RNA–Protein interactions for RNA: ENST00000512385.5

SNCAIP-217, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-217ENST00000512385 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
SNCAIP-217ENST00000512385 CCDC180Q9P1Z9 1646 aa25.54■■□□□ 1.68
SNCAIP-217ENST00000512385 DCAF8L2P0C7V8 631 aa25.18■■□□□ 1.62
SNCAIP-217ENST00000512385 ZCCHC6Q5VYS8 1495 aaKnown RBP24.86■■□□□ 1.57
SNCAIP-217ENST00000512385 SHROOM4Q9ULL8 1493 aa24.82■■□□□ 1.56
SNCAIP-217ENST00000512385 ABCC9O60706 1549 aa24.81■■□□□ 1.56
SNCAIP-217ENST00000512385 DCAF1Q9Y4B6 1507 aa24.2■■□□□ 1.46
SNCAIP-217ENST00000512385 SCRIBQ14160 1630 aa23.98■■□□□ 1.43
SNCAIP-217ENST00000512385 NACADO15069 1562 aa23.91■■□□□ 1.42
SNCAIP-217ENST00000512385 MYO15BQ96JP2 1530 aa23.85■■□□□ 1.41
SNCAIP-217ENST00000512385 SUPT5HO00267 1087 aaKnown RBP23.85■■□□□ 1.41
SNCAIP-217ENST00000512385 RB1CC1Q8TDY2 1594 aa23.77■■□□□ 1.4
SNCAIP-217ENST00000512385 PABPN1Q86U42 306 aaKnown RBP eCLIP23.6■■□□□ 1.37
SNCAIP-217ENST00000512385 UNC13AQ9UPW8 1703 aa23.4■■□□□ 1.34
SNCAIP-217ENST00000512385 CECR2Q9BXF3 1484 aa23.33■■□□□ 1.32
SNCAIP-217ENST00000512385 HRCP23327 699 aa23.24■■□□□ 1.31
SNCAIP-217ENST00000512385 BICRAQ9NZM4 1560 aa23.21■■□□□ 1.31
SNCAIP-217ENST00000512385 RSF1Q96T23 1441 aaPredicted RBP23.14■■□□□ 1.29
SNCAIP-217ENST00000512385 MROH2BQ7Z745 1585 aa23.08■■□□□ 1.29
SNCAIP-217ENST00000512385 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
SNCAIP-217ENST00000512385 PCGF6Q9BYE7 350 aa23.03■■□□□ 1.28
SNCAIP-217ENST00000512385 WIZO95785 1651 aa22.89■■□□□ 1.25
SNCAIP-217ENST00000512385 BAZ1AQ9NRL2 1556 aaPredicted RBP22.82■■□□□ 1.24
SNCAIP-217ENST00000512385 CHIC1Q5VXU3 224 aa22.79■■□□□ 1.24
SNCAIP-217ENST00000512385 SMARCA4P51532 1647 aa22.78■■□□□ 1.24
SNCAIP-217ENST00000512385 EIF4G1Q04637 1599 aaKnown RBP22.51■■□□□ 1.19
SNCAIP-217ENST00000512385 ATAD2BQ9ULI0 1458 aa22.49■■□□□ 1.19
SNCAIP-217ENST00000512385 LOC105371045A0A1W2PR82 267 aa22.45■■□□□ 1.19
SNCAIP-217ENST00000512385 TOP2AP11388 1531 aaKnown RBP22.42■■□□□ 1.18
SNCAIP-217ENST00000512385 CCDC88BA6NC98 1476 aa22.4■■□□□ 1.18
SNCAIP-217ENST00000512385 BAZ1BQ9UIG0 1483 aaKnown RBP22.36■■□□□ 1.17
SNCAIP-217ENST00000512385 PEG3Q9GZU2 1588 aa22.31■■□□□ 1.16
SNCAIP-217ENST00000512385 SMARCA2P51531 1590 aa22.31■■□□□ 1.16
SNCAIP-217ENST00000512385 DNAJC5BQ9UF47 199 aa22.25■■□□□ 1.15
SNCAIP-217ENST00000512385 CC2D2AQ9P2K1 1620 aa22.23■■□□□ 1.15
SNCAIP-217ENST00000512385 TRIM41Q8WV44 630 aa22.19■■□□□ 1.14
SNCAIP-217ENST00000512385 NCAPD3P42695 1498 aa22.18■■□□□ 1.14
SNCAIP-217ENST00000512385 FAM9AQ8IZU1 332 aaPredicted RBP22.12■■□□□ 1.13
SNCAIP-217ENST00000512385 TRIM26Q12899 539 aaPredicted RBP22.08■■□□□ 1.13
SNCAIP-217ENST00000512385 ABCC8Q09428 1581 aa22.07■■□□□ 1.12
SNCAIP-217ENST00000512385 EHMT2Q96KQ7 1210 aa22.07■■□□□ 1.12
SNCAIP-217ENST00000512385 SCAF1Q9H7N4 1312 aaKnown RBP22.05■■□□□ 1.12
SNCAIP-217ENST00000512385 HMGXB3Q12766 1538 aa22.04■■□□□ 1.12
SNCAIP-217ENST00000512385 PELP1Q8IZL8 1130 aaKnown RBP21.91■■□□□ 1.1
SNCAIP-217ENST00000512385 NESP48681 1621 aa21.8■■□□□ 1.08
SNCAIP-217ENST00000512385 WRNQ14191 1432 aaPredicted RBP eCLIP21.75■■□□□ 1.07
SNCAIP-217ENST00000512385 CFTRP13569 1480 aa21.74■■□□□ 1.07
SNCAIP-217ENST00000512385 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
SNCAIP-217ENST00000512385 SYNJ1O43426 1573 aa21.69■■□□□ 1.06
SNCAIP-217ENST00000512385 SOGA1O94964 1423 aa21.69■■□□□ 1.06
SNCAIP-217ENST00000512385 ZEB1P37275 1124 aaPredicted RBP21.68■■□□□ 1.06
SNCAIP-217ENST00000512385 RUSC2Q8N2Y8 1516 aa21.66■■□□□ 1.06
SNCAIP-217ENST00000512385 CUX1P39880 1505 aa21.53■■□□□ 1.04
SNCAIP-217ENST00000512385 FANCD2Q9BXW9 1451 aa21.52■■□□□ 1.04
SNCAIP-217ENST00000512385 NEUROD1Q13562 356 aa21.51■■□□□ 1.03
SNCAIP-217ENST00000512385 TOP2BQ02880 1626 aa21.43■■□□□ 1.02
SNCAIP-217ENST00000512385 CSRNP3Q8WYN3 585 aa21.42■■□□□ 1.02
SNCAIP-217ENST00000512385 ACIN1Q9UKV3 1341 aaKnown RBP21.42■■□□□ 1.02
SNCAIP-217ENST00000512385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.41■■□□□ 1.02
SNCAIP-217ENST00000512385 GTF3C3Q9Y5Q9 886 aa21.36■■□□□ 1.01
SNCAIP-217ENST00000512385 LAMC3Q9Y6N6 1575 aa21.35■■□□□ 1.01
SNCAIP-217ENST00000512385 PRDM2Q13029 1718 aa21.35■■□□□ 1.01
SNCAIP-217ENST00000512385 RANGAP1P46060 587 aaPredicted RBP21.34■■□□□ 1.01
SNCAIP-217ENST00000512385 BIVM-ERCC5R4GMW8 1640 aa21.32■■□□□ 1
SNCAIP-217ENST00000512385 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
SNCAIP-217ENST00000512385 UBTFP17480 764 aaKnown RBP21.32■■□□□ 1
SNCAIP-217ENST00000512385 FGD5Q6ZNL6 1462 aa21.31■■□□□ 1
SNCAIP-217ENST00000512385 PDS5BQ9NTI5 1447 aa21.31■■□□□ 1
SNCAIP-217ENST00000512385 RAD54L2Q9Y4B4 1467 aa21.3■■□□□ 1
SNCAIP-217ENST00000512385 KIF21AQ7Z4S6 1674 aa21.3■■□□□ 1
SNCAIP-217ENST00000512385 URB2Q14146 1524 aaKnown RBP21.29■■□□□ 1
SNCAIP-217ENST00000512385 TOPBP1Q92547 1522 aa21.26■□□□□ 0.99
SNCAIP-217ENST00000512385 CCER1Q8TC90 406 aaPredicted RBP21.25■□□□□ 0.99
SNCAIP-217ENST00000512385 CUX2O14529 1486 aa21.22■□□□□ 0.99
SNCAIP-217ENST00000512385 POLA1P09884 1462 aaPredicted RBP21.2■□□□□ 0.98
SNCAIP-217ENST00000512385 TTBK1Q5TCY1 1321 aaPredicted RBP21.2■□□□□ 0.98
SNCAIP-217ENST00000512385 DIEXFQ68CQ4 756 aaKnown RBP21.17■□□□□ 0.98
SNCAIP-217ENST00000512385 RAPGEF2Q9Y4G8 1499 aa21.17■□□□□ 0.98
SNCAIP-217ENST00000512385 DNMBPQ6XZF7 1577 aa21.16■□□□□ 0.98
SNCAIP-217ENST00000512385 TDRD9Q8NDG6 1382 aaKnown RBP21.15■□□□□ 0.98
SNCAIP-217ENST00000512385 ERCC6Q03468 1493 aa21.15■□□□□ 0.98
SNCAIP-217ENST00000512385 EEA1Q15075 1411 aa21.15■□□□□ 0.98
SNCAIP-217ENST00000512385 KIF27Q86VH2 1401 aa21.14■□□□□ 0.97
SNCAIP-217ENST00000512385 IGF1RP08069 1367 aa21.07■□□□□ 0.96
SNCAIP-217ENST00000512385 GOLGA3Q08378 1498 aa21.05■□□□□ 0.96
SNCAIP-217ENST00000512385 CENPBP07199 599 aaPredicted RBP21.05■□□□□ 0.96
SNCAIP-217ENST00000512385 YTHDC1Q96MU7 727 aaKnown RBP21.03■□□□□ 0.96
SNCAIP-217ENST00000512385 MRC2Q9UBG0 1479 aa21.03■□□□□ 0.96
SNCAIP-217ENST00000512385 CEP162Q5TB80 1403 aa21.02■□□□□ 0.96
SNCAIP-217ENST00000512385 TNIKQ9UKE5 1360 aa21■□□□□ 0.95
SNCAIP-217ENST00000512385 PRXQ9BXM0 1461 aa20.99■□□□□ 0.95
SNCAIP-217ENST00000512385 AQRO60306 1485 aaKnown RBP eCLIP20.98■□□□□ 0.95
SNCAIP-217ENST00000512385 ABCA10Q8WWZ4 1543 aa20.97■□□□□ 0.95
SNCAIP-217ENST00000512385 CARMIL1Q5VZK9 1371 aa20.95■□□□□ 0.95
SNCAIP-217ENST00000512385 KIF21BO75037 1637 aa20.94■□□□□ 0.94
SNCAIP-217ENST00000512385 ZNF608Q9ULD9 1512 aaPredicted RBP20.93■□□□□ 0.94
SNCAIP-217ENST00000512385 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
SNCAIP-217ENST00000512385 MYT1Q01538 1121 aa20.87■□□□□ 0.93
SNCAIP-217ENST00000512385 TARBP1Q13395 1621 aaKnown RBP20.87■□□□□ 0.93
SNCAIP-217ENST00000512385 WDR62O43379 1518 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms