RNA–Protein interactions for RNA: ENST00000511232.5

WDR55-204, Transcript of WD repeat domain 55, humanhuman

TSL 2

Gene WDR55, Length 3,812 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR55-204ENST00000511232 NISCHQ9Y2I1 1504 aa20.3■□□□□ 0.84
WDR55-204ENST00000511232 DCAF8L2P0C7V8 631 aa19.01■□□□□ 0.63
WDR55-204ENST00000511232 SHROOM4Q9ULL8 1493 aa18.1■□□□□ 0.49
WDR55-204ENST00000511232 SUPT5HO00267 1087 aaKnown RBP17.79■□□□□ 0.44
WDR55-204ENST00000511232 ABCC9O60706 1549 aa17.46■□□□□ 0.39
WDR55-204ENST00000511232 CCDC180Q9P1Z9 1646 aa17.03■□□□□ 0.32
WDR55-204ENST00000511232 PABPN1Q86U42 306 aaKnown RBP eCLIP16.98■□□□□ 0.31
WDR55-204ENST00000511232 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
WDR55-204ENST00000511232 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
WDR55-204ENST00000511232 FAM9AQ8IZU1 332 aaPredicted RBP16.64■□□□□ 0.25
WDR55-204ENST00000511232 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
WDR55-204ENST00000511232 TRIM41Q8WV44 630 aa16.48■□□□□ 0.23
WDR55-204ENST00000511232 RB1CC1Q8TDY2 1594 aa16.37■□□□□ 0.21
WDR55-204ENST00000511232 NACADO15069 1562 aa16.33■□□□□ 0.2
WDR55-204ENST00000511232 CHIC1Q5VXU3 224 aa16.28■□□□□ 0.2
WDR55-204ENST00000511232 RANGAP1P46060 587 aaPredicted RBP16.24■□□□□ 0.19
WDR55-204ENST00000511232 DCAF1Q9Y4B6 1507 aa16.24■□□□□ 0.19
WDR55-204ENST00000511232 LOC105371045A0A1W2PR82 267 aa16.08■□□□□ 0.17
WDR55-204ENST00000511232 TTBK1Q5TCY1 1321 aaPredicted RBP16.08■□□□□ 0.16
WDR55-204ENST00000511232 UBTFP17480 764 aaKnown RBP16.07■□□□□ 0.16
WDR55-204ENST00000511232 CECR2Q9BXF3 1484 aa16.05■□□□□ 0.16
WDR55-204ENST00000511232 RSF1Q96T23 1441 aaPredicted RBP16.02■□□□□ 0.16
WDR55-204ENST00000511232 MYO15BQ96JP2 1530 aa15.94■□□□□ 0.14
WDR55-204ENST00000511232 APLP2Q06481 763 aa15.9■□□□□ 0.14
WDR55-204ENST00000511232 ATP1B4Q9UN42 357 aaPredicted RBP15.87■□□□□ 0.13
WDR55-204ENST00000511232 PPARGC1BQ86YN6 1023 aaKnown RBP15.86■□□□□ 0.13
WDR55-204ENST00000511232 MROH2BQ7Z745 1585 aa15.8■□□□□ 0.12
WDR55-204ENST00000511232 PCGF6Q9BYE7 350 aa15.8■□□□□ 0.12
WDR55-204ENST00000511232 BAZ1AQ9NRL2 1556 aaPredicted RBP15.76■□□□□ 0.11
WDR55-204ENST00000511232 BAZ1BQ9UIG0 1483 aaKnown RBP15.71■□□□□ 0.1
WDR55-204ENST00000511232 CSRNP3Q8WYN3 585 aa15.58■□□□□ 0.09
WDR55-204ENST00000511232 FBLN2P98095 1184 aa15.58■□□□□ 0.08
WDR55-204ENST00000511232 WIZO95785 1651 aa15.58■□□□□ 0.08
WDR55-204ENST00000511232 CCDC88BA6NC98 1476 aa15.5■□□□□ 0.07
WDR55-204ENST00000511232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
WDR55-204ENST00000511232 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
WDR55-204ENST00000511232 ATAD2BQ9ULI0 1458 aa15.48■□□□□ 0.07
WDR55-204ENST00000511232 SMARCA4P51532 1647 aa15.45■□□□□ 0.06
WDR55-204ENST00000511232 P3H3Q8IVL6 736 aa15.44■□□□□ 0.06
WDR55-204ENST00000511232 SMARCA2P51531 1590 aa15.42■□□□□ 0.06
WDR55-204ENST00000511232 WRNQ14191 1432 aaPredicted RBP eCLIP15.4■□□□□ 0.06
WDR55-204ENST00000511232 ITGAEP38570 1179 aa15.38■□□□□ 0.05
WDR55-204ENST00000511232 BICRAQ9NZM4 1560 aa15.36■□□□□ 0.05
WDR55-204ENST00000511232 TOP2AP11388 1531 aaKnown RBP15.34■□□□□ 0.05
WDR55-204ENST00000511232 TRIM26Q12899 539 aaPredicted RBP15.33■□□□□ 0.04
WDR55-204ENST00000511232 EIF4G1Q04637 1599 aaKnown RBP15.32■□□□□ 0.04
WDR55-204ENST00000511232 ARID3CA6NKF2 412 aa15.31■□□□□ 0.04
WDR55-204ENST00000511232 ABCC8Q09428 1581 aa15.3■□□□□ 0.04
WDR55-204ENST00000511232 CCER1Q8TC90 406 aaPredicted RBP15.29■□□□□ 0.04
WDR55-204ENST00000511232 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
WDR55-204ENST00000511232 CADPSQ9ULU8 1353 aa15.24■□□□□ 0.03
WDR55-204ENST00000511232 ERCC6Q03468 1493 aa15.23■□□□□ 0.03
WDR55-204ENST00000511232 HRCP23327 699 aa15.23■□□□□ 0.03
WDR55-204ENST00000511232 SOGA1O94964 1423 aa15.22■□□□□ 0.03
WDR55-204ENST00000511232 UNC13AQ9UPW8 1703 aa15.2■□□□□ 0.02
WDR55-204ENST00000511232 NCAPD3P42695 1498 aa15.2■□□□□ 0.02
WDR55-204ENST00000511232 CHMP7Q8WUX9 453 aaPredicted RBP15.17■□□□□ 0.02
WDR55-204ENST00000511232 PDS5BQ9NTI5 1447 aa15.12■□□□□ 0.01
WDR55-204ENST00000511232 CC2D2AQ9P2K1 1620 aa15.12■□□□□ 0.01
WDR55-204ENST00000511232 KIF27Q86VH2 1401 aa15.12■□□□□ 0.01
WDR55-204ENST00000511232 FAM50AQ14320 339 aaKnown RBP15.11■□□□□ 0.01
WDR55-204ENST00000511232 TDRD9Q8NDG6 1382 aaKnown RBP15.1■□□□□ 0.01
WDR55-204ENST00000511232 MYT1LQ9UL68 1186 aa15.09■□□□□ 0.01
WDR55-204ENST00000511232 CUX2O14529 1486 aa15.09■□□□□ 0.01
WDR55-204ENST00000511232 EEA1Q15075 1411 aa15.04■□□□□ -0
WDR55-204ENST00000511232 FANCD2Q9BXW9 1451 aa15.03■□□□□ -0
WDR55-204ENST00000511232 NESP48681 1621 aa15.03■□□□□ -0
WDR55-204ENST00000511232 CLIP1P30622 1438 aa15.01□□□□□ -0.01
WDR55-204ENST00000511232 RUSC2Q8N2Y8 1516 aa15.01□□□□□ -0.01
WDR55-204ENST00000511232 CARMIL1Q5VZK9 1371 aa14.99□□□□□ -0.01
WDR55-204ENST00000511232 GOLGA3Q08378 1498 aa14.99□□□□□ -0.01
WDR55-204ENST00000511232 CEP162Q5TB80 1403 aa14.98□□□□□ -0.01
WDR55-204ENST00000511232 CEP164Q9UPV0 1460 aa14.97□□□□□ -0.01
WDR55-204ENST00000511232 ZEB1P37275 1124 aaPredicted RBP14.93□□□□□ -0.02
WDR55-204ENST00000511232 TNIKQ9UKE5 1360 aa14.93□□□□□ -0.02
WDR55-204ENST00000511232 PELP1Q8IZL8 1130 aaKnown RBP14.92□□□□□ -0.02
WDR55-204ENST00000511232 ZNF777Q9ULD5 760 aaPredicted RBP14.92□□□□□ -0.02
WDR55-204ENST00000511232 CFTRP13569 1480 aa14.91□□□□□ -0.02
WDR55-204ENST00000511232 HMGXB3Q12766 1538 aa14.9□□□□□ -0.02
WDR55-204ENST00000511232 RAD54L2Q9Y4B4 1467 aa14.87□□□□□ -0.03
WDR55-204ENST00000511232 CDK11AQ9UQ88 783 aaPredicted RBP14.85□□□□□ -0.03
WDR55-204ENST00000511232 FGD5Q6ZNL6 1462 aa14.84□□□□□ -0.03
WDR55-204ENST00000511232 TRIM52Q96A61 297 aa14.83□□□□□ -0.03
WDR55-204ENST00000511232 RAPGEF2Q9Y4G8 1499 aa14.8□□□□□ -0.04
WDR55-204ENST00000511232 PEG3Q9GZU2 1588 aa14.79□□□□□ -0.04
WDR55-204ENST00000511232 KCNH8Q96L42 1107 aa14.78□□□□□ -0.04
WDR55-204ENST00000511232 MTUS2Q5JR59 1369 aa14.77□□□□□ -0.04
WDR55-204ENST00000511232 NPM1P06748 294 aaKnown RBP eCLIP14.77□□□□□ -0.04
WDR55-204ENST00000511232 CHIC2Q9UKJ5 165 aa14.76□□□□□ -0.05
WDR55-204ENST00000511232 IGF1RP08069 1367 aa14.76□□□□□ -0.05
WDR55-204ENST00000511232 SYNJ1O43426 1573 aa14.76□□□□□ -0.05
WDR55-204ENST00000511232 NEUROD1Q13562 356 aa14.76□□□□□ -0.05
WDR55-204ENST00000511232 AQRO60306 1485 aaKnown RBP eCLIP14.75□□□□□ -0.052e-11■■■■■ 45.6
WDR55-204ENST00000511232 CUX1P39880 1505 aa14.7□□□□□ -0.06
WDR55-204ENST00000511232 PLEKHD1A6NEE1 506 aa14.68□□□□□ -0.06
WDR55-204ENST00000511232 KANK4Q5T7N3 995 aaPredicted RBP14.68□□□□□ -0.06
WDR55-204ENST00000511232 GAPVD1Q14C86 1478 aa14.68□□□□□ -0.06
WDR55-204ENST00000511232 TOPBP1Q92547 1522 aa14.67□□□□□ -0.06
WDR55-204ENST00000511232 JPH4Q96JJ6 628 aa14.66□□□□□ -0.06
WDR55-204ENST00000511232 POLA1P09884 1462 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms