RNA–Protein interactions for RNA: ENST00000513795.1

SPDL1-212, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 3

Gene SPDL1, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-212ENST00000513795 AEBP2Q6ZN18 517 aaPredicted RBP24.54■■□□□ 1.52
SPDL1-212ENST00000513795 CHIC1Q5VXU3 224 aa23.49■■□□□ 1.35
SPDL1-212ENST00000513795 SENP3Q9H4L4 574 aaPredicted RBP20.91■□□□□ 0.94
SPDL1-212ENST00000513795 PHF23Q9BUL5 403 aaPredicted RBP20.67■□□□□ 0.9
SPDL1-212ENST00000513795 NISCHQ9Y2I1 1504 aa19.94■□□□□ 0.78
SPDL1-212ENST00000513795 FOXD1Q16676 465 aa19.47■□□□□ 0.71
SPDL1-212ENST00000513795 PLPPR3Q6T4P5 718 aa18.85■□□□□ 0.61
SPDL1-212ENST00000513795 PPP6R1Q9UPN7 881 aa18.34■□□□□ 0.53
SPDL1-212ENST00000513795 ADRA2BP18089 450 aa18.29■□□□□ 0.52
SPDL1-212ENST00000513795 PIAS4Q8N2W9 510 aaPredicted RBP18.22■□□□□ 0.51
SPDL1-212ENST00000513795 MSH5O43196 834 aa18.15■□□□□ 0.5
SPDL1-212ENST00000513795 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
SPDL1-212ENST00000513795 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
SPDL1-212ENST00000513795 ABCC9O60706 1549 aa16.76■□□□□ 0.27
SPDL1-212ENST00000513795 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
SPDL1-212ENST00000513795 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
SPDL1-212ENST00000513795 ZCCHC6Q5VYS8 1495 aaKnown RBP16.71■□□□□ 0.27
SPDL1-212ENST00000513795 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
SPDL1-212ENST00000513795 PPP4R3CPQ6ZMV5 832 aa16.54■□□□□ 0.24
SPDL1-212ENST00000513795 DCAF8L2P0C7V8 631 aa16.5■□□□□ 0.23
SPDL1-212ENST00000513795 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
SPDL1-212ENST00000513795 MYO15BQ96JP2 1530 aa16.33■□□□□ 0.2
SPDL1-212ENST00000513795 NACADO15069 1562 aa16.3■□□□□ 0.2
SPDL1-212ENST00000513795 RB1CC1Q8TDY2 1594 aa16.21■□□□□ 0.19
SPDL1-212ENST00000513795 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
SPDL1-212ENST00000513795 SHROOM4Q9ULL8 1493 aa16.14■□□□□ 0.17
SPDL1-212ENST00000513795 HOXD11P31277 338 aaPredicted RBP16.07■□□□□ 0.16
SPDL1-212ENST00000513795 SCRIBQ14160 1630 aa16.07■□□□□ 0.16
SPDL1-212ENST00000513795 RNF216Q9NWF9 866 aaPredicted RBP16■□□□□ 0.15
SPDL1-212ENST00000513795 UNC13AQ9UPW8 1703 aa15.98■□□□□ 0.15
SPDL1-212ENST00000513795 NCBP3Q53F19 620 aaKnown RBP15.97■□□□□ 0.15
SPDL1-212ENST00000513795 DCAF8L1A6NGE4 600 aa15.91■□□□□ 0.14
SPDL1-212ENST00000513795 BICRAQ9NZM4 1560 aa15.83■□□□□ 0.13
SPDL1-212ENST00000513795 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
SPDL1-212ENST00000513795 NPM3O75607 178 aaKnown RBP15.73■□□□□ 0.11
SPDL1-212ENST00000513795 KCNA4P22459 653 aa15.59■□□□□ 0.09
SPDL1-212ENST00000513795 CECR2Q9BXF3 1484 aa15.57■□□□□ 0.08
SPDL1-212ENST00000513795 RNF39Q9H2S5 420 aa15.5■□□□□ 0.07
SPDL1-212ENST00000513795 DNAJC5BQ9UF47 199 aa15.49■□□□□ 0.07
SPDL1-212ENST00000513795 CACNB1Q02641 598 aaPredicted RBP15.46■□□□□ 0.07
SPDL1-212ENST00000513795 MROH2BQ7Z745 1585 aa15.44■□□□□ 0.06
SPDL1-212ENST00000513795 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
SPDL1-212ENST00000513795 SMARCA4P51532 1647 aa15.39■□□□□ 0.05
SPDL1-212ENST00000513795 BAZ1AQ9NRL2 1556 aaPredicted RBP15.37■□□□□ 0.05
SPDL1-212ENST00000513795 SUPT5HO00267 1087 aaKnown RBP15.37■□□□□ 0.05
SPDL1-212ENST00000513795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.32■□□□□ 0.04
SPDL1-212ENST00000513795 EIF4G1Q04637 1599 aaKnown RBP15.32■□□□□ 0.04
SPDL1-212ENST00000513795 WIZO95785 1651 aa15.3■□□□□ 0.04
SPDL1-212ENST00000513795 C1QBPQ07021 282 aaKnown RBP15.3■□□□□ 0.04
SPDL1-212ENST00000513795 PEG3Q9GZU2 1588 aa15.19■□□□□ 0.02
SPDL1-212ENST00000513795 ATAD2BQ9ULI0 1458 aa15.19■□□□□ 0.02
SPDL1-212ENST00000513795 CC2D2AQ9P2K1 1620 aa15.16■□□□□ 0.02
SPDL1-212ENST00000513795 SMARCA2P51531 1590 aa15.12■□□□□ 0.01
SPDL1-212ENST00000513795 TOP2AP11388 1531 aaKnown RBP15.09■□□□□ 0.01
SPDL1-212ENST00000513795 NCAPD3P42695 1498 aa15.08■□□□□ 0
SPDL1-212ENST00000513795 BAZ1BQ9UIG0 1483 aaKnown RBP15.05■□□□□ -0
SPDL1-212ENST00000513795 HMGXB3Q12766 1538 aa15.02■□□□□ -0
SPDL1-212ENST00000513795 U3KPZ7 1027 aaPredicted RBP15.01□□□□□ -0.01
SPDL1-212ENST00000513795 SLC4A2P04920 1241 aa14.98□□□□□ -0.01
SPDL1-212ENST00000513795 CCDC88BA6NC98 1476 aa14.95□□□□□ -0.02
SPDL1-212ENST00000513795 SLC4A1APQ9BWU0 796 aaKnown RBP14.75□□□□□ -0.05
SPDL1-212ENST00000513795 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
SPDL1-212ENST00000513795 CAPN15O75808 1086 aa14.7□□□□□ -0.06
SPDL1-212ENST00000513795 NESP48681 1621 aa14.68□□□□□ -0.06
SPDL1-212ENST00000513795 CFTRP13569 1480 aa14.68□□□□□ -0.06
SPDL1-212ENST00000513795 CADPSQ9ULU8 1353 aa14.66□□□□□ -0.06
SPDL1-212ENST00000513795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.66□□□□□ -0.06
SPDL1-212ENST00000513795 HNRNPUL2Q1KMD3 747 aaKnown RBP14.66□□□□□ -0.06
SPDL1-212ENST00000513795 APLP2Q06481 763 aa14.62□□□□□ -0.07
SPDL1-212ENST00000513795 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
SPDL1-212ENST00000513795 PRDM2Q13029 1718 aa14.59□□□□□ -0.07
SPDL1-212ENST00000513795 DSG3P32926 999 aa14.58□□□□□ -0.08
SPDL1-212ENST00000513795 SAMD1Q6SPF0 538 aaPredicted RBP14.58□□□□□ -0.08
SPDL1-212ENST00000513795 LAMC3Q9Y6N6 1575 aa14.58□□□□□ -0.08
SPDL1-212ENST00000513795 MYCNP04198 464 aaPredicted RBP14.54□□□□□ -0.08
SPDL1-212ENST00000513795 TRHP20396 242 aaPredicted RBP14.51□□□□□ -0.09
SPDL1-212ENST00000513795 FANCD2Q9BXW9 1451 aa14.5□□□□□ -0.09
SPDL1-212ENST00000513795 FOXD4L1Q9NU39 408 aa14.49□□□□□ -0.09
SPDL1-212ENST00000513795 ZNF219Q9P2Y4 722 aaPredicted RBP14.49□□□□□ -0.09
SPDL1-212ENST00000513795 KIF21AQ7Z4S6 1674 aa14.49□□□□□ -0.09
SPDL1-212ENST00000513795 SYNJ1O43426 1573 aa14.47□□□□□ -0.09
SPDL1-212ENST00000513795 WRNQ14191 1432 aaPredicted RBP eCLIP14.46□□□□□ -0.09
SPDL1-212ENST00000513795 PDS5BQ9NTI5 1447 aa14.44□□□□□ -0.1
SPDL1-212ENST00000513795 CUX1P39880 1505 aa14.44□□□□□ -0.1
SPDL1-212ENST00000513795 TRIM41Q8WV44 630 aa14.43□□□□□ -0.1
SPDL1-212ENST00000513795 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
SPDL1-212ENST00000513795 TOP2BQ02880 1626 aa14.39□□□□□ -0.11
SPDL1-212ENST00000513795 BIVM-ERCC5R4GMW8 1640 aa14.39□□□□□ -0.11
SPDL1-212ENST00000513795 URB2Q14146 1524 aaKnown RBP14.38□□□□□ -0.11
SPDL1-212ENST00000513795 ABCB7O75027 752 aa14.37□□□□□ -0.11
SPDL1-212ENST00000513795 TOPBP1Q92547 1522 aa14.35□□□□□ -0.11
SPDL1-212ENST00000513795 DNMBPQ6XZF7 1577 aa14.34□□□□□ -0.11
SPDL1-212ENST00000513795 ZBTB22O15209 634 aa14.33□□□□□ -0.12
SPDL1-212ENST00000513795 ERCC6Q03468 1493 aa14.31□□□□□ -0.12
SPDL1-212ENST00000513795 MRC2Q9UBG0 1479 aa14.31□□□□□ -0.12
SPDL1-212ENST00000513795 THOC2Q8NI27 1593 aaKnown RBP14.3□□□□□ -0.12
SPDL1-212ENST00000513795 FGD5Q6ZNL6 1462 aa14.3□□□□□ -0.12
SPDL1-212ENST00000513795 WDR62O43379 1518 aa14.26□□□□□ -0.13
SPDL1-212ENST00000513795 RUSC2Q8N2Y8 1516 aa14.26□□□□□ -0.13
SPDL1-212ENST00000513795 SOGA1O94964 1423 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms