RNA–Protein interactions for RNA: ENST00000512349.1

AC034238.3-201, humanhuman

TSL 4 BASIC

Gene AC034238.3, Length 591 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC034238.3-201ENST00000512349 AEBP2Q6ZN18 517 aaPredicted RBP16.36■□□□□ 0.21
AC034238.3-201ENST00000512349 CHIC1Q5VXU3 224 aa15.43■□□□□ 0.06
AC034238.3-201ENST00000512349 SENP3Q9H4L4 574 aaPredicted RBP14.04□□□□□ -0.16
AC034238.3-201ENST00000512349 POTEDQ86YR6 584 aa13.97□□□□□ -0.17
AC034238.3-201ENST00000512349 NISCHQ9Y2I1 1504 aa13.86□□□□□ -0.19
AC034238.3-201ENST00000512349 PHF23Q9BUL5 403 aaPredicted RBP13.73□□□□□ -0.21
AC034238.3-201ENST00000512349 FOXD1Q16676 465 aa13.22□□□□□ -0.29
AC034238.3-201ENST00000512349 MSH5O43196 834 aa12.7□□□□□ -0.38
AC034238.3-201ENST00000512349 PLPPR3Q6T4P5 718 aa12.5□□□□□ -0.41
AC034238.3-201ENST00000512349 CCDC180Q9P1Z9 1646 aa12.38□□□□□ -0.43
AC034238.3-201ENST00000512349 ABCC9O60706 1549 aa12.23□□□□□ -0.45
AC034238.3-201ENST00000512349 PIAS4Q8N2W9 510 aaPredicted RBP12.09□□□□□ -0.47
AC034238.3-201ENST00000512349 ADRA2BP18089 450 aa11.95□□□□□ -0.5
AC034238.3-201ENST00000512349 PPP6R1Q9UPN7 881 aa11.94□□□□□ -0.5
AC034238.3-201ENST00000512349 DCAF8L2P0C7V8 631 aa11.7□□□□□ -0.54
AC034238.3-201ENST00000512349 RB1CC1Q8TDY2 1594 aa11.69□□□□□ -0.54
AC034238.3-201ENST00000512349 NACADO15069 1562 aa11.63□□□□□ -0.55
AC034238.3-201ENST00000512349 ZCCHC6Q5VYS8 1495 aaKnown RBP11.52□□□□□ -0.56
AC034238.3-201ENST00000512349 MYO15BQ96JP2 1530 aa11.49□□□□□ -0.57
AC034238.3-201ENST00000512349 UNC13AQ9UPW8 1703 aa11.49□□□□□ -0.57
AC034238.3-201ENST00000512349 DCAF1Q9Y4B6 1507 aa11.42□□□□□ -0.58
AC034238.3-201ENST00000512349 PABPN1Q86U42 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
AC034238.3-201ENST00000512349 CACNB1Q02641 598 aaPredicted RBP11.41□□□□□ -0.58
AC034238.3-201ENST00000512349 SCRIBQ14160 1630 aa11.34□□□□□ -0.59
AC034238.3-201ENST00000512349 BICRAQ9NZM4 1560 aa11.33□□□□□ -0.6
AC034238.3-201ENST00000512349 DNAJC5BQ9UF47 199 aa11.27□□□□□ -0.61
AC034238.3-201ENST00000512349 SHROOM4Q9ULL8 1493 aa11.15□□□□□ -0.62
AC034238.3-201ENST00000512349 SCAF1Q9H7N4 1312 aaKnown RBP11.1□□□□□ -0.63
AC034238.3-201ENST00000512349 EIF4G1Q04637 1599 aaKnown RBP11.05□□□□□ -0.64
AC034238.3-201ENST00000512349 CC2D2AQ9P2K1 1620 aa11.05□□□□□ -0.64
AC034238.3-201ENST00000512349 DMRT2Q9Y5R5 561 aa11.01□□□□□ -0.65
AC034238.3-201ENST00000512349 CECR2Q9BXF3 1484 aa10.97□□□□□ -0.65
AC034238.3-201ENST00000512349 PPP4R3CPQ6ZMV5 832 aa10.93□□□□□ -0.66
AC034238.3-201ENST00000512349 MAPK8IP2Q13387 824 aaPredicted RBP10.89□□□□□ -0.67
AC034238.3-201ENST00000512349 SMARCA4P51532 1647 aa10.8□□□□□ -0.68
AC034238.3-201ENST00000512349 RNF39Q9H2S5 420 aa10.79□□□□□ -0.68
AC034238.3-201ENST00000512349 BAZ1AQ9NRL2 1556 aaPredicted RBP10.76□□□□□ -0.69
AC034238.3-201ENST00000512349 POTEHQ6S545 545 aa10.75□□□□□ -0.69
AC034238.3-201ENST00000512349 ATAD2BQ9ULI0 1458 aa10.74□□□□□ -0.69
AC034238.3-201ENST00000512349 SMARCA2P51531 1590 aa10.72□□□□□ -0.69
AC034238.3-201ENST00000512349 NCAPD3P42695 1498 aa10.71□□□□□ -0.69
AC034238.3-201ENST00000512349 MROH2BQ7Z745 1585 aa10.71□□□□□ -0.69
AC034238.3-201ENST00000512349 CNKSR2Q8WXI2 1034 aa10.71□□□□□ -0.69
AC034238.3-201ENST00000512349 NCBP3Q53F19 620 aaKnown RBP10.68□□□□□ -0.7
AC034238.3-201ENST00000512349 HMGXB3Q12766 1538 aa10.67□□□□□ -0.7
AC034238.3-201ENST00000512349 BAZ1BQ9UIG0 1483 aaKnown RBP10.67□□□□□ -0.7
AC034238.3-201ENST00000512349 PEG3Q9GZU2 1588 aa10.65□□□□□ -0.71
AC034238.3-201ENST00000512349 WIZO95785 1651 aa10.62□□□□□ -0.71
AC034238.3-201ENST00000512349 RNF216Q9NWF9 866 aaPredicted RBP10.57□□□□□ -0.72
AC034238.3-201ENST00000512349 NESP48681 1621 aa10.55□□□□□ -0.72
AC034238.3-201ENST00000512349 HOXD11P31277 338 aaPredicted RBP10.55□□□□□ -0.72
AC034238.3-201ENST00000512349 ERCC6Q03468 1493 aa10.55□□□□□ -0.72
AC034238.3-201ENST00000512349 C1QBPQ07021 282 aaKnown RBP10.54□□□□□ -0.72
AC034238.3-201ENST00000512349 RSF1Q96T23 1441 aaPredicted RBP10.53□□□□□ -0.72
AC034238.3-201ENST00000512349 DCAF8L1A6NGE4 600 aa10.49□□□□□ -0.73
AC034238.3-201ENST00000512349 LAMC3Q9Y6N6 1575 aa10.48□□□□□ -0.73
AC034238.3-201ENST00000512349 TOP2AP11388 1531 aaKnown RBP10.46□□□□□ -0.74
AC034238.3-201ENST00000512349 KIF21AQ7Z4S6 1674 aa10.45□□□□□ -0.74
AC034238.3-201ENST00000512349 CADPSQ9ULU8 1353 aa10.41□□□□□ -0.74
AC034238.3-201ENST00000512349 NPM3O75607 178 aaKnown RBP10.41□□□□□ -0.74
AC034238.3-201ENST00000512349 CUX2O14529 1486 aa10.41□□□□□ -0.74
AC034238.3-201ENST00000512349 PDS5BQ9NTI5 1447 aa10.4□□□□□ -0.75
AC034238.3-201ENST00000512349 THOC2Q8NI27 1593 aaKnown RBP10.39□□□□□ -0.75
AC034238.3-201ENST00000512349 KCNA4P22459 653 aa10.38□□□□□ -0.75
AC034238.3-201ENST00000512349 CCDC88BA6NC98 1476 aa10.34□□□□□ -0.75
AC034238.3-201ENST00000512349 CFTRP13569 1480 aa10.33□□□□□ -0.76
AC034238.3-201ENST00000512349 PRDM2Q13029 1718 aa10.33□□□□□ -0.76
AC034238.3-201ENST00000512349 FANCD2Q9BXW9 1451 aa10.32□□□□□ -0.76
AC034238.3-201ENST00000512349 MRC2Q9UBG0 1479 aa10.32□□□□□ -0.76
AC034238.3-201ENST00000512349 CEP164Q9UPV0 1460 aa10.32□□□□□ -0.76
AC034238.3-201ENST00000512349 SUPT5HO00267 1087 aaKnown RBP10.28□□□□□ -0.76
AC034238.3-201ENST00000512349 WDR62O43379 1518 aa10.28□□□□□ -0.76
AC034238.3-201ENST00000512349 URB2Q14146 1524 aaKnown RBP10.23□□□□□ -0.77
AC034238.3-201ENST00000512349 DNAJC5Q9H3Z4 198 aa10.19□□□□□ -0.78
AC034238.3-201ENST00000512349 TOPBP1Q92547 1522 aa10.15□□□□□ -0.78
AC034238.3-201ENST00000512349 DNMBPQ6XZF7 1577 aa10.14□□□□□ -0.79
AC034238.3-201ENST00000512349 ABCC8Q09428 1581 aa10.11□□□□□ -0.79
AC034238.3-201ENST00000512349 IFT140Q96RY7 1462 aa10.1□□□□□ -0.79
AC034238.3-201ENST00000512349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.09□□□□□ -0.79
AC034238.3-201ENST00000512349 ZNF608Q9ULD9 1512 aaPredicted RBP10.08□□□□□ -0.8
AC034238.3-201ENST00000512349 POLA1P09884 1462 aaPredicted RBP10.05□□□□□ -0.8
AC034238.3-201ENST00000512349 EIF4G3O43432 1585 aaKnown RBP10.05□□□□□ -0.8
AC034238.3-201ENST00000512349 TARBP1Q13395 1621 aaKnown RBP10.04□□□□□ -0.8
AC034238.3-201ENST00000512349 CUX1P39880 1505 aa10.04□□□□□ -0.8
AC034238.3-201ENST00000512349 FGD5Q6ZNL6 1462 aa10.04□□□□□ -0.8
AC034238.3-201ENST00000512349 RAD54L2Q9Y4B4 1467 aa10.04□□□□□ -0.8
AC034238.3-201ENST00000512349 SOGA1O94964 1423 aa10.01□□□□□ -0.81
AC034238.3-201ENST00000512349 AQRO60306 1485 aaKnown RBP eCLIP10.01□□□□□ -0.81
AC034238.3-201ENST00000512349 OSCARQ8IYS5 282 aa9.99□□□□□ -0.81
AC034238.3-201ENST00000512349 TDRD9Q8NDG6 1382 aaKnown RBP9.99□□□□□ -0.81
AC034238.3-201ENST00000512349 CHD1O14646 1710 aa9.98□□□□□ -0.81
AC034238.3-201ENST00000512349 WDR97A6NE52 1622 aa9.96□□□□□ -0.81
AC034238.3-201ENST00000512349 FBLN2P98095 1184 aa9.95□□□□□ -0.82
AC034238.3-201ENST00000512349 WRNQ14191 1432 aaPredicted RBP eCLIP9.95□□□□□ -0.82
AC034238.3-201ENST00000512349 SYNJ1O43426 1573 aa9.95□□□□□ -0.82
AC034238.3-201ENST00000512349 BIVM-ERCC5R4GMW8 1640 aa9.95□□□□□ -0.82
AC034238.3-201ENST00000512349 PBRM1Q86U86 1689 aa9.93□□□□□ -0.82
AC034238.3-201ENST00000512349 TOP2BQ02880 1626 aa9.93□□□□□ -0.82
AC034238.3-201ENST00000512349 SNAPC4Q5SXM2 1469 aa9.92□□□□□ -0.82
AC034238.3-201ENST00000512349 SLC4A1APQ9BWU0 796 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 204.5 ms