RNA–Protein interactions for RNA: ENST00000518446.1

SFTA3-203, Transcript of surfactant associated 3, humanhuman

TSL 3

Gene SFTA3, Length 791 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTA3-203ENST00000518446 AEBP2Q6ZN18 517 aaPredicted RBP27.62■■■□□ 2.01
SFTA3-203ENST00000518446 CHIC1Q5VXU3 224 aa26.21■■□□□ 1.79
SFTA3-203ENST00000518446 SENP3Q9H4L4 574 aaPredicted RBP23.6■■□□□ 1.37
SFTA3-203ENST00000518446 PHF23Q9BUL5 403 aaPredicted RBP23.28■■□□□ 1.32
SFTA3-203ENST00000518446 FOXD1Q16676 465 aa21.98■■□□□ 1.11
SFTA3-203ENST00000518446 NISCHQ9Y2I1 1504 aa21.72■■□□□ 1.07
SFTA3-203ENST00000518446 PLPPR3Q6T4P5 718 aa20.92■□□□□ 0.94
SFTA3-203ENST00000518446 MSH5O43196 834 aa20.63■□□□□ 0.89
SFTA3-203ENST00000518446 PPP6R1Q9UPN7 881 aa20.5■□□□□ 0.87
SFTA3-203ENST00000518446 PIAS4Q8N2W9 510 aaPredicted RBP20.49■□□□□ 0.87
SFTA3-203ENST00000518446 ADRA2BP18089 450 aa20.4■□□□□ 0.86
SFTA3-203ENST00000518446 POTEDQ86YR6 584 aa20.19■□□□□ 0.82
SFTA3-203ENST00000518446 ABCC9O60706 1549 aa20.18■□□□□ 0.82
SFTA3-203ENST00000518446 DNAJC5BQ9UF47 199 aa20.15■□□□□ 0.82
SFTA3-203ENST00000518446 DNAJC5Q9H3Z4 198 aa19.43■□□□□ 0.7
SFTA3-203ENST00000518446 CCDC180Q9P1Z9 1646 aa19.31■□□□□ 0.68
SFTA3-203ENST00000518446 MAPK8IP2Q13387 824 aaPredicted RBP18.76■□□□□ 0.59
SFTA3-203ENST00000518446 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
SFTA3-203ENST00000518446 DMRT2Q9Y5R5 561 aa18.71■□□□□ 0.59
SFTA3-203ENST00000518446 PABPN1Q86U42 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
SFTA3-203ENST00000518446 RB1CC1Q8TDY2 1594 aa18.57■□□□□ 0.56
SFTA3-203ENST00000518446 PPP4R3CPQ6ZMV5 832 aa18.31■□□□□ 0.52
SFTA3-203ENST00000518446 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
SFTA3-203ENST00000518446 UNC13AQ9UPW8 1703 aa18.23■□□□□ 0.51
SFTA3-203ENST00000518446 CC2D2AQ9P2K1 1620 aa18.15■□□□□ 0.5
SFTA3-203ENST00000518446 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.5
SFTA3-203ENST00000518446 BICRAQ9NZM4 1560 aa18.11■□□□□ 0.49
SFTA3-203ENST00000518446 NACADO15069 1562 aa18.1■□□□□ 0.49
SFTA3-203ENST00000518446 TRIM41Q8WV44 630 aa18.09■□□□□ 0.49
SFTA3-203ENST00000518446 HOXD11P31277 338 aaPredicted RBP18.03■□□□□ 0.48
SFTA3-203ENST00000518446 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
SFTA3-203ENST00000518446 CNKSR2Q8WXI2 1034 aa18.01■□□□□ 0.47
SFTA3-203ENST00000518446 MYO15BQ96JP2 1530 aa18■□□□□ 0.47
SFTA3-203ENST00000518446 DCAF1Q9Y4B6 1507 aa17.98■□□□□ 0.47
SFTA3-203ENST00000518446 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
SFTA3-203ENST00000518446 CUX2O14529 1486 aa17.87■□□□□ 0.45
SFTA3-203ENST00000518446 DCAF8L1A6NGE4 600 aa17.83■□□□□ 0.44
SFTA3-203ENST00000518446 EIF4G1Q04637 1599 aaKnown RBP17.76■□□□□ 0.43
SFTA3-203ENST00000518446 CACNB1Q02641 598 aaPredicted RBP17.68■□□□□ 0.42
SFTA3-203ENST00000518446 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
SFTA3-203ENST00000518446 SCRIBQ14160 1630 aa17.61■□□□□ 0.41
SFTA3-203ENST00000518446 SHROOM4Q9ULL8 1493 aa17.61■□□□□ 0.41
SFTA3-203ENST00000518446 RNF39Q9H2S5 420 aa17.59■□□□□ 0.41
SFTA3-203ENST00000518446 ERCC6Q03468 1493 aa17.5■□□□□ 0.39
SFTA3-203ENST00000518446 C1QBPQ07021 282 aaKnown RBP17.36■□□□□ 0.37
SFTA3-203ENST00000518446 NPM3O75607 178 aaKnown RBP17.32■□□□□ 0.36
SFTA3-203ENST00000518446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.33
SFTA3-203ENST00000518446 THOC2Q8NI27 1593 aaKnown RBP17.02■□□□□ 0.31
SFTA3-203ENST00000518446 NESP48681 1621 aa16.97■□□□□ 0.31
SFTA3-203ENST00000518446 KCNA4P22459 653 aa16.91■□□□□ 0.3
SFTA3-203ENST00000518446 ILDR1Q86SU0 546 aaPredicted RBP16.9■□□□□ 0.3
SFTA3-203ENST00000518446 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
SFTA3-203ENST00000518446 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
SFTA3-203ENST00000518446 SMARCA4P51532 1647 aa16.86■□□□□ 0.29
SFTA3-203ENST00000518446 BAZ1AQ9NRL2 1556 aaPredicted RBP16.85■□□□□ 0.29
SFTA3-203ENST00000518446 RIMBP3CA6NJZ7 1639 aa16.83■□□□□ 0.28
SFTA3-203ENST00000518446 RIMBP3BA6NNM3 1639 aa16.83■□□□□ 0.28
SFTA3-203ENST00000518446 RIMBP3Q9UFD9 1639 aa16.83■□□□□ 0.28
SFTA3-203ENST00000518446 SMARCA2P51531 1590 aa16.81■□□□□ 0.28
SFTA3-203ENST00000518446 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
SFTA3-203ENST00000518446 MROH2BQ7Z745 1585 aa16.76■□□□□ 0.27
SFTA3-203ENST00000518446 NCAPD3P42695 1498 aa16.73■□□□□ 0.27
SFTA3-203ENST00000518446 KIF21AQ7Z4S6 1674 aa16.71■□□□□ 0.27
SFTA3-203ENST00000518446 ATAD2BQ9ULI0 1458 aa16.68■□□□□ 0.26
SFTA3-203ENST00000518446 PEG3Q9GZU2 1588 aa16.68■□□□□ 0.26
SFTA3-203ENST00000518446 CYB5RLQ6IPT4 315 aa16.63■□□□□ 0.25
SFTA3-203ENST00000518446 HMGXB3Q12766 1538 aa16.62■□□□□ 0.25
SFTA3-203ENST00000518446 WIZO95785 1651 aa16.61■□□□□ 0.25
SFTA3-203ENST00000518446 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
SFTA3-203ENST00000518446 RSF1Q96T23 1441 aaPredicted RBP16.59■□□□□ 0.25
SFTA3-203ENST00000518446 LAMC3Q9Y6N6 1575 aa16.57■□□□□ 0.24
SFTA3-203ENST00000518446 BAZ1BQ9UIG0 1483 aaKnown RBP16.57■□□□□ 0.24
SFTA3-203ENST00000518446 SLC4A2P04920 1241 aa16.57■□□□□ 0.24
SFTA3-203ENST00000518446 PDS5BQ9NTI5 1447 aa16.53■□□□□ 0.24
SFTA3-203ENST00000518446 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
SFTA3-203ENST00000518446 MRC2Q9UBG0 1479 aa16.47■□□□□ 0.23
SFTA3-203ENST00000518446 WDR62O43379 1518 aa16.46■□□□□ 0.23
SFTA3-203ENST00000518446 CAPN15O75808 1086 aa16.46■□□□□ 0.23
SFTA3-203ENST00000518446 DSG3P32926 999 aa16.44■□□□□ 0.22
SFTA3-203ENST00000518446 TOP2AP11388 1531 aaKnown RBP16.42■□□□□ 0.22
SFTA3-203ENST00000518446 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
SFTA3-203ENST00000518446 APLP2Q06481 763 aa16.33■□□□□ 0.2
SFTA3-203ENST00000518446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
SFTA3-203ENST00000518446 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
SFTA3-203ENST00000518446 SUPT5HO00267 1087 aaKnown RBP16.24■□□□□ 0.19
SFTA3-203ENST00000518446 ZNF219Q9P2Y4 722 aaPredicted RBP16.22■□□□□ 0.19
SFTA3-203ENST00000518446 SAMD1Q6SPF0 538 aaPredicted RBP16.2■□□□□ 0.18
SFTA3-203ENST00000518446 CCDC88BA6NC98 1476 aa16.2■□□□□ 0.18
SFTA3-203ENST00000518446 CADPSQ9ULU8 1353 aa16.17■□□□□ 0.18
SFTA3-203ENST00000518446 CEP164Q9UPV0 1460 aa16.14■□□□□ 0.17
SFTA3-203ENST00000518446 CFTRP13569 1480 aa16.11■□□□□ 0.17
SFTA3-203ENST00000518446 PRDM2Q13029 1718 aa16.11■□□□□ 0.17
SFTA3-203ENST00000518446 ABCB7O75027 752 aa16.05■□□□□ 0.16
SFTA3-203ENST00000518446 MYCNP04198 464 aaPredicted RBP16.05■□□□□ 0.16
SFTA3-203ENST00000518446 KDM4FA0A1W2PPD8 638 aa16.03■□□□□ 0.16
SFTA3-203ENST00000518446 ZNF608Q9ULD9 1512 aaPredicted RBP16.02■□□□□ 0.15
SFTA3-203ENST00000518446 CHD1O14646 1710 aa16.01■□□□□ 0.15
SFTA3-203ENST00000518446 FANCD2Q9BXW9 1451 aa16■□□□□ 0.15
SFTA3-203ENST00000518446 URB2Q14146 1524 aaKnown RBP15.97■□□□□ 0.15
SFTA3-203ENST00000518446 SLC4A1APQ9BWU0 796 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms