RNA–Protein interactions for RNA: ENST00000520959.5

LPL-203, Transcript of lipoprotein lipase, humanhuman

TSL 4

Gene LPL, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPL-203ENST00000520959 AEBP2Q6ZN18 517 aaPredicted RBP24.62■■□□□ 1.53
LPL-203ENST00000520959 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
LPL-203ENST00000520959 NISCHQ9Y2I1 1504 aa21.09■□□□□ 0.97
LPL-203ENST00000520959 SENP3Q9H4L4 574 aaPredicted RBP20.97■□□□□ 0.95
LPL-203ENST00000520959 PHF23Q9BUL5 403 aaPredicted RBP20.69■□□□□ 0.9
LPL-203ENST00000520959 FOXD1Q16676 465 aa19.62■□□□□ 0.73
LPL-203ENST00000520959 CCDC180Q9P1Z9 1646 aa18.99■□□□□ 0.63
LPL-203ENST00000520959 ABCC9O60706 1549 aa18.77■□□□□ 0.6
LPL-203ENST00000520959 POTEDQ86YR6 584 aa18.41■□□□□ 0.54
LPL-203ENST00000520959 MSH5O43196 834 aa18.4■□□□□ 0.54
LPL-203ENST00000520959 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
LPL-203ENST00000520959 PIAS4Q8N2W9 510 aaPredicted RBP18.22■□□□□ 0.51
LPL-203ENST00000520959 PPP6R1Q9UPN7 881 aa18.18■□□□□ 0.5
LPL-203ENST00000520959 ADRA2BP18089 450 aa18.08■□□□□ 0.48
LPL-203ENST00000520959 RB1CC1Q8TDY2 1594 aa18.01■□□□□ 0.47
LPL-203ENST00000520959 NACADO15069 1562 aa17.91■□□□□ 0.46
LPL-203ENST00000520959 MYO15BQ96JP2 1530 aa17.75■□□□□ 0.43
LPL-203ENST00000520959 DCAF8L2P0C7V8 631 aa17.63■□□□□ 0.41
LPL-203ENST00000520959 UNC13AQ9UPW8 1703 aa17.52■□□□□ 0.4
LPL-203ENST00000520959 DCAF1Q9Y4B6 1507 aa17.52■□□□□ 0.4
LPL-203ENST00000520959 ZCCHC6Q5VYS8 1495 aaKnown RBP17.51■□□□□ 0.39
LPL-203ENST00000520959 DNAJC5BQ9UF47 199 aa17.48■□□□□ 0.39
LPL-203ENST00000520959 BICRAQ9NZM4 1560 aa17.42■□□□□ 0.38
LPL-203ENST00000520959 PABPN1Q86U42 306 aaKnown RBP eCLIP17.42■□□□□ 0.38
LPL-203ENST00000520959 SHROOM4Q9ULL8 1493 aa17.37■□□□□ 0.37
LPL-203ENST00000520959 SCRIBQ14160 1630 aa17.18■□□□□ 0.34
LPL-203ENST00000520959 EIF4G1Q04637 1599 aaKnown RBP17.01■□□□□ 0.31
LPL-203ENST00000520959 CC2D2AQ9P2K1 1620 aa17■□□□□ 0.31
LPL-203ENST00000520959 CECR2Q9BXF3 1484 aa16.95■□□□□ 0.3
LPL-203ENST00000520959 MAPK8IP2Q13387 824 aaPredicted RBP16.69■□□□□ 0.26
LPL-203ENST00000520959 DMRT2Q9Y5R5 561 aa16.62■□□□□ 0.25
LPL-203ENST00000520959 NCAPD3P42695 1498 aa16.52■□□□□ 0.23
LPL-203ENST00000520959 SCAF1Q9H7N4 1312 aaKnown RBP16.48■□□□□ 0.23
LPL-203ENST00000520959 SMARCA2P51531 1590 aa16.46■□□□□ 0.23
LPL-203ENST00000520959 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
LPL-203ENST00000520959 ATAD2BQ9ULI0 1458 aa16.43■□□□□ 0.22
LPL-203ENST00000520959 HMGXB3Q12766 1538 aa16.43■□□□□ 0.22
LPL-203ENST00000520959 BAZ1AQ9NRL2 1556 aaPredicted RBP16.41■□□□□ 0.22
LPL-203ENST00000520959 PEG3Q9GZU2 1588 aa16.35■□□□□ 0.21
LPL-203ENST00000520959 BAZ1BQ9UIG0 1483 aaKnown RBP16.29■□□□□ 0.2
LPL-203ENST00000520959 CUX2O14529 1486 aa16.28■□□□□ 0.2
LPL-203ENST00000520959 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
LPL-203ENST00000520959 MROH2BQ7Z745 1585 aa16.2■□□□□ 0.18
LPL-203ENST00000520959 LAMC3Q9Y6N6 1575 aa16.15■□□□□ 0.18
LPL-203ENST00000520959 NESP48681 1621 aa16.12■□□□□ 0.17
LPL-203ENST00000520959 DNAJC5Q9H3Z4 198 aa16.11■□□□□ 0.17
LPL-203ENST00000520959 PDS5BQ9NTI5 1447 aa16.04■□□□□ 0.16
LPL-203ENST00000520959 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
LPL-203ENST00000520959 THOC2Q8NI27 1593 aaKnown RBP16.04■□□□□ 0.16
LPL-203ENST00000520959 WIZO95785 1651 aa16■□□□□ 0.15
LPL-203ENST00000520959 CADPSQ9ULU8 1353 aa15.99■□□□□ 0.15
LPL-203ENST00000520959 KIF21AQ7Z4S6 1674 aa15.97■□□□□ 0.15
LPL-203ENST00000520959 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
LPL-203ENST00000520959 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
LPL-203ENST00000520959 RSF1Q96T23 1441 aaPredicted RBP15.91■□□□□ 0.14
LPL-203ENST00000520959 TOP2AP11388 1531 aaKnown RBP15.89■□□□□ 0.13
LPL-203ENST00000520959 MRC2Q9UBG0 1479 aa15.88■□□□□ 0.13
LPL-203ENST00000520959 DCAF8L1A6NGE4 600 aa15.87■□□□□ 0.13
LPL-203ENST00000520959 WDR62O43379 1518 aa15.86■□□□□ 0.13
LPL-203ENST00000520959 CFTRP13569 1480 aa15.84■□□□□ 0.13
LPL-203ENST00000520959 CEP164Q9UPV0 1460 aa15.83■□□□□ 0.12
LPL-203ENST00000520959 FANCD2Q9BXW9 1451 aa15.79■□□□□ 0.12
LPL-203ENST00000520959 CNKSR2Q8WXI2 1034 aa15.79■□□□□ 0.12
LPL-203ENST00000520959 RNF39Q9H2S5 420 aa15.73■□□□□ 0.11
LPL-203ENST00000520959 RNF216Q9NWF9 866 aaPredicted RBP15.72■□□□□ 0.11
LPL-203ENST00000520959 PRDM2Q13029 1718 aa15.71■□□□□ 0.11
LPL-203ENST00000520959 CCDC88BA6NC98 1476 aa15.65■□□□□ 0.1
LPL-203ENST00000520959 URB2Q14146 1524 aaKnown RBP15.64■□□□□ 0.09
LPL-203ENST00000520959 ABCC8Q09428 1581 aa15.56■□□□□ 0.08
LPL-203ENST00000520959 IFT140Q96RY7 1462 aa15.52■□□□□ 0.08
LPL-203ENST00000520959 TOPBP1Q92547 1522 aa15.5■□□□□ 0.07
LPL-203ENST00000520959 DNMBPQ6XZF7 1577 aa15.49■□□□□ 0.07
LPL-203ENST00000520959 OSCARQ8IYS5 282 aa15.47■□□□□ 0.07
LPL-203ENST00000520959 C1QBPQ07021 282 aaKnown RBP15.45■□□□□ 0.06
LPL-203ENST00000520959 ZNF608Q9ULD9 1512 aaPredicted RBP15.41■□□□□ 0.06
LPL-203ENST00000520959 EIF4G3O43432 1585 aaKnown RBP15.39■□□□□ 0.05
LPL-203ENST00000520959 TARBP1Q13395 1621 aaKnown RBP15.37■□□□□ 0.05
LPL-203ENST00000520959 POLA1P09884 1462 aaPredicted RBP15.35■□□□□ 0.05
LPL-203ENST00000520959 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
LPL-203ENST00000520959 WDR97A6NE52 1622 aa15.34■□□□□ 0.05
LPL-203ENST00000520959 NCBP3Q53F19 620 aaKnown RBP15.31■□□□□ 0.04
LPL-203ENST00000520959 AQRO60306 1485 aaKnown RBP eCLIP15.27■□□□□ 0.04
LPL-203ENST00000520959 SOGA1O94964 1423 aa15.26■□□□□ 0.03
LPL-203ENST00000520959 RIMBP3CA6NJZ7 1639 aa15.25■□□□□ 0.03
LPL-203ENST00000520959 RIMBP3BA6NNM3 1639 aa15.25■□□□□ 0.03
LPL-203ENST00000520959 RIMBP3Q9UFD9 1639 aa15.25■□□□□ 0.03
LPL-203ENST00000520959 FGD5Q6ZNL6 1462 aa15.25■□□□□ 0.03
LPL-203ENST00000520959 CHD1O14646 1710 aa15.23■□□□□ 0.03
LPL-203ENST00000520959 ARHGEF11O15085 1522 aa15.23■□□□□ 0.03
LPL-203ENST00000520959 CUX1P39880 1505 aa15.23■□□□□ 0.03
LPL-203ENST00000520959 RAD54L2Q9Y4B4 1467 aa15.23■□□□□ 0.03
LPL-203ENST00000520959 MAGI1Q96QZ7 1491 aaPredicted RBP15.19■□□□□ 0.02
LPL-203ENST00000520959 TDRD9Q8NDG6 1382 aaKnown RBP15.18■□□□□ 0.02
LPL-203ENST00000520959 GRIN2BQ13224 1484 aa15.17■□□□□ 0.02
LPL-203ENST00000520959 SNAPC4Q5SXM2 1469 aa15.15■□□□□ 0.02
LPL-203ENST00000520959 NPM3O75607 178 aaKnown RBP15.15■□□□□ 0.02
LPL-203ENST00000520959 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
LPL-203ENST00000520959 FBLN2P98095 1184 aa15.13■□□□□ 0.01
LPL-203ENST00000520959 ABCA10Q8WWZ4 1543 aa15.12■□□□□ 0.01
LPL-203ENST00000520959 SYNJ1O43426 1573 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms