2BQ9ULI0 1458 aa11.96□□□□□ -0.49
PACS1-206ENST00000527380 CC2D2AQ9P2K1 1620 aa11.95□□□□□ -0.5
PACS1-206ENST00000527380 NCAPD3P42695 1498 aa11.92□□□□□ -0.5
PACS1-206ENST00000527380 TOP2AP11388 1531 aaKnown RBP11.91□□□□□ -0.5
PACS1-206ENST00000527380 HMGXB3Q12766 1538 aa11.91□□□□□ -0.5
PACS1-206ENST00000527380 BAZ1BQ9UIG0 1483 aaKnown RBP11.91□□□□□ -0.5
PACS1-206ENST00000527380 U3KPZ7 1027 aaPredicted RBP11.84□□□□□ -0.51
PACS1-206ENST00000527380 CCDC88BA6NC98 1476 aa11.74□□□□□ -0.53
PACS1-206ENST00000527380 SPINK5Q9NQ38 1064 aaPredicted RBP11.73□□□□□ -0.53
PACS1-206ENST00000527380 DSG3P32926 999 aa11.72□□□□□ -0.53
PACS1-206ENST00000527380 CAPN15O75808 1086 aa11.64□□□□□ -0.55
PACS1-206ENST00000527380 SLC4A2P04920 1241 aa11.62□□□□□ -0.55
PACS1-206ENST00000527380 KCNA4P22459 653 aa11.61□□□□□ -0.55
PACS1-206ENST00000527380 CFTRP13569 1480 aa11.59□□□□□ -0.55
PACS1-206ENST00000527380 CADPSQ9ULU8 1353 aa11.59□□□□□ -0.55
PACS1-206ENST00000527380 PRDM2Q13029 1718 aa11.58□□□□□ -0.56
PACS1-206ENST00000527380 LAMC3Q9Y6N6 1575 aa11.58□□□□□ -0.56
PACS1-206ENST00000527380 POTEHQ6S545 545 aa11.55□□□□□ -0.56
PACS1-206ENST00000527380 PDS5BQ9NTI5 1447 aa11.5□□□□□ -0.57
PACS1-206ENST00000527380 NESP48681 1621 aa11.47□□□□□ -0.57
PACS1-206ENST00000527380 FANCD2Q9BXW9 1451 aa11.45□□□□□ -0.58
PACS1-206ENST00000527380 CEP164Q9UPV0 1460 aa11.43□□□□□ -0.58
PACS1-206ENST00000527380 WRNQ14191 1432 aaPredicted RBP eCLIP11.41□□□□□ -0.58
PACS1-206ENST00000527380 TRHP20396 242 aaPredicted RBP11.4□□□□□ -0.58
PACS1-206ENST00000527380 ABCC8Q09428 1581 aa11.4□□□□□ -0.58
PACS1-206ENST00000527380 TRIM41Q8WV44 630 aa11.39□□□□□ -0.59
PACS1-206ENST00000527380 KIF21AQ7Z4S6 1674 aa11.39□□□□□ -0.59
PACS1-206ENST00000527380 ABCB7O75027 752 aa11.38□□□□□ -0.59
PACS1-206ENST00000527380 ERCC6Q03468 1493 aa11.38□□□□□ -0.59
PACS1-206ENST00000527380 ZNF219Q9P2Y4 722 aaPredicted RBP11.37□□□□□ -0.59
PACS1-206ENST00000527380 TOP2BQ02880 1626 aa11.35□□□□□ -0.59
PACS1-206ENST00000527380 BIVM-ERCC5R4GMW8 1640 aa11.35□□□□□ -0.59
PACS1-206ENST00000527380 APLP2Q06481 763 aa11.35□□□□□ -0.59
PACS1-206ENST00000527380 DNMBPQ6XZF7 1577 aa11.34□□□□□ -0.59
PACS1-206ENST00000527380 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
PACS1-206ENST00000527380 MRC2Q9UBG0 1479 aa11.33□□□□□ -0.6
PACS1-206ENST00000527380 CUX1P39880 1505 aa11.33□□□□□ -0.6
PACS1-206ENST00000527380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.31□□□□□ -0.6
PACS1-206ENST00000527380 HNRNPUL2Q1KMD3 747 aaKnown RBP11.31□□□□□ -0.6
PACS1-206ENST00000527380 TOPBP1Q92547 1522 aa11.3□□□□□ -0.6
PACS1-206ENST00000527380 URB2Q14146 1524 aaKnown RBP11.29□□□□□ -0.6
PACS1-206ENST00000527380 WDR62O43379 1518 aa11.28□□□□□ -0.6
PACS1-206ENST00000527380 THOC2Q8NI27 1593 aaKnown RBP11.27□□□□□ -0.61
PACS1-206ENST00000527380 SAMD1Q6SPF0 538 aaPredicted RBP11.26□□□□□ -0.61
PACS1-206ENST00000527380 FGD5Q6ZNL6 1462 aa11.25□□□□□ -0.61
PACS1-206ENST00000527380 POLA1P09884 1462 aaPredicted RBP11.23□□□□□ -0.61
PACS1-206ENST00000527380 EEA1Q15075 1411 aa11.22□□□□□ -0.61
PACS1-206ENST00000527380 SOGA1O94964 1423 aa11.19□□□□□ -0.62
PACS1-206ENST00000527380 ABCA10Q8WWZ4 1543 aa11.18□□□□□ -0.62
PACS1-206ENST00000527380 IFT140Q96RY7 1462 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms