RNA–Protein interactions for RNA: ENST00000518303.5

PSD3-206, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 3

Gene PSD3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-206ENST00000518303 AEBP2Q6ZN18 517 aaPredicted RBP22.71■■□□□ 1.23
PSD3-206ENST00000518303 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
PSD3-206ENST00000518303 SENP3Q9H4L4 574 aaPredicted RBP19.32■□□□□ 0.68
PSD3-206ENST00000518303 PHF23Q9BUL5 403 aaPredicted RBP19.13■□□□□ 0.65
PSD3-206ENST00000518303 NISCHQ9Y2I1 1504 aa19.12■□□□□ 0.65
PSD3-206ENST00000518303 FOXD1Q16676 465 aa18.06■□□□□ 0.48
PSD3-206ENST00000518303 PLPPR3Q6T4P5 718 aa17.14■□□□□ 0.33
PSD3-206ENST00000518303 PIAS4Q8N2W9 510 aaPredicted RBP16.89■□□□□ 0.29
PSD3-206ENST00000518303 PPP6R1Q9UPN7 881 aa16.89■□□□□ 0.29
PSD3-206ENST00000518303 MSH5O43196 834 aa16.86■□□□□ 0.29
PSD3-206ENST00000518303 ADRA2BP18089 450 aa16.86■□□□□ 0.29
PSD3-206ENST00000518303 CCDC180Q9P1Z9 1646 aa16.78■□□□□ 0.28
PSD3-206ENST00000518303 POTEDQ86YR6 584 aa16.59■□□□□ 0.25
PSD3-206ENST00000518303 ABCC9O60706 1549 aa16.19■□□□□ 0.18
PSD3-206ENST00000518303 ZCCHC6Q5VYS8 1495 aaKnown RBP16■□□□□ 0.15
PSD3-206ENST00000518303 DCAF1Q9Y4B6 1507 aa15.85■□□□□ 0.13
PSD3-206ENST00000518303 DCAF8L2P0C7V8 631 aa15.82■□□□□ 0.12
PSD3-206ENST00000518303 MYO15BQ96JP2 1530 aa15.81■□□□□ 0.12
PSD3-206ENST00000518303 NACADO15069 1562 aa15.76■□□□□ 0.11
PSD3-206ENST00000518303 RB1CC1Q8TDY2 1594 aa15.68■□□□□ 0.1
PSD3-206ENST00000518303 MAPK8IP2Q13387 824 aaPredicted RBP15.52■□□□□ 0.08
PSD3-206ENST00000518303 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
PSD3-206ENST00000518303 SCAF1Q9H7N4 1312 aaKnown RBP15.34■□□□□ 0.05
PSD3-206ENST00000518303 DMRT2Q9Y5R5 561 aa15.31■□□□□ 0.04
PSD3-206ENST00000518303 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.03
PSD3-206ENST00000518303 BICRAQ9NZM4 1560 aa15.22■□□□□ 0.03
PSD3-206ENST00000518303 UNC13AQ9UPW8 1703 aa15.22■□□□□ 0.03
PSD3-206ENST00000518303 PABPN1Q86U42 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
PSD3-206ENST00000518303 PPP4R3CPQ6ZMV5 832 aa15.07■□□□□ 0
PSD3-206ENST00000518303 CECR2Q9BXF3 1484 aa14.87□□□□□ -0.03
PSD3-206ENST00000518303 DCAF8L1A6NGE4 600 aa14.84□□□□□ -0.03
PSD3-206ENST00000518303 EIF4G1Q04637 1599 aaKnown RBP14.78□□□□□ -0.04
PSD3-206ENST00000518303 BAZ1AQ9NRL2 1556 aaPredicted RBP14.78□□□□□ -0.04
PSD3-206ENST00000518303 CNKSR2Q8WXI2 1034 aa14.75□□□□□ -0.05
PSD3-206ENST00000518303 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
PSD3-206ENST00000518303 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
PSD3-206ENST00000518303 HOXD11P31277 338 aaPredicted RBP14.71□□□□□ -0.05
PSD3-206ENST00000518303 RSF1Q96T23 1441 aaPredicted RBP14.71□□□□□ -0.05
PSD3-206ENST00000518303 DNAJC5BQ9UF47 199 aa14.63□□□□□ -0.07
PSD3-206ENST00000518303 ATAD2BQ9ULI0 1458 aa14.63□□□□□ -0.07
PSD3-206ENST00000518303 CC2D2AQ9P2K1 1620 aa14.63□□□□□ -0.07
PSD3-206ENST00000518303 PEG3Q9GZU2 1588 aa14.62□□□□□ -0.07
PSD3-206ENST00000518303 RNF216Q9NWF9 866 aaPredicted RBP14.6□□□□□ -0.07
PSD3-206ENST00000518303 NCAPD3P42695 1498 aa14.59□□□□□ -0.07
PSD3-206ENST00000518303 CACNB1Q02641 598 aaPredicted RBP14.59□□□□□ -0.07
PSD3-206ENST00000518303 SMARCA2P51531 1590 aa14.59□□□□□ -0.07
PSD3-206ENST00000518303 WIZO95785 1651 aa14.53□□□□□ -0.08
PSD3-206ENST00000518303 SUPT5HO00267 1087 aaKnown RBP14.53□□□□□ -0.08
PSD3-206ENST00000518303 HMGXB3Q12766 1538 aa14.5□□□□□ -0.09
PSD3-206ENST00000518303 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
PSD3-206ENST00000518303 TOP2AP11388 1531 aaKnown RBP14.45□□□□□ -0.1
PSD3-206ENST00000518303 NCBP3Q53F19 620 aaKnown RBP14.44□□□□□ -0.1
PSD3-206ENST00000518303 RNF39Q9H2S5 420 aa14.39□□□□□ -0.11
PSD3-206ENST00000518303 CCDC88BA6NC98 1476 aa14.3□□□□□ -0.12
PSD3-206ENST00000518303 NPM3O75607 178 aaKnown RBP14.25□□□□□ -0.13
PSD3-206ENST00000518303 CADPSQ9ULU8 1353 aa14.18□□□□□ -0.14
PSD3-206ENST00000518303 C1QBPQ07021 282 aaKnown RBP14.17□□□□□ -0.14
PSD3-206ENST00000518303 CFTRP13569 1480 aa14.15□□□□□ -0.14
PSD3-206ENST00000518303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.15
PSD3-206ENST00000518303 NESP48681 1621 aa14.1□□□□□ -0.15
PSD3-206ENST00000518303 LAMC3Q9Y6N6 1575 aa14.09□□□□□ -0.15
PSD3-206ENST00000518303 PDS5BQ9NTI5 1447 aa14.02□□□□□ -0.16
PSD3-206ENST00000518303 FANCD2Q9BXW9 1451 aa13.99□□□□□ -0.17
PSD3-206ENST00000518303 KCNA4P22459 653 aa13.98□□□□□ -0.17
PSD3-206ENST00000518303 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
PSD3-206ENST00000518303 ERCC6Q03468 1493 aa13.91□□□□□ -0.18
PSD3-206ENST00000518303 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
PSD3-206ENST00000518303 MRC2Q9UBG0 1479 aa13.85□□□□□ -0.19
PSD3-206ENST00000518303 KIF21AQ7Z4S6 1674 aa13.85□□□□□ -0.19
PSD3-206ENST00000518303 WRNQ14191 1432 aaPredicted RBP eCLIP13.84□□□□□ -0.19
PSD3-206ENST00000518303 URB2Q14146 1524 aaKnown RBP13.83□□□□□ -0.2
PSD3-206ENST00000518303 ABCC8Q09428 1581 aa13.82□□□□□ -0.2
PSD3-206ENST00000518303 CUX1P39880 1505 aa13.8□□□□□ -0.2
PSD3-206ENST00000518303 TOPBP1Q92547 1522 aa13.8□□□□□ -0.2
PSD3-206ENST00000518303 WDR62O43379 1518 aa13.79□□□□□ -0.2
PSD3-206ENST00000518303 THOC2Q8NI27 1593 aaKnown RBP13.79□□□□□ -0.2
PSD3-206ENST00000518303 DNMBPQ6XZF7 1577 aa13.78□□□□□ -0.2
PSD3-206ENST00000518303 U3KPZ7 1027 aaPredicted RBP13.77□□□□□ -0.21
PSD3-206ENST00000518303 SYNJ1O43426 1573 aa13.75□□□□□ -0.21
PSD3-206ENST00000518303 TOP2BQ02880 1626 aa13.74□□□□□ -0.21
PSD3-206ENST00000518303 TRIM41Q8WV44 630 aa13.72□□□□□ -0.21
PSD3-206ENST00000518303 BIVM-ERCC5R4GMW8 1640 aa13.72□□□□□ -0.21
PSD3-206ENST00000518303 POLA1P09884 1462 aaPredicted RBP13.7□□□□□ -0.22
PSD3-206ENST00000518303 FGD5Q6ZNL6 1462 aa13.7□□□□□ -0.22
PSD3-206ENST00000518303 CUX2O14529 1486 aa13.68□□□□□ -0.22
PSD3-206ENST00000518303 SOGA1O94964 1423 aa13.66□□□□□ -0.22
PSD3-206ENST00000518303 IFT140Q96RY7 1462 aa13.64□□□□□ -0.23
PSD3-206ENST00000518303 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
PSD3-206ENST00000518303 RAD54L2Q9Y4B4 1467 aa13.63□□□□□ -0.23
PSD3-206ENST00000518303 CAPN15O75808 1086 aa13.63□□□□□ -0.23
PSD3-206ENST00000518303 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
PSD3-206ENST00000518303 ABCA10Q8WWZ4 1543 aa13.6□□□□□ -0.23
PSD3-206ENST00000518303 TARBP1Q13395 1621 aaKnown RBP13.6□□□□□ -0.23
PSD3-206ENST00000518303 TDRD9Q8NDG6 1382 aaKnown RBP13.55□□□□□ -0.24
PSD3-206ENST00000518303 ZNF608Q9ULD9 1512 aaPredicted RBP13.54□□□□□ -0.24
PSD3-206ENST00000518303 KIF27Q86VH2 1401 aa13.53□□□□□ -0.24
PSD3-206ENST00000518303 WDR97A6NE52 1622 aa13.51□□□□□ -0.25
PSD3-206ENST00000518303 AQRO60306 1485 aaKnown RBP eCLIP13.51□□□□□ -0.25
PSD3-206ENST00000518303 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
PSD3-206ENST00000518303 GAPVD1Q14C86 1478 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 254.8 ms