RNA–Protein interactions for RNA: ENST00000524282.1

KHDRBS3-212, Transcript of KH RNA binding domain containing, signal transduction associated 3, humanhuman

TSL 5

Gene KHDRBS3, Length 585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS3-212ENST00000524282 AEBP2Q6ZN18 517 aaPredicted RBP21.42■■□□□ 1.02
KHDRBS3-212ENST00000524282 CHIC1Q5VXU3 224 aa20.56■□□□□ 0.88
KHDRBS3-212ENST00000524282 SENP3Q9H4L4 574 aaPredicted RBP18.26■□□□□ 0.51
KHDRBS3-212ENST00000524282 NISCHQ9Y2I1 1504 aa18.04■□□□□ 0.48
KHDRBS3-212ENST00000524282 PHF23Q9BUL5 403 aaPredicted RBP18.04■□□□□ 0.48
KHDRBS3-212ENST00000524282 FOXD1Q16676 465 aa16.98■□□□□ 0.31
KHDRBS3-212ENST00000524282 ABCC9O60706 1549 aa16.58■□□□□ 0.24
KHDRBS3-212ENST00000524282 PLPPR3Q6T4P5 718 aa16.53■□□□□ 0.24
KHDRBS3-212ENST00000524282 CCDC180Q9P1Z9 1646 aa16.08■□□□□ 0.17
KHDRBS3-212ENST00000524282 PPP6R1Q9UPN7 881 aa16.03■□□□□ 0.16
KHDRBS3-212ENST00000524282 ADRA2BP18089 450 aa15.98■□□□□ 0.15
KHDRBS3-212ENST00000524282 PIAS4Q8N2W9 510 aaPredicted RBP15.91■□□□□ 0.14
KHDRBS3-212ENST00000524282 DNAJC5BQ9UF47 199 aa15.86■□□□□ 0.13
KHDRBS3-212ENST00000524282 MSH5O43196 834 aa15.84■□□□□ 0.13
KHDRBS3-212ENST00000524282 DCAF8L2P0C7V8 631 aa15.68■□□□□ 0.1
KHDRBS3-212ENST00000524282 RB1CC1Q8TDY2 1594 aa15.57■□□□□ 0.08
KHDRBS3-212ENST00000524282 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
KHDRBS3-212ENST00000524282 NACADO15069 1562 aa15.41■□□□□ 0.06
KHDRBS3-212ENST00000524282 MYO15BQ96JP2 1530 aa15.09■□□□□ 0.01
KHDRBS3-212ENST00000524282 POTEDQ86YR6 584 aa15.08■□□□□ 0
KHDRBS3-212ENST00000524282 BICRAQ9NZM4 1560 aa15.07■□□□□ 0
KHDRBS3-212ENST00000524282 UNC13AQ9UPW8 1703 aa14.99□□□□□ -0.01
KHDRBS3-212ENST00000524282 CECR2Q9BXF3 1484 aa14.95□□□□□ -0.02
KHDRBS3-212ENST00000524282 ZCCHC6Q5VYS8 1495 aaKnown RBP14.85□□□□□ -0.03
KHDRBS3-212ENST00000524282 SHROOM4Q9ULL8 1493 aa14.84□□□□□ -0.03
KHDRBS3-212ENST00000524282 CC2D2AQ9P2K1 1620 aa14.84□□□□□ -0.03
KHDRBS3-212ENST00000524282 DCAF1Q9Y4B6 1507 aa14.82□□□□□ -0.04
KHDRBS3-212ENST00000524282 SCRIBQ14160 1630 aa14.78□□□□□ -0.04
KHDRBS3-212ENST00000524282 EIF4G1Q04637 1599 aaKnown RBP14.76□□□□□ -0.05
KHDRBS3-212ENST00000524282 DNAJC5Q9H3Z4 198 aa14.73□□□□□ -0.05
KHDRBS3-212ENST00000524282 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
KHDRBS3-212ENST00000524282 MAPK8IP2Q13387 824 aaPredicted RBP14.61□□□□□ -0.07
KHDRBS3-212ENST00000524282 DMRT2Q9Y5R5 561 aa14.51□□□□□ -0.09
KHDRBS3-212ENST00000524282 PPP4R3CPQ6ZMV5 832 aa14.49□□□□□ -0.09
KHDRBS3-212ENST00000524282 ERCC6Q03468 1493 aa14.34□□□□□ -0.11
KHDRBS3-212ENST00000524282 NCAPD3P42695 1498 aa14.31□□□□□ -0.12
KHDRBS3-212ENST00000524282 CUX2O14529 1486 aa14.31□□□□□ -0.12
KHDRBS3-212ENST00000524282 ATAD2BQ9ULI0 1458 aa14.23□□□□□ -0.13
KHDRBS3-212ENST00000524282 CNKSR2Q8WXI2 1034 aa14.19□□□□□ -0.14
KHDRBS3-212ENST00000524282 NESP48681 1621 aa14.15□□□□□ -0.14
KHDRBS3-212ENST00000524282 SMARCA2P51531 1590 aa14.11□□□□□ -0.15
KHDRBS3-212ENST00000524282 BAZ1BQ9UIG0 1483 aaKnown RBP14.07□□□□□ -0.16
KHDRBS3-212ENST00000524282 HOXD11P31277 338 aaPredicted RBP14.07□□□□□ -0.16
KHDRBS3-212ENST00000524282 TRIM41Q8WV44 630 aa14.06□□□□□ -0.16
KHDRBS3-212ENST00000524282 HMGXB3Q12766 1538 aa14.05□□□□□ -0.16
KHDRBS3-212ENST00000524282 SMARCA4P51532 1647 aa14.04□□□□□ -0.16
KHDRBS3-212ENST00000524282 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.17
KHDRBS3-212ENST00000524282 RNF216Q9NWF9 866 aaPredicted RBP14.02□□□□□ -0.17
KHDRBS3-212ENST00000524282 PDS5BQ9NTI5 1447 aa13.99□□□□□ -0.17
KHDRBS3-212ENST00000524282 BAZ1AQ9NRL2 1556 aaPredicted RBP13.99□□□□□ -0.17
KHDRBS3-212ENST00000524282 CADPSQ9ULU8 1353 aa13.93□□□□□ -0.18
KHDRBS3-212ENST00000524282 LAMC3Q9Y6N6 1575 aa13.92□□□□□ -0.18
KHDRBS3-212ENST00000524282 MROH2BQ7Z745 1585 aa13.91□□□□□ -0.18
KHDRBS3-212ENST00000524282 THOC2Q8NI27 1593 aaKnown RBP13.88□□□□□ -0.19
KHDRBS3-212ENST00000524282 PEG3Q9GZU2 1588 aa13.88□□□□□ -0.19
KHDRBS3-212ENST00000524282 DCAF8L1A6NGE4 600 aa13.87□□□□□ -0.19
KHDRBS3-212ENST00000524282 OSCARQ8IYS5 282 aa13.83□□□□□ -0.2
KHDRBS3-212ENST00000524282 MRC2Q9UBG0 1479 aa13.81□□□□□ -0.2
KHDRBS3-212ENST00000524282 NPM3O75607 178 aaKnown RBP13.8□□□□□ -0.2
KHDRBS3-212ENST00000524282 KIF21AQ7Z4S6 1674 aa13.76□□□□□ -0.21
KHDRBS3-212ENST00000524282 CEP164Q9UPV0 1460 aa13.72□□□□□ -0.21
KHDRBS3-212ENST00000524282 KCNA4P22459 653 aa13.71□□□□□ -0.21
KHDRBS3-212ENST00000524282 FANCD2Q9BXW9 1451 aa13.71□□□□□ -0.21
KHDRBS3-212ENST00000524282 WDR62O43379 1518 aa13.7□□□□□ -0.22
KHDRBS3-212ENST00000524282 WIZO95785 1651 aa13.66□□□□□ -0.22
KHDRBS3-212ENST00000524282 CFTRP13569 1480 aa13.64□□□□□ -0.23
KHDRBS3-212ENST00000524282 RSF1Q96T23 1441 aaPredicted RBP13.61□□□□□ -0.23
KHDRBS3-212ENST00000524282 URB2Q14146 1524 aaKnown RBP13.57□□□□□ -0.24
KHDRBS3-212ENST00000524282 CYB5RLQ6IPT4 315 aa13.55□□□□□ -0.24
KHDRBS3-212ENST00000524282 RNF39Q9H2S5 420 aa13.53□□□□□ -0.24
KHDRBS3-212ENST00000524282 TRHP20396 242 aaPredicted RBP13.5□□□□□ -0.25
KHDRBS3-212ENST00000524282 FBLN2P98095 1184 aa13.5□□□□□ -0.25
KHDRBS3-212ENST00000524282 TOP2AP11388 1531 aaKnown RBP13.49□□□□□ -0.25
KHDRBS3-212ENST00000524282 IFT140Q96RY7 1462 aa13.48□□□□□ -0.25
KHDRBS3-212ENST00000524282 ZNF608Q9ULD9 1512 aaPredicted RBP13.47□□□□□ -0.25
KHDRBS3-212ENST00000524282 CCDC88BA6NC98 1476 aa13.45□□□□□ -0.26
KHDRBS3-212ENST00000524282 CACNB1Q02641 598 aaPredicted RBP13.43□□□□□ -0.26
KHDRBS3-212ENST00000524282 RIMBP3CA6NJZ7 1639 aa13.4□□□□□ -0.26
KHDRBS3-212ENST00000524282 RIMBP3BA6NNM3 1639 aa13.4□□□□□ -0.26
KHDRBS3-212ENST00000524282 RIMBP3Q9UFD9 1639 aa13.4□□□□□ -0.26
KHDRBS3-212ENST00000524282 AQRO60306 1485 aaKnown RBP eCLIP13.4□□□□□ -0.26
KHDRBS3-212ENST00000524282 ARHGEF11O15085 1522 aa13.39□□□□□ -0.27
KHDRBS3-212ENST00000524282 TOPBP1Q92547 1522 aa13.39□□□□□ -0.27
KHDRBS3-212ENST00000524282 ABCC8Q09428 1581 aa13.38□□□□□ -0.27
KHDRBS3-212ENST00000524282 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.38□□□□□ -0.279e-6■□□□□ 10.7
KHDRBS3-212ENST00000524282 C1QBPQ07021 282 aaKnown RBP13.35□□□□□ -0.27
KHDRBS3-212ENST00000524282 CHMP7Q8WUX9 453 aaPredicted RBP13.33□□□□□ -0.28
KHDRBS3-212ENST00000524282 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
KHDRBS3-212ENST00000524282 SOGA1O94964 1423 aa13.3□□□□□ -0.28
KHDRBS3-212ENST00000524282 RAD54L2Q9Y4B4 1467 aa13.27□□□□□ -0.29
KHDRBS3-212ENST00000524282 DNMBPQ6XZF7 1577 aa13.26□□□□□ -0.29
KHDRBS3-212ENST00000524282 ARAP1Q96P48 1450 aa13.26□□□□□ -0.29
KHDRBS3-212ENST00000524282 EIF4G3O43432 1585 aaKnown RBP13.24□□□□□ -0.29
KHDRBS3-212ENST00000524282 POLA1P09884 1462 aaPredicted RBP13.24□□□□□ -0.29
KHDRBS3-212ENST00000524282 TARBP1Q13395 1621 aaKnown RBP13.19□□□□□ -0.3
KHDRBS3-212ENST00000524282 PRDM2Q13029 1718 aa13.18□□□□□ -0.3
KHDRBS3-212ENST00000524282 SNAPC4Q5SXM2 1469 aa13.17□□□□□ -0.3
KHDRBS3-212ENST00000524282 FGD5Q6ZNL6 1462 aa13.14□□□□□ -0.31
KHDRBS3-212ENST00000524282 CHD1O14646 1710 aa13.13□□□□□ -0.31
KHDRBS3-212ENST00000524282 GRIN2BQ13224 1484 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms