RNA–Protein interactions for RNA: ENST00000518823.5

RUNX1T1-213, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-213ENST00000518823 AEBP2Q6ZN18 517 aaPredicted RBP15.79■□□□□ 0.12
RUNX1T1-213ENST00000518823 CHIC1Q5VXU3 224 aa15.05■□□□□ -0
RUNX1T1-213ENST00000518823 SENP3Q9H4L4 574 aaPredicted RBP13.39□□□□□ -0.27
RUNX1T1-213ENST00000518823 PHF23Q9BUL5 403 aaPredicted RBP13.24□□□□□ -0.29
RUNX1T1-213ENST00000518823 FOXD1Q16676 465 aa12.5□□□□□ -0.41
RUNX1T1-213ENST00000518823 NISCHQ9Y2I1 1504 aa12.21□□□□□ -0.46
RUNX1T1-213ENST00000518823 PLPPR3Q6T4P5 718 aa12.03□□□□□ -0.48
RUNX1T1-213ENST00000518823 PPP6R1Q9UPN7 881 aa11.79□□□□□ -0.52
RUNX1T1-213ENST00000518823 ABCC9O60706 1549 aa11.76□□□□□ -0.53
RUNX1T1-213ENST00000518823 ADRA2BP18089 450 aa11.7□□□□□ -0.54
RUNX1T1-213ENST00000518823 PIAS4Q8N2W9 510 aaPredicted RBP11.64□□□□□ -0.55
RUNX1T1-213ENST00000518823 MSH5O43196 834 aa11.62□□□□□ -0.55
RUNX1T1-213ENST00000518823 DNAJC5BQ9UF47 199 aa11.59□□□□□ -0.55
RUNX1T1-213ENST00000518823 CCDC180Q9P1Z9 1646 aa11.21□□□□□ -0.61
RUNX1T1-213ENST00000518823 POTEDQ86YR6 584 aa11.21□□□□□ -0.61
RUNX1T1-213ENST00000518823 DNAJC5Q9H3Z4 198 aa11.13□□□□□ -0.63
RUNX1T1-213ENST00000518823 RB1CC1Q8TDY2 1594 aa10.98□□□□□ -0.65
RUNX1T1-213ENST00000518823 PABPN1Q86U42 306 aaKnown RBP eCLIP10.87□□□□□ -0.67
RUNX1T1-213ENST00000518823 NACADO15069 1562 aa10.77□□□□□ -0.69
RUNX1T1-213ENST00000518823 MAPK8IP2Q13387 824 aaPredicted RBP10.73□□□□□ -0.69
RUNX1T1-213ENST00000518823 CECR2Q9BXF3 1484 aa10.68□□□□□ -0.7
RUNX1T1-213ENST00000518823 UNC13AQ9UPW8 1703 aa10.67□□□□□ -0.7
RUNX1T1-213ENST00000518823 DMRT2Q9Y5R5 561 aa10.67□□□□□ -0.7
RUNX1T1-213ENST00000518823 SCAF1Q9H7N4 1312 aaKnown RBP10.66□□□□□ -0.7
RUNX1T1-213ENST00000518823 BICRAQ9NZM4 1560 aa10.64□□□□□ -0.71
RUNX1T1-213ENST00000518823 CC2D2AQ9P2K1 1620 aa10.61□□□□□ -0.71
RUNX1T1-213ENST00000518823 DCAF8L2P0C7V8 631 aa10.58□□□□□ -0.72
RUNX1T1-213ENST00000518823 PPP4R3CPQ6ZMV5 832 aa10.56□□□□□ -0.72
RUNX1T1-213ENST00000518823 SHROOM4Q9ULL8 1493 aa10.5□□□□□ -0.73
RUNX1T1-213ENST00000518823 MYO15BQ96JP2 1530 aa10.45□□□□□ -0.74
RUNX1T1-213ENST00000518823 EIF4G1Q04637 1599 aaKnown RBP10.44□□□□□ -0.74
RUNX1T1-213ENST00000518823 CUX2O14529 1486 aa10.44□□□□□ -0.74
RUNX1T1-213ENST00000518823 TRIM41Q8WV44 630 aa10.35□□□□□ -0.75
RUNX1T1-213ENST00000518823 CNKSR2Q8WXI2 1034 aa10.35□□□□□ -0.75
RUNX1T1-213ENST00000518823 HOXD11P31277 338 aaPredicted RBP10.33□□□□□ -0.76
RUNX1T1-213ENST00000518823 RNF216Q9NWF9 866 aaPredicted RBP10.25□□□□□ -0.77
RUNX1T1-213ENST00000518823 ERCC6Q03468 1493 aa10.23□□□□□ -0.77
RUNX1T1-213ENST00000518823 SCRIBQ14160 1630 aa10.16□□□□□ -0.78
RUNX1T1-213ENST00000518823 NCBP3Q53F19 620 aaKnown RBP10.14□□□□□ -0.79
RUNX1T1-213ENST00000518823 DCAF1Q9Y4B6 1507 aa10.08□□□□□ -0.8
RUNX1T1-213ENST00000518823 DCAF8L1A6NGE4 600 aa10.08□□□□□ -0.8
RUNX1T1-213ENST00000518823 NPM3O75607 178 aaKnown RBP10.06□□□□□ -0.8
RUNX1T1-213ENST00000518823 ZCCHC6Q5VYS8 1495 aaKnown RBP9.98□□□□□ -0.81
RUNX1T1-213ENST00000518823 RNF39Q9H2S5 420 aa9.97□□□□□ -0.81
RUNX1T1-213ENST00000518823 NCAPD3P42695 1498 aa9.96□□□□□ -0.82
RUNX1T1-213ENST00000518823 THOC2Q8NI27 1593 aaKnown RBP9.95□□□□□ -0.82
RUNX1T1-213ENST00000518823 KCNA4P22459 653 aa9.94□□□□□ -0.82
RUNX1T1-213ENST00000518823 NESP48681 1621 aa9.93□□□□□ -0.82
RUNX1T1-213ENST00000518823 OSCARQ8IYS5 282 aa9.9□□□□□ -0.82
RUNX1T1-213ENST00000518823 CACNB1Q02641 598 aaPredicted RBP9.87□□□□□ -0.83
RUNX1T1-213ENST00000518823 SMARCA2P51531 1590 aa9.82□□□□□ -0.84
RUNX1T1-213ENST00000518823 BAZ1AQ9NRL2 1556 aaPredicted RBP9.82□□□□□ -0.84
RUNX1T1-213ENST00000518823 LAMC3Q9Y6N6 1575 aa9.82□□□□□ -0.84
RUNX1T1-213ENST00000518823 ATAD2BQ9ULI0 1458 aa9.81□□□□□ -0.84
RUNX1T1-213ENST00000518823 C1QBPQ07021 282 aaKnown RBP9.81□□□□□ -0.84
RUNX1T1-213ENST00000518823 HMGXB3Q12766 1538 aa9.8□□□□□ -0.84
RUNX1T1-213ENST00000518823 PDS5BQ9NTI5 1447 aa9.8□□□□□ -0.84
RUNX1T1-213ENST00000518823 KIF21AQ7Z4S6 1674 aa9.77□□□□□ -0.84
RUNX1T1-213ENST00000518823 TRHP20396 242 aaPredicted RBP9.77□□□□□ -0.85
RUNX1T1-213ENST00000518823 RIMBP3CA6NJZ7 1639 aa9.75□□□□□ -0.85
RUNX1T1-213ENST00000518823 RIMBP3BA6NNM3 1639 aa9.75□□□□□ -0.85
RUNX1T1-213ENST00000518823 RIMBP3Q9UFD9 1639 aa9.75□□□□□ -0.85
RUNX1T1-213ENST00000518823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.74□□□□□ -0.85
RUNX1T1-213ENST00000518823 MRC2Q9UBG0 1479 aa9.71□□□□□ -0.86
RUNX1T1-213ENST00000518823 WDR62O43379 1518 aa9.7□□□□□ -0.86
RUNX1T1-213ENST00000518823 BAZ1BQ9UIG0 1483 aaKnown RBP9.68□□□□□ -0.86
RUNX1T1-213ENST00000518823 ARHGEF11O15085 1522 aa9.67□□□□□ -0.86
RUNX1T1-213ENST00000518823 CYB5RLQ6IPT4 315 aa9.67□□□□□ -0.86
RUNX1T1-213ENST00000518823 SMARCA4P51532 1647 aa9.63□□□□□ -0.87
RUNX1T1-213ENST00000518823 CADPSQ9ULU8 1353 aa9.63□□□□□ -0.87
RUNX1T1-213ENST00000518823 SLC4A2P04920 1241 aa9.62□□□□□ -0.87
RUNX1T1-213ENST00000518823 U3KPZ7 1027 aaPredicted RBP9.62□□□□□ -0.87
RUNX1T1-213ENST00000518823 ILDR1Q86SU0 546 aaPredicted RBP9.6□□□□□ -0.87
RUNX1T1-213ENST00000518823 PEG3Q9GZU2 1588 aa9.57□□□□□ -0.88
RUNX1T1-213ENST00000518823 CEP164Q9UPV0 1460 aa9.55□□□□□ -0.88
RUNX1T1-213ENST00000518823 ARAP1Q96P48 1450 aa9.53□□□□□ -0.88
RUNX1T1-213ENST00000518823 FANCD2Q9BXW9 1451 aa9.49□□□□□ -0.89
RUNX1T1-213ENST00000518823 RSF1Q96T23 1441 aaPredicted RBP9.47□□□□□ -0.89
RUNX1T1-213ENST00000518823 SPINK5Q9NQ38 1064 aaPredicted RBP9.43□□□□□ -0.9
RUNX1T1-213ENST00000518823 URB2Q14146 1524 aaKnown RBP9.42□□□□□ -0.9
RUNX1T1-213ENST00000518823 IFT140Q96RY7 1462 aa9.4□□□□□ -0.9
RUNX1T1-213ENST00000518823 ZNF608Q9ULD9 1512 aaPredicted RBP9.4□□□□□ -0.91
RUNX1T1-213ENST00000518823 CFTRP13569 1480 aa9.38□□□□□ -0.91
RUNX1T1-213ENST00000518823 MROH2BQ7Z745 1585 aa9.37□□□□□ -0.91
RUNX1T1-213ENST00000518823 DSG3P32926 999 aa9.36□□□□□ -0.91
RUNX1T1-213ENST00000518823 SLC4A1APQ9BWU0 796 aaKnown RBP9.36□□□□□ -0.91
RUNX1T1-213ENST00000518823 CHD1O14646 1710 aa9.35□□□□□ -0.91
RUNX1T1-213ENST00000518823 FBLN2P98095 1184 aa9.35□□□□□ -0.91
RUNX1T1-213ENST00000518823 CAPN15O75808 1086 aa9.34□□□□□ -0.91
RUNX1T1-213ENST00000518823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.32□□□□□ -0.92
RUNX1T1-213ENST00000518823 HNRNPUL2Q1KMD3 747 aaKnown RBP9.32□□□□□ -0.92
RUNX1T1-213ENST00000518823 EIF4G3O43432 1585 aaKnown RBP9.32□□□□□ -0.92
RUNX1T1-213ENST00000518823 SAMD1Q6SPF0 538 aaPredicted RBP9.29□□□□□ -0.92
RUNX1T1-213ENST00000518823 KDM4FA0A1W2PPD8 638 aa9.27□□□□□ -0.93
RUNX1T1-213ENST00000518823 MYCNP04198 464 aaPredicted RBP9.27□□□□□ -0.93
RUNX1T1-213ENST00000518823 APLP2Q06481 763 aa9.27□□□□□ -0.93
RUNX1T1-213ENST00000518823 AQRO60306 1485 aaKnown RBP eCLIP9.26□□□□□ -0.93
RUNX1T1-213ENST00000518823 CLASP1Q7Z460 1538 aa9.26□□□□□ -0.93
RUNX1T1-213ENST00000518823 ABCC8Q09428 1581 aa9.24□□□□□ -0.93
RUNX1T1-213ENST00000518823 TOPBP1Q92547 1522 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms