RNA–Protein interactions for RNA: ENST00000525058.5

GIF-202, Transcript of gastric intrinsic factor, humanhuman

TSL 2

Gene GIF, Length 1,623 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIF-202ENST00000525058 CHIC1Q5VXU3 224 aa20.46■□□□□ 0.87
GIF-202ENST00000525058 AEBP2Q6ZN18 517 aaPredicted RBP20.2■□□□□ 0.82
GIF-202ENST00000525058 PHF23Q9BUL5 403 aaPredicted RBP18.03■□□□□ 0.48
GIF-202ENST00000525058 NISCHQ9Y2I1 1504 aa17.46■□□□□ 0.39
GIF-202ENST00000525058 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
GIF-202ENST00000525058 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
GIF-202ENST00000525058 ABCC9O60706 1549 aa16.95■□□□□ 0.3
GIF-202ENST00000525058 DNAJC5BQ9UF47 199 aa16.67■□□□□ 0.26
GIF-202ENST00000525058 CCDC180Q9P1Z9 1646 aa16.23■□□□□ 0.19
GIF-202ENST00000525058 DNAJC5Q9H3Z4 198 aa16.05■□□□□ 0.16
GIF-202ENST00000525058 ADRA2BP18089 450 aa15.83■□□□□ 0.13
GIF-202ENST00000525058 RB1CC1Q8TDY2 1594 aa15.83■□□□□ 0.12
GIF-202ENST00000525058 FOXD1Q16676 465 aa15.74■□□□□ 0.11
GIF-202ENST00000525058 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
GIF-202ENST00000525058 UNC13AQ9UPW8 1703 aa15.57■□□□□ 0.08
GIF-202ENST00000525058 PABPN1Q86U42 306 aaKnown RBP eCLIP15.54■□□□□ 0.08
GIF-202ENST00000525058 KCNA4P22459 653 aa15.5■□□□□ 0.07
GIF-202ENST00000525058 NACADO15069 1562 aa15.49■□□□□ 0.07
GIF-202ENST00000525058 CECR2Q9BXF3 1484 aa15.4■□□□□ 0.06
GIF-202ENST00000525058 BICRAQ9NZM4 1560 aa15.39■□□□□ 0.05
GIF-202ENST00000525058 EHMT2Q96KQ7 1210 aa15.38■□□□□ 0.05
GIF-202ENST00000525058 CC2D2AQ9P2K1 1620 aa15.35■□□□□ 0.05
GIF-202ENST00000525058 SHROOM4Q9ULL8 1493 aa15.15■□□□□ 0.02
GIF-202ENST00000525058 PIAS4Q8N2W9 510 aaPredicted RBP15.1■□□□□ 0.01
GIF-202ENST00000525058 CUX2O14529 1486 aa15.09■□□□□ 0.01
GIF-202ENST00000525058 EIF4G1Q04637 1599 aaKnown RBP15.09■□□□□ 0.01
GIF-202ENST00000525058 PPP4R3CPQ6ZMV5 832 aa15.05■□□□□ -0
GIF-202ENST00000525058 MYO15BQ96JP2 1530 aa14.99□□□□□ -0.01
GIF-202ENST00000525058 SLC4A1APQ9BWU0 796 aaKnown RBP14.95□□□□□ -0.02
GIF-202ENST00000525058 DCAF8L2P0C7V8 631 aa14.94□□□□□ -0.02
GIF-202ENST00000525058 NCBP3Q53F19 620 aaKnown RBP14.92□□□□□ -0.02
GIF-202ENST00000525058 TRIM41Q8WV44 630 aa14.89□□□□□ -0.03
GIF-202ENST00000525058 CSRNP3Q8WYN3 585 aa14.76□□□□□ -0.05
GIF-202ENST00000525058 ERCC6Q03468 1493 aa14.72□□□□□ -0.05
GIF-202ENST00000525058 NPM3O75607 178 aaKnown RBP14.63□□□□□ -0.07
GIF-202ENST00000525058 SCRIBQ14160 1630 aa14.6□□□□□ -0.07
GIF-202ENST00000525058 SCAF1Q9H7N4 1312 aaKnown RBP14.49□□□□□ -0.09
GIF-202ENST00000525058 CNKSR2Q8WXI2 1034 aa14.47□□□□□ -0.09
GIF-202ENST00000525058 THOC2Q8NI27 1593 aaKnown RBP14.46□□□□□ -0.09
GIF-202ENST00000525058 DCAF1Q9Y4B6 1507 aa14.43□□□□□ -0.1
GIF-202ENST00000525058 MSH5O43196 834 aa14.3□□□□□ -0.12
GIF-202ENST00000525058 ZCCHC6Q5VYS8 1495 aaKnown RBP14.29□□□□□ -0.12
GIF-202ENST00000525058 NESP48681 1621 aa14.29□□□□□ -0.12
GIF-202ENST00000525058 BAZ1AQ9NRL2 1556 aaPredicted RBP14.27□□□□□ -0.13
GIF-202ENST00000525058 NCAPD3P42695 1498 aa14.26□□□□□ -0.13
GIF-202ENST00000525058 ZBTB22O15209 634 aa14.23□□□□□ -0.13
GIF-202ENST00000525058 KIF21AQ7Z4S6 1674 aa14.21□□□□□ -0.13
GIF-202ENST00000525058 SMARCA2P51531 1590 aa14.21□□□□□ -0.13
GIF-202ENST00000525058 RIMBP3CA6NJZ7 1639 aa14.17□□□□□ -0.14
GIF-202ENST00000525058 RIMBP3BA6NNM3 1639 aa14.17□□□□□ -0.14
GIF-202ENST00000525058 RIMBP3Q9UFD9 1639 aa14.17□□□□□ -0.14
GIF-202ENST00000525058 LAMC3Q9Y6N6 1575 aa14.15□□□□□ -0.14
GIF-202ENST00000525058 HMGXB3Q12766 1538 aa14.13□□□□□ -0.15
GIF-202ENST00000525058 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
GIF-202ENST00000525058 FOXD4L1Q9NU39 408 aa14.09□□□□□ -0.15
GIF-202ENST00000525058 MAPK8IP2Q13387 824 aaPredicted RBP14.08□□□□□ -0.16
GIF-202ENST00000525058 ATAD2BQ9ULI0 1458 aa14.06□□□□□ -0.16
GIF-202ENST00000525058 WDR62O43379 1518 aa14.03□□□□□ -0.16
GIF-202ENST00000525058 PDS5BQ9NTI5 1447 aa14.02□□□□□ -0.17
GIF-202ENST00000525058 POTEDQ86YR6 584 aa14.01□□□□□ -0.17
GIF-202ENST00000525058 RNF216Q9NWF9 866 aaPredicted RBP13.99□□□□□ -0.17
GIF-202ENST00000525058 ARHGEF11O15085 1522 aa13.99□□□□□ -0.17
GIF-202ENST00000525058 MRC2Q9UBG0 1479 aa13.99□□□□□ -0.17
GIF-202ENST00000525058 TRHP20396 242 aaPredicted RBP13.97□□□□□ -0.17
GIF-202ENST00000525058 BAZ1BQ9UIG0 1483 aaKnown RBP13.88□□□□□ -0.19
GIF-202ENST00000525058 ILDR1Q86SU0 546 aaPredicted RBP13.87□□□□□ -0.19
GIF-202ENST00000525058 SMARCA4P51532 1647 aa13.87□□□□□ -0.19
GIF-202ENST00000525058 CYB5RLQ6IPT4 315 aa13.81□□□□□ -0.2
GIF-202ENST00000525058 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
GIF-202ENST00000525058 ARAP1Q96P48 1450 aa13.77□□□□□ -0.21
GIF-202ENST00000525058 DMRT2Q9Y5R5 561 aa13.74□□□□□ -0.21
GIF-202ENST00000525058 CADPSQ9ULU8 1353 aa13.74□□□□□ -0.21
GIF-202ENST00000525058 CEP164Q9UPV0 1460 aa13.73□□□□□ -0.21
GIF-202ENST00000525058 HOXD11P31277 338 aaPredicted RBP13.71□□□□□ -0.22
GIF-202ENST00000525058 RSF1Q96T23 1441 aaPredicted RBP13.62□□□□□ -0.23
GIF-202ENST00000525058 CHD1O14646 1710 aa13.62□□□□□ -0.23
GIF-202ENST00000525058 FANCD2Q9BXW9 1451 aa13.61□□□□□ -0.23
GIF-202ENST00000525058 SLC4A2P04920 1241 aa13.6□□□□□ -0.23
GIF-202ENST00000525058 URB2Q14146 1524 aaKnown RBP13.56□□□□□ -0.24
GIF-202ENST00000525058 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
GIF-202ENST00000525058 ZNF608Q9ULD9 1512 aaPredicted RBP13.52□□□□□ -0.25
GIF-202ENST00000525058 ATXN8OSP0DMR3 200 aa13.5□□□□□ -0.25
GIF-202ENST00000525058 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
GIF-202ENST00000525058 IFT140Q96RY7 1462 aa13.49□□□□□ -0.25
GIF-202ENST00000525058 AMER1Q5JTC6 1135 aaPredicted RBP13.46□□□□□ -0.25
GIF-202ENST00000525058 RTN4Q9NQC3 1192 aaKnown RBP13.42□□□□□ -0.26
GIF-202ENST00000525058 CFTRP13569 1480 aa13.42□□□□□ -0.26
GIF-202ENST00000525058 PRDM2Q13029 1718 aa13.41□□□□□ -0.26
GIF-202ENST00000525058 MROH2BQ7Z745 1585 aa13.41□□□□□ -0.26
GIF-202ENST00000525058 CLASP1Q7Z460 1538 aa13.39□□□□□ -0.27
GIF-202ENST00000525058 FKBP8Q14318 412 aa13.39□□□□□ -0.27
GIF-202ENST00000525058 KIF13AQ9H1H9 1805 aa13.35□□□□□ -0.27
GIF-202ENST00000525058 ERCC6L2Q5T890 1561 aa13.34□□□□□ -0.27
GIF-202ENST00000525058 SLC24A1O60721 1099 aa13.34□□□□□ -0.27
GIF-202ENST00000525058 KDM4FA0A1W2PPD8 638 aa13.31□□□□□ -0.28
GIF-202ENST00000525058 SYNJ1O43426 1573 aa13.29□□□□□ -0.28
GIF-202ENST00000525058 FBLN2P98095 1184 aa13.28□□□□□ -0.28
GIF-202ENST00000525058 GAPVD1Q14C86 1478 aa13.27□□□□□ -0.29
GIF-202ENST00000525058 TARBP1Q13395 1621 aaKnown RBP13.26□□□□□ -0.29
GIF-202ENST00000525058 TOPBP1Q92547 1522 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms