RNA–Protein interactions for RNA: ENST00000510003.5

SNCAIP-214, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,039 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-214ENST00000510003 NISCHQ9Y2I1 1504 aa28.79■■■□□ 2.2
SNCAIP-214ENST00000510003 CCDC180Q9P1Z9 1646 aa25.02■■□□□ 1.6
SNCAIP-214ENST00000510003 SHROOM4Q9ULL8 1493 aa24.66■■□□□ 1.54
SNCAIP-214ENST00000510003 ZCCHC6Q5VYS8 1495 aaKnown RBP24.5■■□□□ 1.51
SNCAIP-214ENST00000510003 SUPT5HO00267 1087 aaKnown RBP24.47■■□□□ 1.51
SNCAIP-214ENST00000510003 HRCP23327 699 aa24.44■■□□□ 1.5
SNCAIP-214ENST00000510003 ABCC9O60706 1549 aa24.27■■□□□ 1.48
SNCAIP-214ENST00000510003 MYO15BQ96JP2 1530 aa24.2■■□□□ 1.46
SNCAIP-214ENST00000510003 CHIC1Q5VXU3 224 aa24.19■■□□□ 1.46
SNCAIP-214ENST00000510003 DCAF1Q9Y4B6 1507 aa23.94■■□□□ 1.42
SNCAIP-214ENST00000510003 PCGF6Q9BYE7 350 aa23.9■■□□□ 1.42
SNCAIP-214ENST00000510003 DCAF8L2P0C7V8 631 aa23.79■■□□□ 1.4
SNCAIP-214ENST00000510003 PPARGC1BQ86YN6 1023 aaKnown RBP23.6■■□□□ 1.37
SNCAIP-214ENST00000510003 TRIM26Q12899 539 aaPredicted RBP23.49■■□□□ 1.35
SNCAIP-214ENST00000510003 NACADO15069 1562 aa23.47■■□□□ 1.35
SNCAIP-214ENST00000510003 RB1CC1Q8TDY2 1594 aa23.41■■□□□ 1.34
SNCAIP-214ENST00000510003 LOC105371045A0A1W2PR82 267 aa23.36■■□□□ 1.33
SNCAIP-214ENST00000510003 ZEB1P37275 1124 aaPredicted RBP23.34■■□□□ 1.33
SNCAIP-214ENST00000510003 PELP1Q8IZL8 1130 aaKnown RBP23.28■■□□□ 1.32
SNCAIP-214ENST00000510003 SCRIBQ14160 1630 aa22.97■■□□□ 1.27
SNCAIP-214ENST00000510003 RSF1Q96T23 1441 aaPredicted RBP22.96■■□□□ 1.27
SNCAIP-214ENST00000510003 UNC13AQ9UPW8 1703 aa22.93■■□□□ 1.26
SNCAIP-214ENST00000510003 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
SNCAIP-214ENST00000510003 PABPN1Q86U42 306 aaKnown RBP eCLIP22.82■■□□□ 1.24
SNCAIP-214ENST00000510003 SCAF1Q9H7N4 1312 aaKnown RBP22.77■■□□□ 1.24
SNCAIP-214ENST00000510003 BICRAQ9NZM4 1560 aa22.74■■□□□ 1.23
SNCAIP-214ENST00000510003 FAM9AQ8IZU1 332 aaPredicted RBP22.53■■□□□ 1.2
SNCAIP-214ENST00000510003 ACIN1Q9UKV3 1341 aaKnown RBP22.46■■□□□ 1.19
SNCAIP-214ENST00000510003 MYT1Q01538 1121 aa22.37■■□□□ 1.17
SNCAIP-214ENST00000510003 MROH2BQ7Z745 1585 aa22.34■■□□□ 1.17
SNCAIP-214ENST00000510003 CCER1Q8TC90 406 aaPredicted RBP22.32■■□□□ 1.16
SNCAIP-214ENST00000510003 EIF4G1Q04637 1599 aaKnown RBP22.3■■□□□ 1.16
SNCAIP-214ENST00000510003 CECR2Q9BXF3 1484 aa22.3■■□□□ 1.16
SNCAIP-214ENST00000510003 CENPBP07199 599 aaPredicted RBP22.3■■□□□ 1.16
SNCAIP-214ENST00000510003 WRNQ14191 1432 aaPredicted RBP eCLIP22.29■■□□□ 1.16
SNCAIP-214ENST00000510003 NEUROD1Q13562 356 aa22.28■■□□□ 1.16
SNCAIP-214ENST00000510003 BAZ1AQ9NRL2 1556 aaPredicted RBP22.27■■□□□ 1.16
SNCAIP-214ENST00000510003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.26■■□□□ 1.15
SNCAIP-214ENST00000510003 WIZO95785 1651 aa22.23■■□□□ 1.15
SNCAIP-214ENST00000510003 DIEXFQ68CQ4 756 aaKnown RBP22.23■■□□□ 1.15
SNCAIP-214ENST00000510003 EHMT2Q96KQ7 1210 aa22.19■■□□□ 1.14
SNCAIP-214ENST00000510003 GTF3C3Q9Y5Q9 886 aa22.13■■□□□ 1.13
SNCAIP-214ENST00000510003 CEP162Q5TB80 1403 aa22.04■■□□□ 1.12
SNCAIP-214ENST00000510003 TNIKQ9UKE5 1360 aa22.03■■□□□ 1.12
SNCAIP-214ENST00000510003 EEA1Q15075 1411 aa22.02■■□□□ 1.12
SNCAIP-214ENST00000510003 DNAJC5BQ9UF47 199 aa22.01■■□□□ 1.11
SNCAIP-214ENST00000510003 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
SNCAIP-214ENST00000510003 SMARCA4P51532 1647 aa21.97■■□□□ 1.11
SNCAIP-214ENST00000510003 ZNF316A6NFI3 1004 aaPredicted RBP21.97■■□□□ 1.11
SNCAIP-214ENST00000510003 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
SNCAIP-214ENST00000510003 CC2D2AQ9P2K1 1620 aa21.92■■□□□ 1.1
SNCAIP-214ENST00000510003 ABCC8Q09428 1581 aa21.89■■□□□ 1.09
SNCAIP-214ENST00000510003 SMARCA2P51531 1590 aa21.86■■□□□ 1.09
SNCAIP-214ENST00000510003 SOGA1O94964 1423 aa21.81■■□□□ 1.08
SNCAIP-214ENST00000510003 GOLGA3Q08378 1498 aa21.8■■□□□ 1.08
SNCAIP-214ENST00000510003 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
SNCAIP-214ENST00000510003 ATAD2BQ9ULI0 1458 aa21.78■■□□□ 1.08
SNCAIP-214ENST00000510003 PEG3Q9GZU2 1588 aa21.71■■□□□ 1.07
SNCAIP-214ENST00000510003 NCAPD3P42695 1498 aa21.69■■□□□ 1.06
SNCAIP-214ENST00000510003 TTBK1Q5TCY1 1321 aaPredicted RBP21.67■■□□□ 1.06
SNCAIP-214ENST00000510003 UBTFP17480 764 aaKnown RBP21.67■■□□□ 1.06
SNCAIP-214ENST00000510003 KIF21BO75037 1637 aa21.65■■□□□ 1.06
SNCAIP-214ENST00000510003 RUSC2Q8N2Y8 1516 aa21.64■■□□□ 1.05
SNCAIP-214ENST00000510003 CEP164Q9UPV0 1460 aa21.63■■□□□ 1.05
SNCAIP-214ENST00000510003 CLSPNQ9HAW4 1339 aa21.62■■□□□ 1.05
SNCAIP-214ENST00000510003 MIER1Q8N108 512 aa21.62■■□□□ 1.05
SNCAIP-214ENST00000510003 BAZ1BQ9UIG0 1483 aaKnown RBP21.61■■□□□ 1.05
SNCAIP-214ENST00000510003 YTHDC1Q96MU7 727 aaKnown RBP21.57■■□□□ 1.04
SNCAIP-214ENST00000510003 HMGXB3Q12766 1538 aa21.57■■□□□ 1.04
SNCAIP-214ENST00000510003 VPS8Q8N3P4 1428 aa21.55■■□□□ 1.04
SNCAIP-214ENST00000510003 CLIP1P30622 1438 aa21.51■■□□□ 1.03
SNCAIP-214ENST00000510003 HNRNPUL2Q1KMD3 747 aaKnown RBP21.46■■□□□ 1.03
SNCAIP-214ENST00000510003 SYNJ1O43426 1573 aa21.4■■□□□ 1.02
SNCAIP-214ENST00000510003 APLP2Q06481 763 aa21.39■■□□□ 1.01
SNCAIP-214ENST00000510003 RAPGEF2Q9Y4G8 1499 aa21.29■■□□□ 1
SNCAIP-214ENST00000510003 DHX57Q6P158 1386 aaKnown RBP21.28■■□□□ 1
SNCAIP-214ENST00000510003 SUPT16HQ9Y5B9 1047 aaKnown RBP21.23■□□□□ 0.99
SNCAIP-214ENST00000510003 ERICH3Q5RHP9 1530 aa21.22■□□□□ 0.99
SNCAIP-214ENST00000510003 CUX2O14529 1486 aa21.19■□□□□ 0.98
SNCAIP-214ENST00000510003 TOP2BQ02880 1626 aa21.18■□□□□ 0.98
SNCAIP-214ENST00000510003 RRBP1Q9P2E9 1410 aaKnown RBP21.15■□□□□ 0.98
SNCAIP-214ENST00000510003 NESP48681 1621 aa21.13■□□□□ 0.97
SNCAIP-214ENST00000510003 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
SNCAIP-214ENST00000510003 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
SNCAIP-214ENST00000510003 PRXQ9BXM0 1461 aa21.11■□□□□ 0.97
SNCAIP-214ENST00000510003 CADPSQ9ULU8 1353 aa21.11■□□□□ 0.97
SNCAIP-214ENST00000510003 CFTRP13569 1480 aa21.05■□□□□ 0.96
SNCAIP-214ENST00000510003 TSHZ2Q9NRE2 1034 aa21.03■□□□□ 0.96
SNCAIP-214ENST00000510003 LAMC3Q9Y6N6 1575 aa21.03■□□□□ 0.96
SNCAIP-214ENST00000510003 ANP32EQ9BTT0 268 aa20.98■□□□□ 0.95
SNCAIP-214ENST00000510003 CCNB3Q8WWL7 1395 aa20.97■□□□□ 0.95
SNCAIP-214ENST00000510003 KANK4Q5T7N3 995 aaPredicted RBP20.96■□□□□ 0.95
SNCAIP-214ENST00000510003 PDS5BQ9NTI5 1447 aa20.91■□□□□ 0.94
SNCAIP-214ENST00000510003 RANGAP1P46060 587 aaPredicted RBP20.9■□□□□ 0.94
SNCAIP-214ENST00000510003 MAP3K1Q13233 1512 aa20.89■□□□□ 0.93
SNCAIP-214ENST00000510003 KIF27Q86VH2 1401 aa20.87■□□□□ 0.93
SNCAIP-214ENST00000510003 MAPKBP1O60336 1514 aa20.86■□□□□ 0.93
SNCAIP-214ENST00000510003 FANCD2Q9BXW9 1451 aa20.86■□□□□ 0.93
SNCAIP-214ENST00000510003 ERCC6Q03468 1493 aa20.85■□□□□ 0.93
SNCAIP-214ENST00000510003 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms