RNA–Protein interactions for RNA: ENST00000522067.1

PCNX2-223, Transcript of pecanex 2, humanhuman

TSL 3

Gene PCNX2, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-223ENST00000522067 AEBP2Q6ZN18 517 aaPredicted RBP23.85■■□□□ 1.41
PCNX2-223ENST00000522067 CHIC1Q5VXU3 224 aa22.95■■□□□ 1.26
PCNX2-223ENST00000522067 NISCHQ9Y2I1 1504 aa20.59■□□□□ 0.89
PCNX2-223ENST00000522067 SENP3Q9H4L4 574 aaPredicted RBP20.36■□□□□ 0.85
PCNX2-223ENST00000522067 PHF23Q9BUL5 403 aaPredicted RBP20.13■□□□□ 0.81
PCNX2-223ENST00000522067 FOXD1Q16676 465 aa18.91■□□□□ 0.62
PCNX2-223ENST00000522067 ABCC9O60706 1549 aa18.64■□□□□ 0.57
PCNX2-223ENST00000522067 PLPPR3Q6T4P5 718 aa18.51■□□□□ 0.55
PCNX2-223ENST00000522067 CCDC180Q9P1Z9 1646 aa18.31■□□□□ 0.52
PCNX2-223ENST00000522067 ADRA2BP18089 450 aa17.89■□□□□ 0.45
PCNX2-223ENST00000522067 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.45
PCNX2-223ENST00000522067 DNAJC5BQ9UF47 199 aa17.8■□□□□ 0.44
PCNX2-223ENST00000522067 PIAS4Q8N2W9 510 aaPredicted RBP17.79■□□□□ 0.44
PCNX2-223ENST00000522067 MSH5O43196 834 aa17.63■□□□□ 0.41
PCNX2-223ENST00000522067 RB1CC1Q8TDY2 1594 aa17.56■□□□□ 0.4
PCNX2-223ENST00000522067 DCAF8L2P0C7V8 631 aa17.38■□□□□ 0.37
PCNX2-223ENST00000522067 PABPN1Q86U42 306 aaKnown RBP eCLIP17.35■□□□□ 0.37
PCNX2-223ENST00000522067 NACADO15069 1562 aa17.34■□□□□ 0.37
PCNX2-223ENST00000522067 ZCCHC6Q5VYS8 1495 aaKnown RBP17.2■□□□□ 0.34
PCNX2-223ENST00000522067 UNC13AQ9UPW8 1703 aa17.18■□□□□ 0.34
PCNX2-223ENST00000522067 MYO15BQ96JP2 1530 aa17.12■□□□□ 0.33
PCNX2-223ENST00000522067 DCAF1Q9Y4B6 1507 aa17.09■□□□□ 0.33
PCNX2-223ENST00000522067 BICRAQ9NZM4 1560 aa17.04■□□□□ 0.32
PCNX2-223ENST00000522067 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
PCNX2-223ENST00000522067 CC2D2AQ9P2K1 1620 aa16.8■□□□□ 0.28
PCNX2-223ENST00000522067 SHROOM4Q9ULL8 1493 aa16.72■□□□□ 0.27
PCNX2-223ENST00000522067 POTEDQ86YR6 584 aa16.68■□□□□ 0.26
PCNX2-223ENST00000522067 EIF4G1Q04637 1599 aaKnown RBP16.66■□□□□ 0.26
PCNX2-223ENST00000522067 SCRIBQ14160 1630 aa16.65■□□□□ 0.26
PCNX2-223ENST00000522067 DNAJC5Q9H3Z4 198 aa16.59■□□□□ 0.25
PCNX2-223ENST00000522067 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
PCNX2-223ENST00000522067 MAPK8IP2Q13387 824 aaPredicted RBP16.34■□□□□ 0.21
PCNX2-223ENST00000522067 PPP4R3CPQ6ZMV5 832 aa16.26■□□□□ 0.19
PCNX2-223ENST00000522067 DMRT2Q9Y5R5 561 aa16.16■□□□□ 0.18
PCNX2-223ENST00000522067 CUX2O14529 1486 aa16.15■□□□□ 0.18
PCNX2-223ENST00000522067 ERCC6Q03468 1493 aa16.12■□□□□ 0.17
PCNX2-223ENST00000522067 NCAPD3P42695 1498 aa16.02■□□□□ 0.15
PCNX2-223ENST00000522067 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
PCNX2-223ENST00000522067 BAZ1AQ9NRL2 1556 aaPredicted RBP15.96■□□□□ 0.14
PCNX2-223ENST00000522067 ATAD2BQ9ULI0 1458 aa15.92■□□□□ 0.14
PCNX2-223ENST00000522067 NESP48681 1621 aa15.9■□□□□ 0.14
PCNX2-223ENST00000522067 CNKSR2Q8WXI2 1034 aa15.88■□□□□ 0.13
PCNX2-223ENST00000522067 SMARCA2P51531 1590 aa15.87■□□□□ 0.13
PCNX2-223ENST00000522067 MROH2BQ7Z745 1585 aa15.87■□□□□ 0.13
PCNX2-223ENST00000522067 PEG3Q9GZU2 1588 aa15.84■□□□□ 0.13
PCNX2-223ENST00000522067 HMGXB3Q12766 1538 aa15.84■□□□□ 0.13
PCNX2-223ENST00000522067 TRIM41Q8WV44 630 aa15.8■□□□□ 0.12
PCNX2-223ENST00000522067 BAZ1BQ9UIG0 1483 aaKnown RBP15.78■□□□□ 0.12
PCNX2-223ENST00000522067 NCBP3Q53F19 620 aaKnown RBP15.77■□□□□ 0.12
PCNX2-223ENST00000522067 THOC2Q8NI27 1593 aaKnown RBP15.75■□□□□ 0.11
PCNX2-223ENST00000522067 LAMC3Q9Y6N6 1575 aa15.71■□□□□ 0.11
PCNX2-223ENST00000522067 RSF1Q96T23 1441 aaPredicted RBP15.71■□□□□ 0.11
PCNX2-223ENST00000522067 WIZO95785 1651 aa15.7■□□□□ 0.1
PCNX2-223ENST00000522067 KIF21AQ7Z4S6 1674 aa15.7■□□□□ 0.1
PCNX2-223ENST00000522067 PDS5BQ9NTI5 1447 aa15.67■□□□□ 0.1
PCNX2-223ENST00000522067 HOXD11P31277 338 aaPredicted RBP15.66■□□□□ 0.1
PCNX2-223ENST00000522067 RNF216Q9NWF9 866 aaPredicted RBP15.65■□□□□ 0.1
PCNX2-223ENST00000522067 DCAF8L1A6NGE4 600 aa15.61■□□□□ 0.09
PCNX2-223ENST00000522067 TOP2AP11388 1531 aaKnown RBP15.55■□□□□ 0.08
PCNX2-223ENST00000522067 CADPSQ9ULU8 1353 aa15.54■□□□□ 0.08
PCNX2-223ENST00000522067 MRC2Q9UBG0 1479 aa15.52■□□□□ 0.08
PCNX2-223ENST00000522067 NPM3O75607 178 aaKnown RBP15.47■□□□□ 0.07
PCNX2-223ENST00000522067 WDR62O43379 1518 aa15.47■□□□□ 0.07
PCNX2-223ENST00000522067 OSCARQ8IYS5 282 aa15.46■□□□□ 0.07
PCNX2-223ENST00000522067 KCNA4P22459 653 aa15.44■□□□□ 0.06
PCNX2-223ENST00000522067 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
PCNX2-223ENST00000522067 FANCD2Q9BXW9 1451 aa15.36■□□□□ 0.05
PCNX2-223ENST00000522067 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
PCNX2-223ENST00000522067 CFTRP13569 1480 aa15.3■□□□□ 0.04
PCNX2-223ENST00000522067 SUPT5HO00267 1087 aaKnown RBP15.29■□□□□ 0.04
PCNX2-223ENST00000522067 URB2Q14146 1524 aaKnown RBP15.24■□□□□ 0.03
PCNX2-223ENST00000522067 PRDM2Q13029 1718 aa15.23■□□□□ 0.03
PCNX2-223ENST00000522067 RIMBP3CA6NJZ7 1639 aa15.23■□□□□ 0.03
PCNX2-223ENST00000522067 RIMBP3BA6NNM3 1639 aa15.23■□□□□ 0.03
PCNX2-223ENST00000522067 RIMBP3Q9UFD9 1639 aa15.23■□□□□ 0.03
PCNX2-223ENST00000522067 CYB5RLQ6IPT4 315 aa15.14■□□□□ 0.01
PCNX2-223ENST00000522067 ARHGEF11O15085 1522 aa15.12■□□□□ 0.01
PCNX2-223ENST00000522067 ZNF608Q9ULD9 1512 aaPredicted RBP15.12■□□□□ 0.01
PCNX2-223ENST00000522067 TRHP20396 242 aaPredicted RBP15.12■□□□□ 0.01
PCNX2-223ENST00000522067 IFT140Q96RY7 1462 aa15.1■□□□□ 0.01
PCNX2-223ENST00000522067 FBLN2P98095 1184 aa15.03■□□□□ -0
PCNX2-223ENST00000522067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.03■□□□□ -0
PCNX2-223ENST00000522067 RNF39Q9H2S5 420 aa15.03■□□□□ -0
PCNX2-223ENST00000522067 TOPBP1Q92547 1522 aa15.02■□□□□ -0
PCNX2-223ENST00000522067 EIF4G3O43432 1585 aaKnown RBP14.99□□□□□ -0.01
PCNX2-223ENST00000522067 CACNB1Q02641 598 aaPredicted RBP14.99□□□□□ -0.01
PCNX2-223ENST00000522067 CHD1O14646 1710 aa14.99□□□□□ -0.01
PCNX2-223ENST00000522067 ABCC8Q09428 1581 aa14.98□□□□□ -0.01
PCNX2-223ENST00000522067 AQRO60306 1485 aaKnown RBP eCLIP14.98□□□□□ -0.01
PCNX2-223ENST00000522067 DNMBPQ6XZF7 1577 aa14.95□□□□□ -0.02
PCNX2-223ENST00000522067 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
PCNX2-223ENST00000522067 TARBP1Q13395 1621 aaKnown RBP14.91□□□□□ -0.02
PCNX2-223ENST00000522067 CUX1P39880 1505 aa14.88□□□□□ -0.03
PCNX2-223ENST00000522067 C1QBPQ07021 282 aaKnown RBP14.86□□□□□ -0.03
PCNX2-223ENST00000522067 TDRD9Q8NDG6 1382 aaKnown RBP14.85□□□□□ -0.03
PCNX2-223ENST00000522067 POLA1P09884 1462 aaPredicted RBP14.84□□□□□ -0.03
PCNX2-223ENST00000522067 CHMP7Q8WUX9 453 aaPredicted RBP14.84□□□□□ -0.03
PCNX2-223ENST00000522067 RAD54L2Q9Y4B4 1467 aa14.83□□□□□ -0.03
PCNX2-223ENST00000522067 SOGA1O94964 1423 aa14.83□□□□□ -0.04
PCNX2-223ENST00000522067 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms