RNA–Protein interactions for RNA: ENST00000518447.1

SCUBE2-203, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 462 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-203ENST00000518447 AEBP2Q6ZN18 517 aaPredicted RBP19.83■□□□□ 0.77
SCUBE2-203ENST00000518447 CHIC1Q5VXU3 224 aa18.48■□□□□ 0.55
SCUBE2-203ENST00000518447 SENP3Q9H4L4 574 aaPredicted RBP17.03■□□□□ 0.32
SCUBE2-203ENST00000518447 PHF23Q9BUL5 403 aaPredicted RBP16.69■□□□□ 0.26
SCUBE2-203ENST00000518447 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
SCUBE2-203ENST00000518447 FOXD1Q16676 465 aa15.99■□□□□ 0.15
SCUBE2-203ENST00000518447 NISCHQ9Y2I1 1504 aa15.33■□□□□ 0.05
SCUBE2-203ENST00000518447 MSH5O43196 834 aa15.28■□□□□ 0.04
SCUBE2-203ENST00000518447 PIAS4Q8N2W9 510 aaPredicted RBP14.74□□□□□ -0.05
SCUBE2-203ENST00000518447 PPP6R1Q9UPN7 881 aa14.29□□□□□ -0.12
SCUBE2-203ENST00000518447 ADRA2BP18089 450 aa14.2□□□□□ -0.14
SCUBE2-203ENST00000518447 ABCC9O60706 1549 aa13.98□□□□□ -0.17
SCUBE2-203ENST00000518447 PLPPR3Q6T4P5 718 aa13.95□□□□□ -0.18
SCUBE2-203ENST00000518447 CCDC180Q9P1Z9 1646 aa13.84□□□□□ -0.19
SCUBE2-203ENST00000518447 CACNB1Q02641 598 aaPredicted RBP13.67□□□□□ -0.22
SCUBE2-203ENST00000518447 DMRT2Q9Y5R5 561 aa13.37□□□□□ -0.27
SCUBE2-203ENST00000518447 MAPK8IP2Q13387 824 aaPredicted RBP13.31□□□□□ -0.28
SCUBE2-203ENST00000518447 RB1CC1Q8TDY2 1594 aa13.18□□□□□ -0.3
SCUBE2-203ENST00000518447 DNAJC5BQ9UF47 199 aa13.17□□□□□ -0.3
SCUBE2-203ENST00000518447 UNC13AQ9UPW8 1703 aa13.09□□□□□ -0.31
SCUBE2-203ENST00000518447 NACADO15069 1562 aa13.03□□□□□ -0.32
SCUBE2-203ENST00000518447 DCAF8L2P0C7V8 631 aa12.97□□□□□ -0.33
SCUBE2-203ENST00000518447 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
SCUBE2-203ENST00000518447 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
SCUBE2-203ENST00000518447 SCAF1Q9H7N4 1312 aaKnown RBP12.95□□□□□ -0.34
SCUBE2-203ENST00000518447 BICRAQ9NZM4 1560 aa12.9□□□□□ -0.35
SCUBE2-203ENST00000518447 DCAF8L1A6NGE4 600 aa12.89□□□□□ -0.35
SCUBE2-203ENST00000518447 MYO15BQ96JP2 1530 aa12.74□□□□□ -0.37
SCUBE2-203ENST00000518447 C1QBPQ07021 282 aaKnown RBP12.72□□□□□ -0.37
SCUBE2-203ENST00000518447 SCRIBQ14160 1630 aa12.71□□□□□ -0.37
SCUBE2-203ENST00000518447 ZCCHC6Q5VYS8 1495 aaKnown RBP12.71□□□□□ -0.38
SCUBE2-203ENST00000518447 POTEHQ6S545 545 aa12.7□□□□□ -0.38
SCUBE2-203ENST00000518447 CC2D2AQ9P2K1 1620 aa12.62□□□□□ -0.39
SCUBE2-203ENST00000518447 DCAF1Q9Y4B6 1507 aa12.58□□□□□ -0.4
SCUBE2-203ENST00000518447 EIF4G1Q04637 1599 aaKnown RBP12.55□□□□□ -0.4
SCUBE2-203ENST00000518447 CECR2Q9BXF3 1484 aa12.54□□□□□ -0.4
SCUBE2-203ENST00000518447 HOXD11P31277 338 aaPredicted RBP12.53□□□□□ -0.4
SCUBE2-203ENST00000518447 SHROOM4Q9ULL8 1493 aa12.51□□□□□ -0.41
SCUBE2-203ENST00000518447 RNF216Q9NWF9 866 aaPredicted RBP12.2□□□□□ -0.46
SCUBE2-203ENST00000518447 PPP4R3CPQ6ZMV5 832 aa12.12□□□□□ -0.47
SCUBE2-203ENST00000518447 CNKSR2Q8WXI2 1034 aa12.08□□□□□ -0.48
SCUBE2-203ENST00000518447 SMARCA4P51532 1647 aa12.05□□□□□ -0.48
SCUBE2-203ENST00000518447 DNAJC5Q9H3Z4 198 aa12.03□□□□□ -0.48
SCUBE2-203ENST00000518447 ERCC6Q03468 1493 aa12.02□□□□□ -0.49
SCUBE2-203ENST00000518447 NESP48681 1621 aa12.01□□□□□ -0.49
SCUBE2-203ENST00000518447 ATAD2BQ9ULI0 1458 aa12.01□□□□□ -0.49
SCUBE2-203ENST00000518447 NCAPD3P42695 1498 aa12□□□□□ -0.49
SCUBE2-203ENST00000518447 HMGXB3Q12766 1538 aa11.96□□□□□ -0.49
SCUBE2-203ENST00000518447 CUX2O14529 1486 aa11.96□□□□□ -0.49
SCUBE2-203ENST00000518447 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.95□□□□□ -0.5
SCUBE2-203ENST00000518447 SMARCA2P51531 1590 aa11.95□□□□□ -0.5
SCUBE2-203ENST00000518447 THOC2Q8NI27 1593 aaKnown RBP11.92□□□□□ -0.5
SCUBE2-203ENST00000518447 KIF21AQ7Z4S6 1674 aa11.91□□□□□ -0.5
SCUBE2-203ENST00000518447 BAZ1BQ9UIG0 1483 aaKnown RBP11.9□□□□□ -0.5
SCUBE2-203ENST00000518447 BAZ1AQ9NRL2 1556 aaPredicted RBP11.9□□□□□ -0.5
SCUBE2-203ENST00000518447 MROH2BQ7Z745 1585 aa11.88□□□□□ -0.51
SCUBE2-203ENST00000518447 DSG3P32926 999 aa11.86□□□□□ -0.51
SCUBE2-203ENST00000518447 PEG3Q9GZU2 1588 aa11.85□□□□□ -0.51
SCUBE2-203ENST00000518447 LAMC3Q9Y6N6 1575 aa11.8□□□□□ -0.52
SCUBE2-203ENST00000518447 WIZO95785 1651 aa11.8□□□□□ -0.52
SCUBE2-203ENST00000518447 CAPN15O75808 1086 aa11.73□□□□□ -0.53
SCUBE2-203ENST00000518447 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.53
SCUBE2-203ENST00000518447 PDS5BQ9NTI5 1447 aa11.66□□□□□ -0.54
SCUBE2-203ENST00000518447 WDR62O43379 1518 aa11.65□□□□□ -0.54
SCUBE2-203ENST00000518447 MRC2Q9UBG0 1479 aa11.65□□□□□ -0.54
SCUBE2-203ENST00000518447 CADPSQ9ULU8 1353 aa11.63□□□□□ -0.55
SCUBE2-203ENST00000518447 U3KPZ7 1027 aaPredicted RBP11.6□□□□□ -0.55
SCUBE2-203ENST00000518447 CEP164Q9UPV0 1460 aa11.59□□□□□ -0.55
SCUBE2-203ENST00000518447 TRIM41Q8WV44 630 aa11.58□□□□□ -0.56
SCUBE2-203ENST00000518447 FANCD2Q9BXW9 1451 aa11.57□□□□□ -0.56
SCUBE2-203ENST00000518447 TOP2AP11388 1531 aaKnown RBP11.55□□□□□ -0.56
SCUBE2-203ENST00000518447 PRDM2Q13029 1718 aa11.54□□□□□ -0.56
SCUBE2-203ENST00000518447 URB2Q14146 1524 aaKnown RBP11.54□□□□□ -0.56
SCUBE2-203ENST00000518447 RSF1Q96T23 1441 aaPredicted RBP11.52□□□□□ -0.56
SCUBE2-203ENST00000518447 CFTRP13569 1480 aa11.51□□□□□ -0.57
SCUBE2-203ENST00000518447 SP7Q8TDD2 431 aaPredicted RBP11.49□□□□□ -0.57
SCUBE2-203ENST00000518447 CHRDL2Q6WN34 429 aa11.44□□□□□ -0.58
SCUBE2-203ENST00000518447 ZNF608Q9ULD9 1512 aaPredicted RBP11.43□□□□□ -0.58
SCUBE2-203ENST00000518447 RIMBP3CA6NJZ7 1639 aa11.41□□□□□ -0.58
SCUBE2-203ENST00000518447 RIMBP3BA6NNM3 1639 aa11.41□□□□□ -0.58
SCUBE2-203ENST00000518447 RIMBP3Q9UFD9 1639 aa11.41□□□□□ -0.58
SCUBE2-203ENST00000518447 CCDC88BA6NC98 1476 aa11.4□□□□□ -0.58
SCUBE2-203ENST00000518447 EIF4G3O43432 1585 aaKnown RBP11.39□□□□□ -0.59
SCUBE2-203ENST00000518447 ABCB7O75027 752 aa11.38□□□□□ -0.59
SCUBE2-203ENST00000518447 NCBP3Q53F19 620 aaKnown RBP11.37□□□□□ -0.59
SCUBE2-203ENST00000518447 CHD1O14646 1710 aa11.37□□□□□ -0.59
SCUBE2-203ENST00000518447 TOPBP1Q92547 1522 aa11.36□□□□□ -0.59
SCUBE2-203ENST00000518447 TRHP20396 242 aaPredicted RBP11.33□□□□□ -0.6
SCUBE2-203ENST00000518447 OSCARQ8IYS5 282 aa11.33□□□□□ -0.6
SCUBE2-203ENST00000518447 RBM42Q9BTD8 480 aaKnown RBP11.32□□□□□ -0.6
SCUBE2-203ENST00000518447 IFT140Q96RY7 1462 aa11.32□□□□□ -0.6
SCUBE2-203ENST00000518447 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
SCUBE2-203ENST00000518447 DNMBPQ6XZF7 1577 aa11.31□□□□□ -0.6
SCUBE2-203ENST00000518447 ARHGEF11O15085 1522 aa11.3□□□□□ -0.6
SCUBE2-203ENST00000518447 AQRO60306 1485 aaKnown RBP eCLIP11.26□□□□□ -0.61
SCUBE2-203ENST00000518447 ZNF219Q9P2Y4 722 aaPredicted RBP11.25□□□□□ -0.61
SCUBE2-203ENST00000518447 POLA1P09884 1462 aaPredicted RBP11.24□□□□□ -0.61
SCUBE2-203ENST00000518447 RAD54L2Q9Y4B4 1467 aa11.24□□□□□ -0.61
SCUBE2-203ENST00000518447 NPM3O75607 178 aaKnown RBP11.23□□□□□ -0.61
SCUBE2-203ENST00000518447 ARAP1Q96P48 1450 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms