RNA–Protein interactions for RNA: ENST00000521938.5

ELP3-213, Transcript of elongator acetyltransferase complex subunit 3, humanhuman

TSL 2

Gene ELP3, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELP3-213ENST00000521938 AEBP2Q6ZN18 517 aaPredicted RBP29.38■■■□□ 2.29
ELP3-213ENST00000521938 CHIC1Q5VXU3 224 aa27.75■■■□□ 2.03
ELP3-213ENST00000521938 SENP3Q9H4L4 574 aaPredicted RBP25.14■■□□□ 1.62
ELP3-213ENST00000521938 PHF23Q9BUL5 403 aaPredicted RBP24.78■■□□□ 1.56
ELP3-213ENST00000521938 FOXD1Q16676 465 aa23.43■■□□□ 1.34
ELP3-213ENST00000521938 NISCHQ9Y2I1 1504 aa23.32■■□□□ 1.32
ELP3-213ENST00000521938 PLPPR3Q6T4P5 718 aa22.1■■□□□ 1.13
ELP3-213ENST00000521938 MSH5O43196 834 aa22.04■■□□□ 1.12
ELP3-213ENST00000521938 PIAS4Q8N2W9 510 aaPredicted RBP21.86■■□□□ 1.09
ELP3-213ENST00000521938 POTEDQ86YR6 584 aa21.8■■□□□ 1.08
ELP3-213ENST00000521938 PPP6R1Q9UPN7 881 aa21.74■■□□□ 1.07
ELP3-213ENST00000521938 ADRA2BP18089 450 aa21.67■■□□□ 1.06
ELP3-213ENST00000521938 ABCC9O60706 1549 aa21.17■□□□□ 0.98
ELP3-213ENST00000521938 CCDC180Q9P1Z9 1646 aa21.06■□□□□ 0.96
ELP3-213ENST00000521938 RB1CC1Q8TDY2 1594 aa20.08■□□□□ 0.81
ELP3-213ENST00000521938 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
ELP3-213ENST00000521938 MAPK8IP2Q13387 824 aaPredicted RBP19.96■□□□□ 0.79
ELP3-213ENST00000521938 NACADO15069 1562 aa19.89■□□□□ 0.77
ELP3-213ENST00000521938 SCAF1Q9H7N4 1312 aaKnown RBP19.89■□□□□ 0.77
ELP3-213ENST00000521938 DMRT2Q9Y5R5 561 aa19.89■□□□□ 0.77
ELP3-213ENST00000521938 UNC13AQ9UPW8 1703 aa19.76■□□□□ 0.75
ELP3-213ENST00000521938 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
ELP3-213ENST00000521938 PABPN1Q86U42 306 aaKnown RBP eCLIP19.63■□□□□ 0.73
ELP3-213ENST00000521938 BICRAQ9NZM4 1560 aa19.57■□□□□ 0.72
ELP3-213ENST00000521938 MYO15BQ96JP2 1530 aa19.56■□□□□ 0.72
ELP3-213ENST00000521938 PPP4R3CPQ6ZMV5 832 aa19.34■□□□□ 0.69
ELP3-213ENST00000521938 ZCCHC6Q5VYS8 1495 aaKnown RBP19.31■□□□□ 0.68
ELP3-213ENST00000521938 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
ELP3-213ENST00000521938 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
ELP3-213ENST00000521938 SCRIBQ14160 1630 aa19.16■□□□□ 0.66
ELP3-213ENST00000521938 CC2D2AQ9P2K1 1620 aa19.15■□□□□ 0.66
ELP3-213ENST00000521938 DCAF8L1A6NGE4 600 aa19.11■□□□□ 0.65
ELP3-213ENST00000521938 HOXD11P31277 338 aaPredicted RBP19.09■□□□□ 0.65
ELP3-213ENST00000521938 CECR2Q9BXF3 1484 aa19.08■□□□□ 0.64
ELP3-213ENST00000521938 EIF4G1Q04637 1599 aaKnown RBP19.06■□□□□ 0.64
ELP3-213ENST00000521938 CACNB1Q02641 598 aaPredicted RBP19.04■□□□□ 0.64
ELP3-213ENST00000521938 CNKSR2Q8WXI2 1034 aa19.03■□□□□ 0.64
ELP3-213ENST00000521938 RNF216Q9NWF9 866 aaPredicted RBP18.91■□□□□ 0.62
ELP3-213ENST00000521938 RNF39Q9H2S5 420 aa18.76■□□□□ 0.59
ELP3-213ENST00000521938 NCBP3Q53F19 620 aaKnown RBP18.57■□□□□ 0.56
ELP3-213ENST00000521938 C1QBPQ07021 282 aaKnown RBP18.5■□□□□ 0.55
ELP3-213ENST00000521938 DNAJC5Q9H3Z4 198 aa18.45■□□□□ 0.54
ELP3-213ENST00000521938 NCAPD3P42695 1498 aa18.35■□□□□ 0.53
ELP3-213ENST00000521938 CUX2O14529 1486 aa18.31■□□□□ 0.52
ELP3-213ENST00000521938 ATAD2BQ9ULI0 1458 aa18.28■□□□□ 0.52
ELP3-213ENST00000521938 SMARCA4P51532 1647 aa18.27■□□□□ 0.51
ELP3-213ENST00000521938 ERCC6Q03468 1493 aa18.26■□□□□ 0.51
ELP3-213ENST00000521938 NPM3O75607 178 aaKnown RBP18.25■□□□□ 0.51
ELP3-213ENST00000521938 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
ELP3-213ENST00000521938 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
ELP3-213ENST00000521938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.2■□□□□ 0.5
ELP3-213ENST00000521938 NESP48681 1621 aa18.16■□□□□ 0.5
ELP3-213ENST00000521938 BAZ1AQ9NRL2 1556 aaPredicted RBP18.1■□□□□ 0.49
ELP3-213ENST00000521938 PEG3Q9GZU2 1588 aa18.08■□□□□ 0.49
ELP3-213ENST00000521938 BAZ1BQ9UIG0 1483 aaKnown RBP18.08■□□□□ 0.49
ELP3-213ENST00000521938 THOC2Q8NI27 1593 aaKnown RBP18.06■□□□□ 0.48
ELP3-213ENST00000521938 LAMC3Q9Y6N6 1575 aa18■□□□□ 0.47
ELP3-213ENST00000521938 KIF21AQ7Z4S6 1674 aa17.99■□□□□ 0.47
ELP3-213ENST00000521938 MROH2BQ7Z745 1585 aa17.98■□□□□ 0.47
ELP3-213ENST00000521938 PDS5BQ9NTI5 1447 aa17.83■□□□□ 0.45
ELP3-213ENST00000521938 WIZO95785 1651 aa17.78■□□□□ 0.44
ELP3-213ENST00000521938 U3KPZ7 1027 aaPredicted RBP17.76■□□□□ 0.43
ELP3-213ENST00000521938 CADPSQ9ULU8 1353 aa17.76■□□□□ 0.43
ELP3-213ENST00000521938 WDR62O43379 1518 aa17.73■□□□□ 0.43
ELP3-213ENST00000521938 MRC2Q9UBG0 1479 aa17.73■□□□□ 0.43
ELP3-213ENST00000521938 KCNA4P22459 653 aa17.72■□□□□ 0.43
ELP3-213ENST00000521938 CEP164Q9UPV0 1460 aa17.63■□□□□ 0.41
ELP3-213ENST00000521938 FANCD2Q9BXW9 1451 aa17.58■□□□□ 0.41
ELP3-213ENST00000521938 CAPN15O75808 1086 aa17.58■□□□□ 0.4
ELP3-213ENST00000521938 SPINK5Q9NQ38 1064 aaPredicted RBP17.57■□□□□ 0.4
ELP3-213ENST00000521938 TRIM41Q8WV44 630 aa17.56■□□□□ 0.4
ELP3-213ENST00000521938 CFTRP13569 1480 aa17.56■□□□□ 0.4
ELP3-213ENST00000521938 TOP2AP11388 1531 aaKnown RBP17.52■□□□□ 0.39
ELP3-213ENST00000521938 RSF1Q96T23 1441 aaPredicted RBP17.51■□□□□ 0.39
ELP3-213ENST00000521938 DSG3P32926 999 aa17.5■□□□□ 0.39
ELP3-213ENST00000521938 URB2Q14146 1524 aaKnown RBP17.48■□□□□ 0.39
ELP3-213ENST00000521938 PRDM2Q13029 1718 aa17.48■□□□□ 0.39
ELP3-213ENST00000521938 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
ELP3-213ENST00000521938 OSCARQ8IYS5 282 aa17.36■□□□□ 0.37
ELP3-213ENST00000521938 APLP2Q06481 763 aa17.32■□□□□ 0.36
ELP3-213ENST00000521938 RIMBP3CA6NJZ7 1639 aa17.3■□□□□ 0.36
ELP3-213ENST00000521938 RIMBP3BA6NNM3 1639 aa17.3■□□□□ 0.36
ELP3-213ENST00000521938 RIMBP3Q9UFD9 1639 aa17.3■□□□□ 0.36
ELP3-213ENST00000521938 ZNF608Q9ULD9 1512 aaPredicted RBP17.3■□□□□ 0.36
ELP3-213ENST00000521938 CCDC88BA6NC98 1476 aa17.3■□□□□ 0.36
ELP3-213ENST00000521938 IFT140Q96RY7 1462 aa17.27■□□□□ 0.36
ELP3-213ENST00000521938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
ELP3-213ENST00000521938 TRHP20396 242 aaPredicted RBP17.25■□□□□ 0.35
ELP3-213ENST00000521938 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
ELP3-213ENST00000521938 TOPBP1Q92547 1522 aa17.25■□□□□ 0.35
ELP3-213ENST00000521938 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
ELP3-213ENST00000521938 ZNF219Q9P2Y4 722 aaPredicted RBP17.23■□□□□ 0.35
ELP3-213ENST00000521938 ARHGEF11O15085 1522 aa17.19■□□□□ 0.34
ELP3-213ENST00000521938 DNMBPQ6XZF7 1577 aa17.19■□□□□ 0.34
ELP3-213ENST00000521938 CHD1O14646 1710 aa17.16■□□□□ 0.34
ELP3-213ENST00000521938 TARBP1Q13395 1621 aaKnown RBP17.16■□□□□ 0.34
ELP3-213ENST00000521938 ABCC8Q09428 1581 aa17.15■□□□□ 0.34
ELP3-213ENST00000521938 ABCB7O75027 752 aa17.13■□□□□ 0.33
ELP3-213ENST00000521938 SAMD1Q6SPF0 538 aaPredicted RBP17.13■□□□□ 0.33
ELP3-213ENST00000521938 AQRO60306 1485 aaKnown RBP eCLIP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms