RNA–Protein interactions for RNA: ENST00000526067.1

ARHGEF12-205, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 3

Gene ARHGEF12, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-205ENST00000526067 AEBP2Q6ZN18 517 aaPredicted RBP25.7■■□□□ 1.71
ARHGEF12-205ENST00000526067 CHIC1Q5VXU3 224 aa23.97■■□□□ 1.43
ARHGEF12-205ENST00000526067 SENP3Q9H4L4 574 aaPredicted RBP21.85■■□□□ 1.09
ARHGEF12-205ENST00000526067 PHF23Q9BUL5 403 aaPredicted RBP21.56■■□□□ 1.04
ARHGEF12-205ENST00000526067 NISCHQ9Y2I1 1504 aa21.3■■□□□ 1
ARHGEF12-205ENST00000526067 FOXD1Q16676 465 aa20.5■□□□□ 0.87
ARHGEF12-205ENST00000526067 POTEDQ86YR6 584 aa19.83■□□□□ 0.77
ARHGEF12-205ENST00000526067 ABCC9O60706 1549 aa19.59■□□□□ 0.73
ARHGEF12-205ENST00000526067 MSH5O43196 834 aa19.23■□□□□ 0.67
ARHGEF12-205ENST00000526067 CCDC180Q9P1Z9 1646 aa19.17■□□□□ 0.66
ARHGEF12-205ENST00000526067 PIAS4Q8N2W9 510 aaPredicted RBP18.98■□□□□ 0.63
ARHGEF12-205ENST00000526067 DNAJC5BQ9UF47 199 aa18.95■□□□□ 0.62
ARHGEF12-205ENST00000526067 PLPPR3Q6T4P5 718 aa18.92■□□□□ 0.62
ARHGEF12-205ENST00000526067 PPP6R1Q9UPN7 881 aa18.91■□□□□ 0.62
ARHGEF12-205ENST00000526067 ADRA2BP18089 450 aa18.78■□□□□ 0.6
ARHGEF12-205ENST00000526067 RB1CC1Q8TDY2 1594 aa18.48■□□□□ 0.55
ARHGEF12-205ENST00000526067 NACADO15069 1562 aa18.31■□□□□ 0.52
ARHGEF12-205ENST00000526067 PABPN1Q86U42 306 aaKnown RBP eCLIP18.26■□□□□ 0.51
ARHGEF12-205ENST00000526067 DCAF8L2P0C7V8 631 aa18.11■□□□□ 0.49
ARHGEF12-205ENST00000526067 MYO15BQ96JP2 1530 aa18.04■□□□□ 0.48
ARHGEF12-205ENST00000526067 BICRAQ9NZM4 1560 aa18.01■□□□□ 0.47
ARHGEF12-205ENST00000526067 UNC13AQ9UPW8 1703 aa17.97■□□□□ 0.47
ARHGEF12-205ENST00000526067 SHROOM4Q9ULL8 1493 aa17.76■□□□□ 0.43
ARHGEF12-205ENST00000526067 CECR2Q9BXF3 1484 aa17.73■□□□□ 0.43
ARHGEF12-205ENST00000526067 DNAJC5Q9H3Z4 198 aa17.72■□□□□ 0.43
ARHGEF12-205ENST00000526067 CC2D2AQ9P2K1 1620 aa17.67■□□□□ 0.42
ARHGEF12-205ENST00000526067 DCAF1Q9Y4B6 1507 aa17.61■□□□□ 0.41
ARHGEF12-205ENST00000526067 EIF4G1Q04637 1599 aaKnown RBP17.56■□□□□ 0.4
ARHGEF12-205ENST00000526067 ZCCHC6Q5VYS8 1495 aaKnown RBP17.53■□□□□ 0.4
ARHGEF12-205ENST00000526067 MAPK8IP2Q13387 824 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF12-205ENST00000526067 SCRIBQ14160 1630 aa17.37■□□□□ 0.37
ARHGEF12-205ENST00000526067 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
ARHGEF12-205ENST00000526067 CUX2O14529 1486 aa17.12■□□□□ 0.33
ARHGEF12-205ENST00000526067 SCAF1Q9H7N4 1312 aaKnown RBP17.07■□□□□ 0.32
ARHGEF12-205ENST00000526067 NCAPD3P42695 1498 aa17.01■□□□□ 0.31
ARHGEF12-205ENST00000526067 ERCC6Q03468 1493 aa16.91■□□□□ 0.3
ARHGEF12-205ENST00000526067 ATAD2BQ9ULI0 1458 aa16.84■□□□□ 0.29
ARHGEF12-205ENST00000526067 NESP48681 1621 aa16.74■□□□□ 0.27
ARHGEF12-205ENST00000526067 HMGXB3Q12766 1538 aa16.73■□□□□ 0.27
ARHGEF12-205ENST00000526067 CACNB1Q02641 598 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF12-205ENST00000526067 SMARCA2P51531 1590 aa16.7■□□□□ 0.26
ARHGEF12-205ENST00000526067 SMARCA4P51532 1647 aa16.61■□□□□ 0.25
ARHGEF12-205ENST00000526067 THOC2Q8NI27 1593 aaKnown RBP16.59■□□□□ 0.25
ARHGEF12-205ENST00000526067 PPP4R3CPQ6ZMV5 832 aa16.58■□□□□ 0.24
ARHGEF12-205ENST00000526067 TRIM41Q8WV44 630 aa16.57■□□□□ 0.24
ARHGEF12-205ENST00000526067 LAMC3Q9Y6N6 1575 aa16.56■□□□□ 0.24
ARHGEF12-205ENST00000526067 BAZ1BQ9UIG0 1483 aaKnown RBP16.56■□□□□ 0.24
ARHGEF12-205ENST00000526067 HOXD11P31277 338 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF12-205ENST00000526067 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
ARHGEF12-205ENST00000526067 PDS5BQ9NTI5 1447 aa16.54■□□□□ 0.24
ARHGEF12-205ENST00000526067 DCAF8L1A6NGE4 600 aa16.51■□□□□ 0.23
ARHGEF12-205ENST00000526067 BAZ1AQ9NRL2 1556 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF12-205ENST00000526067 CADPSQ9ULU8 1353 aa16.45■□□□□ 0.22
ARHGEF12-205ENST00000526067 RNF39Q9H2S5 420 aa16.44■□□□□ 0.22
ARHGEF12-205ENST00000526067 KIF21AQ7Z4S6 1674 aa16.39■□□□□ 0.21
ARHGEF12-205ENST00000526067 MROH2BQ7Z745 1585 aa16.37■□□□□ 0.21
ARHGEF12-205ENST00000526067 OSCARQ8IYS5 282 aa16.37■□□□□ 0.21
ARHGEF12-205ENST00000526067 MRC2Q9UBG0 1479 aa16.36■□□□□ 0.21
ARHGEF12-205ENST00000526067 WDR62O43379 1518 aa16.33■□□□□ 0.2
ARHGEF12-205ENST00000526067 CNKSR2Q8WXI2 1034 aa16.33■□□□□ 0.2
ARHGEF12-205ENST00000526067 RNF216Q9NWF9 866 aaPredicted RBP16.29■□□□□ 0.2
ARHGEF12-205ENST00000526067 CEP164Q9UPV0 1460 aa16.19■□□□□ 0.18
ARHGEF12-205ENST00000526067 FANCD2Q9BXW9 1451 aa16.17■□□□□ 0.18
ARHGEF12-205ENST00000526067 CFTRP13569 1480 aa16.16■□□□□ 0.18
ARHGEF12-205ENST00000526067 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
ARHGEF12-205ENST00000526067 WIZO95785 1651 aa16.08■□□□□ 0.16
ARHGEF12-205ENST00000526067 URB2Q14146 1524 aaKnown RBP16.07■□□□□ 0.16
ARHGEF12-205ENST00000526067 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
ARHGEF12-205ENST00000526067 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
ARHGEF12-205ENST00000526067 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
ARHGEF12-205ENST00000526067 ARHGEF11O15085 1522 aa15.96■□□□□ 0.15
ARHGEF12-205ENST00000526067 CYB5RLQ6IPT4 315 aa15.95■□□□□ 0.14
ARHGEF12-205ENST00000526067 RSF1Q96T23 1441 aaPredicted RBP15.95■□□□□ 0.14
ARHGEF12-205ENST00000526067 IFT140Q96RY7 1462 aa15.94■□□□□ 0.14
ARHGEF12-205ENST00000526067 ZNF608Q9ULD9 1512 aaPredicted RBP15.93■□□□□ 0.14
ARHGEF12-205ENST00000526067 TOP2AP11388 1531 aaKnown RBP15.88■□□□□ 0.13
ARHGEF12-205ENST00000526067 TRHP20396 242 aaPredicted RBP15.84■□□□□ 0.13
ARHGEF12-205ENST00000526067 TOPBP1Q92547 1522 aa15.82■□□□□ 0.12
ARHGEF12-205ENST00000526067 ABCC8Q09428 1581 aa15.82■□□□□ 0.12
ARHGEF12-205ENST00000526067 ARAP1Q96P48 1450 aa15.8■□□□□ 0.12
ARHGEF12-205ENST00000526067 CCDC88BA6NC98 1476 aa15.78■□□□□ 0.12
ARHGEF12-205ENST00000526067 AQRO60306 1485 aaKnown RBP eCLIP15.76■□□□□ 0.112e-7■■■■□ 21.9
ARHGEF12-205ENST00000526067 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
ARHGEF12-205ENST00000526067 PRDM2Q13029 1718 aa15.73■□□□□ 0.11
ARHGEF12-205ENST00000526067 EIF4G3O43432 1585 aaKnown RBP15.71■□□□□ 0.11
ARHGEF12-205ENST00000526067 FBLN2P98095 1184 aa15.7■□□□□ 0.1
ARHGEF12-205ENST00000526067 TARBP1Q13395 1621 aaKnown RBP15.7■□□□□ 0.1
ARHGEF12-205ENST00000526067 DNMBPQ6XZF7 1577 aa15.69■□□□□ 0.1
ARHGEF12-205ENST00000526067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.67■□□□□ 0.14e-7■■■■□ 19.8
ARHGEF12-205ENST00000526067 CHD1O14646 1710 aa15.64■□□□□ 0.09
ARHGEF12-205ENST00000526067 POLA1P09884 1462 aaPredicted RBP15.64■□□□□ 0.09
ARHGEF12-205ENST00000526067 TDRD9Q8NDG6 1382 aaKnown RBP15.62■□□□□ 0.09
ARHGEF12-205ENST00000526067 NPM3O75607 178 aaKnown RBP15.62■□□□□ 0.09
ARHGEF12-205ENST00000526067 SOGA1O94964 1423 aa15.61■□□□□ 0.09
ARHGEF12-205ENST00000526067 CHMP7Q8WUX9 453 aaPredicted RBP15.59■□□□□ 0.09
ARHGEF12-205ENST00000526067 RAD54L2Q9Y4B4 1467 aa15.59■□□□□ 0.09
ARHGEF12-205ENST00000526067 CLASP1Q7Z460 1538 aa15.58■□□□□ 0.09
ARHGEF12-205ENST00000526067 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.08
ARHGEF12-205ENST00000526067 MAGI1Q96QZ7 1491 aaPredicted RBP15.52■□□□□ 0.08
ARHGEF12-205ENST00000526067 WDR97A6NE52 1622 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms