RNA–Protein interactions for RNA: ENST00000525222.1

ARHGEF12-203, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 5

Gene ARHGEF12, Length 2,795 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-203ENST00000525222 NISCHQ9Y2I1 1504 aa19.44■□□□□ 0.7
ARHGEF12-203ENST00000525222 CHIC1Q5VXU3 224 aa18.21■□□□□ 0.51
ARHGEF12-203ENST00000525222 AEBP2Q6ZN18 517 aaPredicted RBP18.03■□□□□ 0.48
ARHGEF12-203ENST00000525222 SHROOM4Q9ULL8 1493 aa16.63■□□□□ 0.25
ARHGEF12-203ENST00000525222 CCDC180Q9P1Z9 1646 aa16.5■□□□□ 0.23
ARHGEF12-203ENST00000525222 ZCCHC6Q5VYS8 1495 aaKnown RBP16.43■□□□□ 0.22
ARHGEF12-203ENST00000525222 SUPT5HO00267 1087 aaKnown RBP16.26■□□□□ 0.19
ARHGEF12-203ENST00000525222 DCAF8L2P0C7V8 631 aa16.21■□□□□ 0.18
ARHGEF12-203ENST00000525222 PHF23Q9BUL5 403 aaPredicted RBP16.01■□□□□ 0.15
ARHGEF12-203ENST00000525222 DCAF1Q9Y4B6 1507 aa15.9■□□□□ 0.14
ARHGEF12-203ENST00000525222 MYO15BQ96JP2 1530 aa15.72■□□□□ 0.11
ARHGEF12-203ENST00000525222 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
ARHGEF12-203ENST00000525222 ABCC9O60706 1549 aa15.49■□□□□ 0.07
ARHGEF12-203ENST00000525222 RSF1Q96T23 1441 aaPredicted RBP15.38■□□□□ 0.05
ARHGEF12-203ENST00000525222 LOC105371045A0A1W2PR82 267 aa15.34■□□□□ 0.05
ARHGEF12-203ENST00000525222 SENP3Q9H4L4 574 aaPredicted RBP15.3■□□□□ 0.04
ARHGEF12-203ENST00000525222 NACADO15069 1562 aa15.28■□□□□ 0.04
ARHGEF12-203ENST00000525222 RB1CC1Q8TDY2 1594 aa15.23■□□□□ 0.03
ARHGEF12-203ENST00000525222 PCGF6Q9BYE7 350 aa15.23■□□□□ 0.03
ARHGEF12-203ENST00000525222 CECR2Q9BXF3 1484 aa15.22■□□□□ 0.03
ARHGEF12-203ENST00000525222 HRCP23327 699 aa15.16■□□□□ 0.02
ARHGEF12-203ENST00000525222 MROH2BQ7Z745 1585 aa15.15■□□□□ 0.02
ARHGEF12-203ENST00000525222 TRIM41Q8WV44 630 aa15.11■□□□□ 0.01
ARHGEF12-203ENST00000525222 WIZO95785 1651 aa15.07■□□□□ 0
ARHGEF12-203ENST00000525222 FAM9AQ8IZU1 332 aaPredicted RBP15.04■□□□□ -0
ARHGEF12-203ENST00000525222 PLPPR3Q6T4P5 718 aa15.02■□□□□ -0
ARHGEF12-203ENST00000525222 EHMT2Q96KQ7 1210 aa14.96□□□□□ -0.01
ARHGEF12-203ENST00000525222 PPARGC1BQ86YN6 1023 aaKnown RBP14.94□□□□□ -0.02
ARHGEF12-203ENST00000525222 BAZ1AQ9NRL2 1556 aaPredicted RBP14.92□□□□□ -0.02
ARHGEF12-203ENST00000525222 TRIM26Q12899 539 aaPredicted RBP14.9□□□□□ -0.02
ARHGEF12-203ENST00000525222 UNC13AQ9UPW8 1703 aa14.88□□□□□ -0.03
ARHGEF12-203ENST00000525222 EIF4G1Q04637 1599 aaKnown RBP14.82□□□□□ -0.04
ARHGEF12-203ENST00000525222 SMARCA4P51532 1647 aa14.82□□□□□ -0.04
ARHGEF12-203ENST00000525222 TOP2AP11388 1531 aaKnown RBP14.78□□□□□ -0.04
ARHGEF12-203ENST00000525222 PABPN1Q86U42 306 aaKnown RBP eCLIP14.77□□□□□ -0.04
ARHGEF12-203ENST00000525222 CCDC88BA6NC98 1476 aa14.75□□□□□ -0.05
ARHGEF12-203ENST00000525222 ABCC8Q09428 1581 aa14.73□□□□□ -0.05
ARHGEF12-203ENST00000525222 SMARCA2P51531 1590 aa14.72□□□□□ -0.05
ARHGEF12-203ENST00000525222 BICRAQ9NZM4 1560 aa14.7□□□□□ -0.06
ARHGEF12-203ENST00000525222 SOGA1O94964 1423 aa14.57□□□□□ -0.08
ARHGEF12-203ENST00000525222 RUSC2Q8N2Y8 1516 aa14.52□□□□□ -0.08
ARHGEF12-203ENST00000525222 PEG3Q9GZU2 1588 aa14.5□□□□□ -0.09
ARHGEF12-203ENST00000525222 ZEB1P37275 1124 aaPredicted RBP14.49□□□□□ -0.09
ARHGEF12-203ENST00000525222 ATAD2BQ9ULI0 1458 aa14.46□□□□□ -0.1
ARHGEF12-203ENST00000525222 CEP162Q5TB80 1403 aa14.45□□□□□ -0.1
ARHGEF12-203ENST00000525222 TTBK1Q5TCY1 1321 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF12-203ENST00000525222 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
ARHGEF12-203ENST00000525222 WRNQ14191 1432 aaPredicted RBP eCLIP14.44□□□□□ -0.1
ARHGEF12-203ENST00000525222 BAZ1BQ9UIG0 1483 aaKnown RBP14.41□□□□□ -0.1
ARHGEF12-203ENST00000525222 UBTFP17480 764 aaKnown RBP14.41□□□□□ -0.1
ARHGEF12-203ENST00000525222 TNIKQ9UKE5 1360 aa14.4□□□□□ -0.1
ARHGEF12-203ENST00000525222 SYNJ1O43426 1573 aa14.4□□□□□ -0.1
ARHGEF12-203ENST00000525222 EEA1Q15075 1411 aa14.39□□□□□ -0.11
ARHGEF12-203ENST00000525222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.38□□□□□ -0.11
ARHGEF12-203ENST00000525222 GOLGA3Q08378 1498 aa14.33□□□□□ -0.11
ARHGEF12-203ENST00000525222 CCER1Q8TC90 406 aaPredicted RBP14.3□□□□□ -0.12
ARHGEF12-203ENST00000525222 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
ARHGEF12-203ENST00000525222 KIF21BO75037 1637 aa14.23□□□□□ -0.13
ARHGEF12-203ENST00000525222 RAPGEF2Q9Y4G8 1499 aa14.21□□□□□ -0.13
ARHGEF12-203ENST00000525222 RANGAP1P46060 587 aaPredicted RBP14.2□□□□□ -0.14
ARHGEF12-203ENST00000525222 CLIP1P30622 1438 aa14.19□□□□□ -0.14
ARHGEF12-203ENST00000525222 TOP2BQ02880 1626 aa14.19□□□□□ -0.14
ARHGEF12-203ENST00000525222 SLC24A1O60721 1099 aa14.17□□□□□ -0.14
ARHGEF12-203ENST00000525222 NCAPD3P42695 1498 aa14.16□□□□□ -0.14
ARHGEF12-203ENST00000525222 HMGXB3Q12766 1538 aa14.14□□□□□ -0.15
ARHGEF12-203ENST00000525222 BIVM-ERCC5R4GMW8 1640 aa14.13□□□□□ -0.15
ARHGEF12-203ENST00000525222 VPS8Q8N3P4 1428 aa14.1□□□□□ -0.15
ARHGEF12-203ENST00000525222 CUX1P39880 1505 aa14.1□□□□□ -0.15
ARHGEF12-203ENST00000525222 HNRNPUL2Q1KMD3 747 aaKnown RBP14.08□□□□□ -0.16
ARHGEF12-203ENST00000525222 FOXD1Q16676 465 aa14.07□□□□□ -0.16
ARHGEF12-203ENST00000525222 CFTRP13569 1480 aa14.04□□□□□ -0.16
ARHGEF12-203ENST00000525222 PRXQ9BXM0 1461 aa14.04□□□□□ -0.16
ARHGEF12-203ENST00000525222 APLP2Q06481 763 aa14.02□□□□□ -0.16
ARHGEF12-203ENST00000525222 ERICH3Q5RHP9 1530 aa14□□□□□ -0.17
ARHGEF12-203ENST00000525222 ARAP1Q96P48 1450 aa13.98□□□□□ -0.17
ARHGEF12-203ENST00000525222 DIEXFQ68CQ4 756 aaKnown RBP13.98□□□□□ -0.17
ARHGEF12-203ENST00000525222 KIF27Q86VH2 1401 aa13.98□□□□□ -0.17
ARHGEF12-203ENST00000525222 SCAF1Q9H7N4 1312 aaKnown RBP13.96□□□□□ -0.17
ARHGEF12-203ENST00000525222 ADRA2BP18089 450 aa13.94□□□□□ -0.18
ARHGEF12-203ENST00000525222 KANK4Q5T7N3 995 aaPredicted RBP13.94□□□□□ -0.18
ARHGEF12-203ENST00000525222 PPP6R1Q9UPN7 881 aa13.91□□□□□ -0.18
ARHGEF12-203ENST00000525222 CADPSQ9ULU8 1353 aa13.9□□□□□ -0.18
ARHGEF12-203ENST00000525222 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
ARHGEF12-203ENST00000525222 CUX2O14529 1486 aa13.89□□□□□ -0.19
ARHGEF12-203ENST00000525222 ZNF316A6NFI3 1004 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF12-203ENST00000525222 ARHGAP35Q9NRY4 1499 aa13.87□□□□□ -0.19
ARHGEF12-203ENST00000525222 CC2D2AQ9P2K1 1620 aa13.86□□□□□ -0.19
ARHGEF12-203ENST00000525222 IGF1RP08069 1367 aa13.86□□□□□ -0.19
ARHGEF12-203ENST00000525222 FGD5Q6ZNL6 1462 aa13.85□□□□□ -0.19
ARHGEF12-203ENST00000525222 NEUROD1Q13562 356 aa13.84□□□□□ -0.19
ARHGEF12-203ENST00000525222 ACIN1Q9UKV3 1341 aaKnown RBP13.81□□□□□ -0.2
ARHGEF12-203ENST00000525222 CARMIL1Q5VZK9 1371 aa13.79□□□□□ -0.2
ARHGEF12-203ENST00000525222 FANCD2Q9BXW9 1451 aa13.78□□□□□ -0.2
ARHGEF12-203ENST00000525222 DHX57Q6P158 1386 aaKnown RBP13.77□□□□□ -0.21
ARHGEF12-203ENST00000525222 RRBP1Q9P2E9 1410 aaKnown RBP13.76□□□□□ -0.21
ARHGEF12-203ENST00000525222 NESP48681 1621 aa13.75□□□□□ -0.21
ARHGEF12-203ENST00000525222 ITGAEP38570 1179 aa13.75□□□□□ -0.21
ARHGEF12-203ENST00000525222 RAD54L2Q9Y4B4 1467 aa13.74□□□□□ -0.21
ARHGEF12-203ENST00000525222 CCNB3Q8WWL7 1395 aa13.73□□□□□ -0.21
ARHGEF12-203ENST00000525222 P3H3Q8IVL6 736 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms