RNA–Protein interactions for RNA: ENST00000509925.5

PCDH7-204, Transcript of protocadherin 7, humanhuman

TSL 3

Gene PCDH7, Length 543 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7-204ENST00000509925 AEBP2Q6ZN18 517 aaPredicted RBP26.3■■□□□ 1.8
PCDH7-204ENST00000509925 CHIC1Q5VXU3 224 aa24.58■■□□□ 1.53
PCDH7-204ENST00000509925 SENP3Q9H4L4 574 aaPredicted RBP22.5■■□□□ 1.19
PCDH7-204ENST00000509925 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
PCDH7-204ENST00000509925 NISCHQ9Y2I1 1504 aa21.19■□□□□ 0.98
PCDH7-204ENST00000509925 FOXD1Q16676 465 aa21.05■□□□□ 0.96
PCDH7-204ENST00000509925 POTEDQ86YR6 584 aa20.22■□□□□ 0.83
PCDH7-204ENST00000509925 MSH5O43196 834 aa19.88■□□□□ 0.77
PCDH7-204ENST00000509925 PIAS4Q8N2W9 510 aaPredicted RBP19.55■□□□□ 0.72
PCDH7-204ENST00000509925 ABCC9O60706 1549 aa19.41■□□□□ 0.7
PCDH7-204ENST00000509925 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
PCDH7-204ENST00000509925 PPP6R1Q9UPN7 881 aa19.33■□□□□ 0.68
PCDH7-204ENST00000509925 ADRA2BP18089 450 aa19.25■□□□□ 0.67
PCDH7-204ENST00000509925 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.65
PCDH7-204ENST00000509925 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
PCDH7-204ENST00000509925 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
PCDH7-204ENST00000509925 NACADO15069 1562 aa18.11■□□□□ 0.49
PCDH7-204ENST00000509925 DCAF8L2P0C7V8 631 aa18.07■□□□□ 0.48
PCDH7-204ENST00000509925 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
PCDH7-204ENST00000509925 PABPN1Q86U42 306 aaKnown RBP eCLIP18.04■□□□□ 0.48
PCDH7-204ENST00000509925 MAPK8IP2Q13387 824 aaPredicted RBP17.84■□□□□ 0.45
PCDH7-204ENST00000509925 BICRAQ9NZM4 1560 aa17.83■□□□□ 0.45
PCDH7-204ENST00000509925 DMRT2Q9Y5R5 561 aa17.77■□□□□ 0.44
PCDH7-204ENST00000509925 MYO15BQ96JP2 1530 aa17.71■□□□□ 0.43
PCDH7-204ENST00000509925 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
PCDH7-204ENST00000509925 CC2D2AQ9P2K1 1620 aa17.53■□□□□ 0.4
PCDH7-204ENST00000509925 SCRIBQ14160 1630 aa17.49■□□□□ 0.39
PCDH7-204ENST00000509925 ZCCHC6Q5VYS8 1495 aaKnown RBP17.49■□□□□ 0.39
PCDH7-204ENST00000509925 CECR2Q9BXF3 1484 aa17.48■□□□□ 0.39
PCDH7-204ENST00000509925 SHROOM4Q9ULL8 1493 aa17.43■□□□□ 0.38
PCDH7-204ENST00000509925 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
PCDH7-204ENST00000509925 EIF4G1Q04637 1599 aaKnown RBP17.4■□□□□ 0.38
PCDH7-204ENST00000509925 CACNB1Q02641 598 aaPredicted RBP17.39■□□□□ 0.37
PCDH7-204ENST00000509925 DCAF8L1A6NGE4 600 aa17.13■□□□□ 0.33
PCDH7-204ENST00000509925 DNAJC5Q9H3Z4 198 aa17.05■□□□□ 0.32
PCDH7-204ENST00000509925 PPP4R3CPQ6ZMV5 832 aa16.93■□□□□ 0.3
PCDH7-204ENST00000509925 HOXD11P31277 338 aaPredicted RBP16.92■□□□□ 0.3
PCDH7-204ENST00000509925 RNF39Q9H2S5 420 aa16.91■□□□□ 0.3
PCDH7-204ENST00000509925 CUX2O14529 1486 aa16.75■□□□□ 0.27
PCDH7-204ENST00000509925 ERCC6Q03468 1493 aa16.75■□□□□ 0.27
PCDH7-204ENST00000509925 CNKSR2Q8WXI2 1034 aa16.72■□□□□ 0.27
PCDH7-204ENST00000509925 NCAPD3P42695 1498 aa16.7■□□□□ 0.26
PCDH7-204ENST00000509925 RNF216Q9NWF9 866 aaPredicted RBP16.68■□□□□ 0.26
PCDH7-204ENST00000509925 C1QBPQ07021 282 aaKnown RBP16.65■□□□□ 0.26
PCDH7-204ENST00000509925 ATAD2BQ9ULI0 1458 aa16.65■□□□□ 0.26
PCDH7-204ENST00000509925 NESP48681 1621 aa16.63■□□□□ 0.25
PCDH7-204ENST00000509925 SMARCA4P51532 1647 aa16.62■□□□□ 0.25
PCDH7-204ENST00000509925 SMARCA2P51531 1590 aa16.59■□□□□ 0.25
PCDH7-204ENST00000509925 HMGXB3Q12766 1538 aa16.58■□□□□ 0.24
PCDH7-204ENST00000509925 BAZ1BQ9UIG0 1483 aaKnown RBP16.49■□□□□ 0.23
PCDH7-204ENST00000509925 THOC2Q8NI27 1593 aaKnown RBP16.48■□□□□ 0.23
PCDH7-204ENST00000509925 BAZ1AQ9NRL2 1556 aaPredicted RBP16.45■□□□□ 0.22
PCDH7-204ENST00000509925 KIF21AQ7Z4S6 1674 aa16.45■□□□□ 0.22
PCDH7-204ENST00000509925 LAMC3Q9Y6N6 1575 aa16.4■□□□□ 0.22
PCDH7-204ENST00000509925 PEG3Q9GZU2 1588 aa16.39■□□□□ 0.21
PCDH7-204ENST00000509925 MROH2BQ7Z745 1585 aa16.35■□□□□ 0.21
PCDH7-204ENST00000509925 NCBP3Q53F19 620 aaKnown RBP16.31■□□□□ 0.2
PCDH7-204ENST00000509925 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
PCDH7-204ENST00000509925 TRIM41Q8WV44 630 aa16.28■□□□□ 0.2
PCDH7-204ENST00000509925 WIZO95785 1651 aa16.21■□□□□ 0.18
PCDH7-204ENST00000509925 MRC2Q9UBG0 1479 aa16.19■□□□□ 0.18
PCDH7-204ENST00000509925 CADPSQ9ULU8 1353 aa16.19■□□□□ 0.18
PCDH7-204ENST00000509925 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.18
PCDH7-204ENST00000509925 WDR62O43379 1518 aa16.16■□□□□ 0.18
PCDH7-204ENST00000509925 CEP164Q9UPV0 1460 aa16.09■□□□□ 0.17
PCDH7-204ENST00000509925 FANCD2Q9BXW9 1451 aa16.04■□□□□ 0.16
PCDH7-204ENST00000509925 NPM3O75607 178 aaKnown RBP16.04■□□□□ 0.16
PCDH7-204ENST00000509925 KCNA4P22459 653 aa15.97■□□□□ 0.15
PCDH7-204ENST00000509925 OSCARQ8IYS5 282 aa15.97■□□□□ 0.15
PCDH7-204ENST00000509925 CFTRP13569 1480 aa15.96■□□□□ 0.14
PCDH7-204ENST00000509925 URB2Q14146 1524 aaKnown RBP15.95■□□□□ 0.14
PCDH7-204ENST00000509925 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
PCDH7-204ENST00000509925 TOP2AP11388 1531 aaKnown RBP15.89■□□□□ 0.13
PCDH7-204ENST00000509925 RSF1Q96T23 1441 aaPredicted RBP15.89■□□□□ 0.13
PCDH7-204ENST00000509925 RIMBP3CA6NJZ7 1639 aa15.86■□□□□ 0.13
PCDH7-204ENST00000509925 RIMBP3BA6NNM3 1639 aa15.86■□□□□ 0.13
PCDH7-204ENST00000509925 RIMBP3Q9UFD9 1639 aa15.86■□□□□ 0.13
PCDH7-204ENST00000509925 ZNF608Q9ULD9 1512 aaPredicted RBP15.8■□□□□ 0.12
PCDH7-204ENST00000509925 POTEHQ6S545 545 aa15.77■□□□□ 0.12
PCDH7-204ENST00000509925 ARHGEF11O15085 1522 aa15.74■□□□□ 0.11
PCDH7-204ENST00000509925 IFT140Q96RY7 1462 aa15.74■□□□□ 0.11
PCDH7-204ENST00000509925 CCDC88BA6NC98 1476 aa15.73■□□□□ 0.11
PCDH7-204ENST00000509925 U3KPZ7 1027 aaPredicted RBP15.73■□□□□ 0.11
PCDH7-204ENST00000509925 TOPBP1Q92547 1522 aa15.72■□□□□ 0.11
PCDH7-204ENST00000509925 CHD1O14646 1710 aa15.71■□□□□ 0.11
PCDH7-204ENST00000509925 EIF4G3O43432 1585 aaKnown RBP15.71■□□□□ 0.11
PCDH7-204ENST00000509925 CAPN15O75808 1086 aa15.69■□□□□ 0.1
PCDH7-204ENST00000509925 DSG3P32926 999 aa15.69■□□□□ 0.1
PCDH7-204ENST00000509925 SPINK5Q9NQ38 1064 aaPredicted RBP15.67■□□□□ 0.1
PCDH7-204ENST00000509925 CYB5RLQ6IPT4 315 aa15.66■□□□□ 0.1
PCDH7-204ENST00000509925 DNMBPQ6XZF7 1577 aa15.64■□□□□ 0.09
PCDH7-204ENST00000509925 AQRO60306 1485 aaKnown RBP eCLIP15.63■□□□□ 0.09
PCDH7-204ENST00000509925 TARBP1Q13395 1621 aaKnown RBP15.62■□□□□ 0.09
PCDH7-204ENST00000509925 ABCC8Q09428 1581 aa15.61■□□□□ 0.09
PCDH7-204ENST00000509925 FBLN2P98095 1184 aa15.6■□□□□ 0.09
PCDH7-204ENST00000509925 TRHP20396 242 aaPredicted RBP15.58■□□□□ 0.08
PCDH7-204ENST00000509925 ARAP1Q96P48 1450 aa15.58■□□□□ 0.08
PCDH7-204ENST00000509925 POLA1P09884 1462 aaPredicted RBP15.54■□□□□ 0.08
PCDH7-204ENST00000509925 RAD54L2Q9Y4B4 1467 aa15.52■□□□□ 0.08
PCDH7-204ENST00000509925 TDRD9Q8NDG6 1382 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 284.5 ms