RNA–Protein interactions for RNA: ENST00000519813.1

TMPRSS4-208, Transcript of transmembrane serine protease 4, humanhuman

TSL 5

Gene TMPRSS4, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-208ENST00000519813 NISCHQ9Y2I1 1504 aa15.32■□□□□ 0.04
TMPRSS4-208ENST00000519813 CCDC180Q9P1Z9 1646 aa13.15□□□□□ -0.3
TMPRSS4-208ENST00000519813 ZCCHC6Q5VYS8 1495 aaKnown RBP12.91□□□□□ -0.34
TMPRSS4-208ENST00000519813 DCAF1Q9Y4B6 1507 aa12.8□□□□□ -0.36
TMPRSS4-208ENST00000519813 MYO15BQ96JP2 1530 aa12.56□□□□□ -0.4
TMPRSS4-208ENST00000519813 SHROOM4Q9ULL8 1493 aa12.55□□□□□ -0.4
TMPRSS4-208ENST00000519813 DCAF8L2P0C7V8 631 aa12.49□□□□□ -0.41
TMPRSS4-208ENST00000519813 SUPT5HO00267 1087 aaKnown RBP12.41□□□□□ -0.42
TMPRSS4-208ENST00000519813 NACADO15069 1562 aa12.26□□□□□ -0.45
TMPRSS4-208ENST00000519813 CHIC1Q5VXU3 224 aa12.17□□□□□ -0.46
TMPRSS4-208ENST00000519813 ABCC9O60706 1549 aa12.07□□□□□ -0.48
TMPRSS4-208ENST00000519813 RSF1Q96T23 1441 aaPredicted RBP12.03□□□□□ -0.48
TMPRSS4-208ENST00000519813 RB1CC1Q8TDY2 1594 aa12.01□□□□□ -0.49
TMPRSS4-208ENST00000519813 SCRIBQ14160 1630 aa11.97□□□□□ -0.49
TMPRSS4-208ENST00000519813 BAZ1AQ9NRL2 1556 aaPredicted RBP11.82□□□□□ -0.52
TMPRSS4-208ENST00000519813 TRIM41Q8WV44 630 aa11.78□□□□□ -0.52
TMPRSS4-208ENST00000519813 CECR2Q9BXF3 1484 aa11.76□□□□□ -0.53
TMPRSS4-208ENST00000519813 MROH2BQ7Z745 1585 aa11.75□□□□□ -0.53
TMPRSS4-208ENST00000519813 TOP2AP11388 1531 aaKnown RBP11.62□□□□□ -0.55
TMPRSS4-208ENST00000519813 SMARCA4P51532 1647 aa11.61□□□□□ -0.55
TMPRSS4-208ENST00000519813 LOC105371045A0A1W2PR82 267 aa11.61□□□□□ -0.55
TMPRSS4-208ENST00000519813 HRCP23327 699 aa11.61□□□□□ -0.55
TMPRSS4-208ENST00000519813 TRIM26Q12899 539 aaPredicted RBP11.61□□□□□ -0.55
TMPRSS4-208ENST00000519813 WIZO95785 1651 aa11.61□□□□□ -0.55
TMPRSS4-208ENST00000519813 PEG3Q9GZU2 1588 aa11.57□□□□□ -0.56
TMPRSS4-208ENST00000519813 PCGF6Q9BYE7 350 aa11.54□□□□□ -0.56
TMPRSS4-208ENST00000519813 EEA1Q15075 1411 aa11.53□□□□□ -0.56
TMPRSS4-208ENST00000519813 ZEB1P37275 1124 aaPredicted RBP11.52□□□□□ -0.57
TMPRSS4-208ENST00000519813 UNC13AQ9UPW8 1703 aa11.52□□□□□ -0.57
TMPRSS4-208ENST00000519813 CCDC88BA6NC98 1476 aa11.51□□□□□ -0.57
TMPRSS4-208ENST00000519813 BICRAQ9NZM4 1560 aa11.5□□□□□ -0.57
TMPRSS4-208ENST00000519813 SMARCA2P51531 1590 aa11.46□□□□□ -0.57
TMPRSS4-208ENST00000519813 EIF4G1Q04637 1599 aaKnown RBP11.45□□□□□ -0.58
TMPRSS4-208ENST00000519813 ATAD2BQ9ULI0 1458 aa11.41□□□□□ -0.58
TMPRSS4-208ENST00000519813 PABPN1Q86U42 306 aaKnown RBP eCLIP11.41□□□□□ -0.58
TMPRSS4-208ENST00000519813 FAM9AQ8IZU1 332 aaPredicted RBP11.38□□□□□ -0.59
TMPRSS4-208ENST00000519813 CSRNP3Q8WYN3 585 aa11.37□□□□□ -0.59
TMPRSS4-208ENST00000519813 TNIKQ9UKE5 1360 aa11.36□□□□□ -0.59
TMPRSS4-208ENST00000519813 BAZ1BQ9UIG0 1483 aaKnown RBP11.35□□□□□ -0.59
TMPRSS4-208ENST00000519813 NCAPD3P42695 1498 aa11.34□□□□□ -0.59
TMPRSS4-208ENST00000519813 WRNQ14191 1432 aaPredicted RBP eCLIP11.33□□□□□ -0.6
TMPRSS4-208ENST00000519813 HMGXB3Q12766 1538 aa11.28□□□□□ -0.6
TMPRSS4-208ENST00000519813 GOLGA3Q08378 1498 aa11.24□□□□□ -0.61
TMPRSS4-208ENST00000519813 CEP164Q9UPV0 1460 aa11.23□□□□□ -0.61
TMPRSS4-208ENST00000519813 ABCC8Q09428 1581 aa11.23□□□□□ -0.61
TMPRSS4-208ENST00000519813 SOGA1O94964 1423 aa11.21□□□□□ -0.61
TMPRSS4-208ENST00000519813 UBTFP17480 764 aaKnown RBP11.2□□□□□ -0.62
TMPRSS4-208ENST00000519813 CEP162Q5TB80 1403 aa11.18□□□□□ -0.62
TMPRSS4-208ENST00000519813 KIF21BO75037 1637 aa11.17□□□□□ -0.62
TMPRSS4-208ENST00000519813 CFTRP13569 1480 aa11.14□□□□□ -0.63
TMPRSS4-208ENST00000519813 TOP2BQ02880 1626 aa11.14□□□□□ -0.63
TMPRSS4-208ENST00000519813 APLP2Q06481 763 aa11.1□□□□□ -0.63
TMPRSS4-208ENST00000519813 SYNJ1O43426 1573 aa11.09□□□□□ -0.63
TMPRSS4-208ENST00000519813 BIVM-ERCC5R4GMW8 1640 aa11.09□□□□□ -0.63
TMPRSS4-208ENST00000519813 ERICH3Q5RHP9 1530 aa11.08□□□□□ -0.64
TMPRSS4-208ENST00000519813 RUSC2Q8N2Y8 1516 aa11.07□□□□□ -0.64
TMPRSS4-208ENST00000519813 KIF27Q86VH2 1401 aa11.07□□□□□ -0.64
TMPRSS4-208ENST00000519813 CADPSQ9ULU8 1353 aa11.06□□□□□ -0.64
TMPRSS4-208ENST00000519813 CLIP1P30622 1438 aa11.06□□□□□ -0.64
TMPRSS4-208ENST00000519813 EHMT2Q96KQ7 1210 aa11.05□□□□□ -0.64
TMPRSS4-208ENST00000519813 PRXQ9BXM0 1461 aa11.05□□□□□ -0.64
TMPRSS4-208ENST00000519813 VPS8Q8N3P4 1428 aa11.03□□□□□ -0.64
TMPRSS4-208ENST00000519813 PPARGC1BQ86YN6 1023 aaKnown RBP11.01□□□□□ -0.65
TMPRSS4-208ENST00000519813 CCER1Q8TC90 406 aaPredicted RBP11.01□□□□□ -0.65
TMPRSS4-208ENST00000519813 CLSPNQ9HAW4 1339 aa10.97□□□□□ -0.65
TMPRSS4-208ENST00000519813 RAPGEF2Q9Y4G8 1499 aa10.97□□□□□ -0.65
TMPRSS4-208ENST00000519813 CUX1P39880 1505 aa10.96□□□□□ -0.65
TMPRSS4-208ENST00000519813 PRDM2Q13029 1718 aa10.95□□□□□ -0.66
TMPRSS4-208ENST00000519813 IGF1RP08069 1367 aa10.91□□□□□ -0.66
TMPRSS4-208ENST00000519813 MAP3K1Q13233 1512 aa10.89□□□□□ -0.67
TMPRSS4-208ENST00000519813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.88□□□□□ -0.67
TMPRSS4-208ENST00000519813 CARMIL1Q5VZK9 1371 aa10.88□□□□□ -0.67
TMPRSS4-208ENST00000519813 CC2D2AQ9P2K1 1620 aa10.87□□□□□ -0.67
TMPRSS4-208ENST00000519813 FANCD2Q9BXW9 1451 aa10.85□□□□□ -0.67
TMPRSS4-208ENST00000519813 CUX2O14529 1486 aa10.84□□□□□ -0.67
TMPRSS4-208ENST00000519813 FHAD1B1AJZ9 1412 aa10.84□□□□□ -0.67
TMPRSS4-208ENST00000519813 LAMC3Q9Y6N6 1575 aa10.82□□□□□ -0.68
TMPRSS4-208ENST00000519813 ABCA10Q8WWZ4 1543 aa10.82□□□□□ -0.68
TMPRSS4-208ENST00000519813 PDS5BQ9NTI5 1447 aa10.82□□□□□ -0.68
TMPRSS4-208ENST00000519813 DNMBPQ6XZF7 1577 aa10.81□□□□□ -0.68
TMPRSS4-208ENST00000519813 FGD5Q6ZNL6 1462 aa10.81□□□□□ -0.68
TMPRSS4-208ENST00000519813 RRBP1Q9P2E9 1410 aaKnown RBP10.8□□□□□ -0.68
TMPRSS4-208ENST00000519813 ARAP1Q96P48 1450 aa10.8□□□□□ -0.68
TMPRSS4-208ENST00000519813 ZNF316A6NFI3 1004 aaPredicted RBP10.78□□□□□ -0.68
TMPRSS4-208ENST00000519813 ARHGAP35Q9NRY4 1499 aa10.77□□□□□ -0.69
TMPRSS4-208ENST00000519813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.76□□□□□ -0.69
TMPRSS4-208ENST00000519813 TOPBP1Q92547 1522 aa10.75□□□□□ -0.69
TMPRSS4-208ENST00000519813 DIEXFQ68CQ4 756 aaKnown RBP10.75□□□□□ -0.69
TMPRSS4-208ENST00000519813 ACIN1Q9UKV3 1341 aaKnown RBP10.75□□□□□ -0.69
TMPRSS4-208ENST00000519813 AQRO60306 1485 aaKnown RBP eCLIP10.74□□□□□ -0.69
TMPRSS4-208ENST00000519813 HNRNPUL2Q1KMD3 747 aaKnown RBP10.74□□□□□ -0.69
TMPRSS4-208ENST00000519813 TIMELESSQ9UNS1 1208 aa10.74□□□□□ -0.69
TMPRSS4-208ENST00000519813 CCNB3Q8WWL7 1395 aa10.73□□□□□ -0.69
TMPRSS4-208ENST00000519813 EFCAB5A4FU69 1503 aa10.73□□□□□ -0.69
TMPRSS4-208ENST00000519813 CUL7Q14999 1698 aa10.73□□□□□ -0.69
TMPRSS4-208ENST00000519813 POLA1P09884 1462 aaPredicted RBP10.72□□□□□ -0.69
TMPRSS4-208ENST00000519813 KANK4Q5T7N3 995 aaPredicted RBP10.71□□□□□ -0.69
TMPRSS4-208ENST00000519813 FMN1Q68DA7 1419 aa10.7□□□□□ -0.7
TMPRSS4-208ENST00000519813 CENPBP07199 599 aaPredicted RBP10.7□□□□□ -0.7
TMPRSS4-208ENST00000519813 TTBK1Q5TCY1 1321 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms