RNA–Protein interactions for RNA: ENST00000513936.6

TBC1D1-218, Transcript of TBC1 domain family member 1, humanhuman

TSL 5

Gene TBC1D1, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-218ENST00000513936 NISCHQ9Y2I1 1504 aa16.58■□□□□ 0.24
TBC1D1-218ENST00000513936 CHIC1Q5VXU3 224 aa14.63□□□□□ -0.07
TBC1D1-218ENST00000513936 AEBP2Q6ZN18 517 aaPredicted RBP14.6□□□□□ -0.07
TBC1D1-218ENST00000513936 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
TBC1D1-218ENST00000513936 ZCCHC6Q5VYS8 1495 aaKnown RBP14.06□□□□□ -0.16
TBC1D1-218ENST00000513936 DCAF1Q9Y4B6 1507 aa13.87□□□□□ -0.19
TBC1D1-218ENST00000513936 SHROOM4Q9ULL8 1493 aa13.68□□□□□ -0.22
TBC1D1-218ENST00000513936 SUPT5HO00267 1087 aaKnown RBP13.55□□□□□ -0.24
TBC1D1-218ENST00000513936 MYO15BQ96JP2 1530 aa13.53□□□□□ -0.24
TBC1D1-218ENST00000513936 DCAF8L2P0C7V8 631 aa13.3□□□□□ -0.28
TBC1D1-218ENST00000513936 ABCC9O60706 1549 aa13.24□□□□□ -0.29
TBC1D1-218ENST00000513936 NACADO15069 1562 aa13.15□□□□□ -0.3
TBC1D1-218ENST00000513936 HRCP23327 699 aa13.13□□□□□ -0.31
TBC1D1-218ENST00000513936 RSF1Q96T23 1441 aaPredicted RBP13.08□□□□□ -0.32
TBC1D1-218ENST00000513936 RB1CC1Q8TDY2 1594 aa13.03□□□□□ -0.32
TBC1D1-218ENST00000513936 PHF23Q9BUL5 403 aaPredicted RBP12.96□□□□□ -0.33
TBC1D1-218ENST00000513936 SCRIBQ14160 1630 aa12.95□□□□□ -0.34
TBC1D1-218ENST00000513936 TRIM26Q12899 539 aaPredicted RBP12.91□□□□□ -0.34
TBC1D1-218ENST00000513936 PCGF6Q9BYE7 350 aa12.88□□□□□ -0.35
TBC1D1-218ENST00000513936 ZEB1P37275 1124 aaPredicted RBP12.87□□□□□ -0.35
TBC1D1-218ENST00000513936 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
TBC1D1-218ENST00000513936 BAZ1AQ9NRL2 1556 aaPredicted RBP12.79□□□□□ -0.36
TBC1D1-218ENST00000513936 LOC105371045A0A1W2PR82 267 aa12.77□□□□□ -0.37
TBC1D1-218ENST00000513936 MROH2BQ7Z745 1585 aa12.73□□□□□ -0.37
TBC1D1-218ENST00000513936 CECR2Q9BXF3 1484 aa12.71□□□□□ -0.38
TBC1D1-218ENST00000513936 TOP2AP11388 1531 aaKnown RBP12.64□□□□□ -0.39
TBC1D1-218ENST00000513936 EIF4G1Q04637 1599 aaKnown RBP12.62□□□□□ -0.39
TBC1D1-218ENST00000513936 EEA1Q15075 1411 aa12.62□□□□□ -0.39
TBC1D1-218ENST00000513936 WIZO95785 1651 aa12.61□□□□□ -0.39
TBC1D1-218ENST00000513936 SMARCA4P51532 1647 aa12.57□□□□□ -0.4
TBC1D1-218ENST00000513936 WRNQ14191 1432 aaPredicted RBP eCLIP12.53□□□□□ -0.4
TBC1D1-218ENST00000513936 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.41
TBC1D1-218ENST00000513936 SMARCA2P51531 1590 aa12.48□□□□□ -0.41
TBC1D1-218ENST00000513936 CCDC88BA6NC98 1476 aa12.47□□□□□ -0.41
TBC1D1-218ENST00000513936 TNIKQ9UKE5 1360 aa12.45□□□□□ -0.42
TBC1D1-218ENST00000513936 PPARGC1BQ86YN6 1023 aaKnown RBP12.44□□□□□ -0.42
TBC1D1-218ENST00000513936 FAM9AQ8IZU1 332 aaPredicted RBP12.42□□□□□ -0.42
TBC1D1-218ENST00000513936 UNC13AQ9UPW8 1703 aa12.4□□□□□ -0.43
TBC1D1-218ENST00000513936 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
TBC1D1-218ENST00000513936 GOLGA3Q08378 1498 aa12.34□□□□□ -0.43
TBC1D1-218ENST00000513936 BICRAQ9NZM4 1560 aa12.33□□□□□ -0.44
TBC1D1-218ENST00000513936 CEP162Q5TB80 1403 aa12.32□□□□□ -0.44
TBC1D1-218ENST00000513936 CEP164Q9UPV0 1460 aa12.29□□□□□ -0.44
TBC1D1-218ENST00000513936 PELP1Q8IZL8 1130 aaKnown RBP12.29□□□□□ -0.44
TBC1D1-218ENST00000513936 BAZ1BQ9UIG0 1483 aaKnown RBP12.28□□□□□ -0.44
TBC1D1-218ENST00000513936 KIF21BO75037 1637 aa12.28□□□□□ -0.44
TBC1D1-218ENST00000513936 ABCC8Q09428 1581 aa12.27□□□□□ -0.44
TBC1D1-218ENST00000513936 ATAD2BQ9ULI0 1458 aa12.25□□□□□ -0.45
TBC1D1-218ENST00000513936 SOGA1O94964 1423 aa12.24□□□□□ -0.45
TBC1D1-218ENST00000513936 CCER1Q8TC90 406 aaPredicted RBP12.21□□□□□ -0.45
TBC1D1-218ENST00000513936 SENP3Q9H4L4 574 aaPredicted RBP12.21□□□□□ -0.45
TBC1D1-218ENST00000513936 UBTFP17480 764 aaKnown RBP12.16□□□□□ -0.46
TBC1D1-218ENST00000513936 HMGXB3Q12766 1538 aa12.15□□□□□ -0.46
TBC1D1-218ENST00000513936 ERICH3Q5RHP9 1530 aa12.14□□□□□ -0.47
TBC1D1-218ENST00000513936 VPS8Q8N3P4 1428 aa12.13□□□□□ -0.47
TBC1D1-218ENST00000513936 TOP2BQ02880 1626 aa12.13□□□□□ -0.47
TBC1D1-218ENST00000513936 NCAPD3P42695 1498 aa12.13□□□□□ -0.47
TBC1D1-218ENST00000513936 CLSPNQ9HAW4 1339 aa12.12□□□□□ -0.47
TBC1D1-218ENST00000513936 CLIP1P30622 1438 aa12.12□□□□□ -0.47
TBC1D1-218ENST00000513936 SYNJ1O43426 1573 aa12.12□□□□□ -0.47
TBC1D1-218ENST00000513936 BIVM-ERCC5R4GMW8 1640 aa12.1□□□□□ -0.47
TBC1D1-218ENST00000513936 RUSC2Q8N2Y8 1516 aa12.09□□□□□ -0.47
TBC1D1-218ENST00000513936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.08□□□□□ -0.48
TBC1D1-218ENST00000513936 CENPBP07199 599 aaPredicted RBP12.08□□□□□ -0.48
TBC1D1-218ENST00000513936 APLP2Q06481 763 aa12.07□□□□□ -0.48
TBC1D1-218ENST00000513936 PABPN1Q86U42 306 aaKnown RBP eCLIP12.07□□□□□ -0.48
TBC1D1-218ENST00000513936 EHMT2Q96KQ7 1210 aa12.05□□□□□ -0.48
TBC1D1-218ENST00000513936 PRXQ9BXM0 1461 aa12.05□□□□□ -0.48
TBC1D1-218ENST00000513936 PLPPR3Q6T4P5 718 aa12.04□□□□□ -0.48
TBC1D1-218ENST00000513936 DIEXFQ68CQ4 756 aaKnown RBP12.03□□□□□ -0.48
TBC1D1-218ENST00000513936 ZNF316A6NFI3 1004 aaPredicted RBP12.01□□□□□ -0.49
TBC1D1-218ENST00000513936 ACIN1Q9UKV3 1341 aaKnown RBP12□□□□□ -0.49
TBC1D1-218ENST00000513936 KIF27Q86VH2 1401 aa12□□□□□ -0.49
TBC1D1-218ENST00000513936 CFTRP13569 1480 aa12□□□□□ -0.49
TBC1D1-218ENST00000513936 RAPGEF2Q9Y4G8 1499 aa11.99□□□□□ -0.49
TBC1D1-218ENST00000513936 SCAF1Q9H7N4 1312 aaKnown RBP11.94□□□□□ -0.5
TBC1D1-218ENST00000513936 MAP3K1Q13233 1512 aa11.94□□□□□ -0.5
TBC1D1-218ENST00000513936 CUX2O14529 1486 aa11.9□□□□□ -0.5
TBC1D1-218ENST00000513936 RRBP1Q9P2E9 1410 aaKnown RBP11.9□□□□□ -0.5
TBC1D1-218ENST00000513936 PRDM2Q13029 1718 aa11.89□□□□□ -0.51
TBC1D1-218ENST00000513936 CUX1P39880 1505 aa11.89□□□□□ -0.51
TBC1D1-218ENST00000513936 ARAP1Q96P48 1450 aa11.86□□□□□ -0.51
TBC1D1-218ENST00000513936 MYT1Q01538 1121 aa11.83□□□□□ -0.52
TBC1D1-218ENST00000513936 CADPSQ9ULU8 1353 aa11.82□□□□□ -0.52
TBC1D1-218ENST00000513936 NEUROD1Q13562 356 aa11.81□□□□□ -0.52
TBC1D1-218ENST00000513936 FHAD1B1AJZ9 1412 aa11.8□□□□□ -0.52
TBC1D1-218ENST00000513936 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
TBC1D1-218ENST00000513936 TIMELESSQ9UNS1 1208 aa11.79□□□□□ -0.52
TBC1D1-218ENST00000513936 DHX57Q6P158 1386 aaKnown RBP11.79□□□□□ -0.52
TBC1D1-218ENST00000513936 CCNB3Q8WWL7 1395 aa11.79□□□□□ -0.52
TBC1D1-218ENST00000513936 ARHGAP35Q9NRY4 1499 aa11.78□□□□□ -0.52
TBC1D1-218ENST00000513936 IGF1RP08069 1367 aa11.78□□□□□ -0.52
TBC1D1-218ENST00000513936 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.78□□□□□ -0.52
TBC1D1-218ENST00000513936 TTBK1Q5TCY1 1321 aaPredicted RBP11.75□□□□□ -0.53
TBC1D1-218ENST00000513936 AQRO60306 1485 aaKnown RBP eCLIP11.73□□□□□ -0.53
TBC1D1-218ENST00000513936 CARMIL1Q5VZK9 1371 aa11.73□□□□□ -0.53
TBC1D1-218ENST00000513936 GTF3C3Q9Y5Q9 886 aa11.73□□□□□ -0.53
TBC1D1-218ENST00000513936 EFCAB5A4FU69 1503 aa11.72□□□□□ -0.53
TBC1D1-218ENST00000513936 TIAM1Q13009 1591 aa11.71□□□□□ -0.53
TBC1D1-218ENST00000513936 CC2D2AQ9P2K1 1620 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms