RNA–Protein interactions for RNA: ENST00000522878.5

ARFGEF1-208, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-208ENST00000522878 AEBP2Q6ZN18 517 aaPredicted RBP18.99■□□□□ 0.63
ARFGEF1-208ENST00000522878 CHIC1Q5VXU3 224 aa17.73■□□□□ 0.43
ARFGEF1-208ENST00000522878 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
ARFGEF1-208ENST00000522878 PHF23Q9BUL5 403 aaPredicted RBP15.96■□□□□ 0.15
ARFGEF1-208ENST00000522878 FOXD1Q16676 465 aa15.2■□□□□ 0.02
ARFGEF1-208ENST00000522878 DNAJC5BQ9UF47 199 aa14.83□□□□□ -0.04
ARFGEF1-208ENST00000522878 POTEDQ86YR6 584 aa14.72□□□□□ -0.05
ARFGEF1-208ENST00000522878 DNAJC5Q9H3Z4 198 aa14.52□□□□□ -0.09
ARFGEF1-208ENST00000522878 ABCC9O60706 1549 aa14.5□□□□□ -0.09
ARFGEF1-208ENST00000522878 MSH5O43196 834 aa14.36□□□□□ -0.11
ARFGEF1-208ENST00000522878 PIAS4Q8N2W9 510 aaPredicted RBP14.14□□□□□ -0.15
ARFGEF1-208ENST00000522878 NISCHQ9Y2I1 1504 aa14.11□□□□□ -0.15
ARFGEF1-208ENST00000522878 PLPPR3Q6T4P5 718 aa13.9□□□□□ -0.18
ARFGEF1-208ENST00000522878 PPP6R1Q9UPN7 881 aa13.9□□□□□ -0.18
ARFGEF1-208ENST00000522878 ADRA2BP18089 450 aa13.85□□□□□ -0.19
ARFGEF1-208ENST00000522878 CCDC180Q9P1Z9 1646 aa13.37□□□□□ -0.27
ARFGEF1-208ENST00000522878 RB1CC1Q8TDY2 1594 aa13.25□□□□□ -0.29
ARFGEF1-208ENST00000522878 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
ARFGEF1-208ENST00000522878 TRIM41Q8WV44 630 aa13.22□□□□□ -0.29
ARFGEF1-208ENST00000522878 CECR2Q9BXF3 1484 aa13.19□□□□□ -0.3
ARFGEF1-208ENST00000522878 PABPN1Q86U42 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
ARFGEF1-208ENST00000522878 CC2D2AQ9P2K1 1620 aa13.13□□□□□ -0.31
ARFGEF1-208ENST00000522878 CUX2O14529 1486 aa13.07□□□□□ -0.32
ARFGEF1-208ENST00000522878 BICRAQ9NZM4 1560 aa13.06□□□□□ -0.32
ARFGEF1-208ENST00000522878 NACADO15069 1562 aa12.85□□□□□ -0.35
ARFGEF1-208ENST00000522878 MAPK8IP2Q13387 824 aaPredicted RBP12.83□□□□□ -0.36
ARFGEF1-208ENST00000522878 DMRT2Q9Y5R5 561 aa12.82□□□□□ -0.36
ARFGEF1-208ENST00000522878 EIF4G1Q04637 1599 aaKnown RBP12.76□□□□□ -0.37
ARFGEF1-208ENST00000522878 ILDR1Q86SU0 546 aaPredicted RBP12.66□□□□□ -0.38
ARFGEF1-208ENST00000522878 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
ARFGEF1-208ENST00000522878 SHROOM4Q9ULL8 1493 aa12.61□□□□□ -0.39
ARFGEF1-208ENST00000522878 CACNB1Q02641 598 aaPredicted RBP12.59□□□□□ -0.39
ARFGEF1-208ENST00000522878 ERCC6Q03468 1493 aa12.53□□□□□ -0.4
ARFGEF1-208ENST00000522878 THOC2Q8NI27 1593 aaKnown RBP12.39□□□□□ -0.43
ARFGEF1-208ENST00000522878 DCAF8L1A6NGE4 600 aa12.38□□□□□ -0.43
ARFGEF1-208ENST00000522878 RIMBP3CA6NJZ7 1639 aa12.33□□□□□ -0.44
ARFGEF1-208ENST00000522878 RIMBP3BA6NNM3 1639 aa12.33□□□□□ -0.44
ARFGEF1-208ENST00000522878 RIMBP3Q9UFD9 1639 aa12.33□□□□□ -0.44
ARFGEF1-208ENST00000522878 BAZ1AQ9NRL2 1556 aaPredicted RBP12.26□□□□□ -0.45
ARFGEF1-208ENST00000522878 MYO15BQ96JP2 1530 aa12.25□□□□□ -0.45
ARFGEF1-208ENST00000522878 RNF39Q9H2S5 420 aa12.22□□□□□ -0.45
ARFGEF1-208ENST00000522878 DCAF8L2P0C7V8 631 aa12.17□□□□□ -0.46
ARFGEF1-208ENST00000522878 HOXD11P31277 338 aaPredicted RBP12.17□□□□□ -0.46
ARFGEF1-208ENST00000522878 PPP4R3CPQ6ZMV5 832 aa12.14□□□□□ -0.47
ARFGEF1-208ENST00000522878 NESP48681 1621 aa12.13□□□□□ -0.47
ARFGEF1-208ENST00000522878 TRHP20396 242 aaPredicted RBP12.13□□□□□ -0.47
ARFGEF1-208ENST00000522878 OSCARQ8IYS5 282 aa12.09□□□□□ -0.47
ARFGEF1-208ENST00000522878 ARHGEF11O15085 1522 aa12.09□□□□□ -0.47
ARFGEF1-208ENST00000522878 KIF21AQ7Z4S6 1674 aa12.06□□□□□ -0.48
ARFGEF1-208ENST00000522878 SMARCA2P51531 1590 aa12.04□□□□□ -0.48
ARFGEF1-208ENST00000522878 SCRIBQ14160 1630 aa12.03□□□□□ -0.48
ARFGEF1-208ENST00000522878 C1QBPQ07021 282 aaKnown RBP12□□□□□ -0.49
ARFGEF1-208ENST00000522878 CNKSR2Q8WXI2 1034 aa11.99□□□□□ -0.49
ARFGEF1-208ENST00000522878 RNF216Q9NWF9 866 aaPredicted RBP11.98□□□□□ -0.49
ARFGEF1-208ENST00000522878 CYB5RLQ6IPT4 315 aa11.9□□□□□ -0.5
ARFGEF1-208ENST00000522878 ARAP1Q96P48 1450 aa11.89□□□□□ -0.51
ARFGEF1-208ENST00000522878 LMTK3Q96Q04 1460 aa11.89□□□□□ -0.51
ARFGEF1-208ENST00000522878 SOCS7O14512 581 aa11.86□□□□□ -0.51
ARFGEF1-208ENST00000522878 NCAPD3P42695 1498 aa11.85□□□□□ -0.51
ARFGEF1-208ENST00000522878 LAMC3Q9Y6N6 1575 aa11.84□□□□□ -0.51
ARFGEF1-208ENST00000522878 WDR62O43379 1518 aa11.83□□□□□ -0.52
ARFGEF1-208ENST00000522878 ERCC6L2Q5T890 1561 aa11.78□□□□□ -0.52
ARFGEF1-208ENST00000522878 ILDR2Q71H61 639 aa11.76□□□□□ -0.53
ARFGEF1-208ENST00000522878 FBXO41Q8TF61 875 aa11.74□□□□□ -0.53
ARFGEF1-208ENST00000522878 MRC2Q9UBG0 1479 aa11.74□□□□□ -0.53
ARFGEF1-208ENST00000522878 KDM4FA0A1W2PPD8 638 aa11.7□□□□□ -0.54
ARFGEF1-208ENST00000522878 HMGXB3Q12766 1538 aa11.7□□□□□ -0.54
ARFGEF1-208ENST00000522878 EHMT2Q96KQ7 1210 aa11.69□□□□□ -0.54
ARFGEF1-208ENST00000522878 PDS5BQ9NTI5 1447 aa11.68□□□□□ -0.54
ARFGEF1-208ENST00000522878 HECW2Q9P2P5 1572 aa11.65□□□□□ -0.54
ARFGEF1-208ENST00000522878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.63□□□□□ -0.55
ARFGEF1-208ENST00000522878 ATAD2BQ9ULI0 1458 aa11.63□□□□□ -0.55
ARFGEF1-208ENST00000522878 DCAF1Q9Y4B6 1507 aa11.6□□□□□ -0.55
ARFGEF1-208ENST00000522878 CHD1O14646 1710 aa11.57□□□□□ -0.56
ARFGEF1-208ENST00000522878 RSF1Q96T23 1441 aaPredicted RBP11.56□□□□□ -0.56
ARFGEF1-208ENST00000522878 KIF13AQ9H1H9 1805 aa11.56□□□□□ -0.56
ARFGEF1-208ENST00000522878 NCBP3Q53F19 620 aaKnown RBP11.53□□□□□ -0.56
ARFGEF1-208ENST00000522878 SMARCA4P51532 1647 aa11.49□□□□□ -0.57
ARFGEF1-208ENST00000522878 DISP3Q9P2K9 1392 aa11.48□□□□□ -0.57
ARFGEF1-208ENST00000522878 POTEHQ6S545 545 aa11.45□□□□□ -0.58
ARFGEF1-208ENST00000522878 ZCCHC6Q5VYS8 1495 aaKnown RBP11.44□□□□□ -0.58
ARFGEF1-208ENST00000522878 KCNA4P22459 653 aa11.42□□□□□ -0.58
ARFGEF1-208ENST00000522878 CEP164Q9UPV0 1460 aa11.4□□□□□ -0.58
ARFGEF1-208ENST00000522878 NPM3O75607 178 aaKnown RBP11.4□□□□□ -0.58
ARFGEF1-208ENST00000522878 ZNF608Q9ULD9 1512 aaPredicted RBP11.4□□□□□ -0.59
ARFGEF1-208ENST00000522878 SYNJ2O15056 1496 aa11.39□□□□□ -0.59
ARFGEF1-208ENST00000522878 BAZ1BQ9UIG0 1483 aaKnown RBP11.39□□□□□ -0.59
ARFGEF1-208ENST00000522878 SPATA31D1Q6ZQQ2 1576 aa11.38□□□□□ -0.59
ARFGEF1-208ENST00000522878 U3KPZ7 1027 aaPredicted RBP11.36□□□□□ -0.59
ARFGEF1-208ENST00000522878 CADPSQ9ULU8 1353 aa11.36□□□□□ -0.59
ARFGEF1-208ENST00000522878 URB2Q14146 1524 aaKnown RBP11.34□□□□□ -0.59
ARFGEF1-208ENST00000522878 CLASP1Q7Z460 1538 aa11.34□□□□□ -0.59
ARFGEF1-208ENST00000522878 EIF4G3O43432 1585 aaKnown RBP11.33□□□□□ -0.6
ARFGEF1-208ENST00000522878 CAPN15O75808 1086 aa11.32□□□□□ -0.6
ARFGEF1-208ENST00000522878 DSG3P32926 999 aa11.32□□□□□ -0.6
ARFGEF1-208ENST00000522878 SPINK5Q9NQ38 1064 aaPredicted RBP11.32□□□□□ -0.6
ARFGEF1-208ENST00000522878 ADGRL1O94910 1474 aa11.32□□□□□ -0.6
ARFGEF1-208ENST00000522878 PEG3Q9GZU2 1588 aa11.28□□□□□ -0.6
ARFGEF1-208ENST00000522878 KDM6BO15054 1643 aa11.27□□□□□ -0.6
ARFGEF1-208ENST00000522878 FANCD2Q9BXW9 1451 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms