RNA–Protein interactions for RNA: ENST00000509889.5

COPG1-205, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 5

Gene COPG1, Length 599 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-205ENST00000509889 NISCHQ9Y2I1 1504 aa21.67■■□□□ 1.06
COPG1-205ENST00000509889 CCDC180Q9P1Z9 1646 aa18.99■□□□□ 0.63
COPG1-205ENST00000509889 ZCCHC6Q5VYS8 1495 aaKnown RBP18.28■□□□□ 0.52
COPG1-205ENST00000509889 DCAF1Q9Y4B6 1507 aa18.12■□□□□ 0.49
COPG1-205ENST00000509889 PELP1Q8IZL8 1130 aaKnown RBP17.9■□□□□ 0.46
COPG1-205ENST00000509889 MYO15BQ96JP2 1530 aa17.87■□□□□ 0.45
COPG1-205ENST00000509889 HRCP23327 699 aa17.6■□□□□ 0.41
COPG1-205ENST00000509889 NACADO15069 1562 aa17.57■□□□□ 0.4
COPG1-205ENST00000509889 MYT1Q01538 1121 aa17.5■□□□□ 0.39
COPG1-205ENST00000509889 SHROOM4Q9ULL8 1493 aa17.47■□□□□ 0.39
COPG1-205ENST00000509889 DCAF8L2P0C7V8 631 aa17.45■□□□□ 0.38
COPG1-205ENST00000509889 ABCC9O60706 1549 aa17.37■□□□□ 0.37
COPG1-205ENST00000509889 RB1CC1Q8TDY2 1594 aa17.32■□□□□ 0.36
COPG1-205ENST00000509889 SCRIBQ14160 1630 aa17.2■□□□□ 0.34
COPG1-205ENST00000509889 SUPT5HO00267 1087 aaKnown RBP16.95■□□□□ 0.3
COPG1-205ENST00000509889 UNC13AQ9UPW8 1703 aa16.91■□□□□ 0.3
COPG1-205ENST00000509889 RSF1Q96T23 1441 aaPredicted RBP16.82■□□□□ 0.28
COPG1-205ENST00000509889 ZEB1P37275 1124 aaPredicted RBP16.79■□□□□ 0.28
COPG1-205ENST00000509889 BAZ1AQ9NRL2 1556 aaPredicted RBP16.79■□□□□ 0.28
COPG1-205ENST00000509889 PCGF6Q9BYE7 350 aa16.7■□□□□ 0.26
COPG1-205ENST00000509889 BICRAQ9NZM4 1560 aa16.69■□□□□ 0.26
COPG1-205ENST00000509889 PPARGC1BQ86YN6 1023 aaKnown RBP16.65■□□□□ 0.26
COPG1-205ENST00000509889 CECR2Q9BXF3 1484 aa16.65■□□□□ 0.26
COPG1-205ENST00000509889 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
COPG1-205ENST00000509889 TTBK1Q5TCY1 1321 aaPredicted RBP16.64■□□□□ 0.25
COPG1-205ENST00000509889 SMARCA4P51532 1647 aa16.63■□□□□ 0.25
COPG1-205ENST00000509889 SCAF1Q9H7N4 1312 aaKnown RBP16.57■□□□□ 0.24
COPG1-205ENST00000509889 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
COPG1-205ENST00000509889 PEG3Q9GZU2 1588 aa16.54■□□□□ 0.24
COPG1-205ENST00000509889 WIZO95785 1651 aa16.53■□□□□ 0.24
COPG1-205ENST00000509889 TRIM26Q12899 539 aaPredicted RBP16.52■□□□□ 0.24
COPG1-205ENST00000509889 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
COPG1-205ENST00000509889 SMARCA2P51531 1590 aa16.37■□□□□ 0.21
COPG1-205ENST00000509889 ACIN1Q9UKV3 1341 aaKnown RBP16.3■□□□□ 0.2
COPG1-205ENST00000509889 PABPN1Q86U42 306 aaKnown RBP eCLIP16.3■□□□□ 0.22e-9■■□□□ 13.7
COPG1-205ENST00000509889 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
COPG1-205ENST00000509889 ATAD2BQ9ULI0 1458 aa16.25■□□□□ 0.19
COPG1-205ENST00000509889 HMGXB3Q12766 1538 aa16.22■□□□□ 0.19
COPG1-205ENST00000509889 CCDC88BA6NC98 1476 aa16.21■□□□□ 0.19
COPG1-205ENST00000509889 BAZ1BQ9UIG0 1483 aaKnown RBP16.19■□□□□ 0.18
COPG1-205ENST00000509889 CENPBP07199 599 aaPredicted RBP16.19■□□□□ 0.18
COPG1-205ENST00000509889 NCAPD3P42695 1498 aa16.15■□□□□ 0.18
COPG1-205ENST00000509889 TRIM41Q8WV44 630 aa16.07■□□□□ 0.16
COPG1-205ENST00000509889 NEUROD1Q13562 356 aa16■□□□□ 0.15
COPG1-205ENST00000509889 GTF3C3Q9Y5Q9 886 aa15.96■□□□□ 0.15
COPG1-205ENST00000509889 EEA1Q15075 1411 aa15.93■□□□□ 0.14
COPG1-205ENST00000509889 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
COPG1-205ENST00000509889 CLSPNQ9HAW4 1339 aa15.91■□□□□ 0.14
COPG1-205ENST00000509889 ABCC8Q09428 1581 aa15.87■□□□□ 0.13
COPG1-205ENST00000509889 WRNQ14191 1432 aaPredicted RBP eCLIP15.86■□□□□ 0.13
COPG1-205ENST00000509889 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
COPG1-205ENST00000509889 LOC105371045A0A1W2PR82 267 aa15.83■□□□□ 0.12
COPG1-205ENST00000509889 CFTRP13569 1480 aa15.82■□□□□ 0.12
COPG1-205ENST00000509889 BIVM-ERCC5R4GMW8 1640 aa15.8■□□□□ 0.12
COPG1-205ENST00000509889 TOP2BQ02880 1626 aa15.79■□□□□ 0.12
COPG1-205ENST00000509889 SYNJ1O43426 1573 aa15.75■□□□□ 0.11
COPG1-205ENST00000509889 DIEXFQ68CQ4 756 aaKnown RBP15.75■□□□□ 0.11
COPG1-205ENST00000509889 CADPSQ9ULU8 1353 aa15.68■□□□□ 0.1
COPG1-205ENST00000509889 KIF21BO75037 1637 aa15.65■□□□□ 0.1
COPG1-205ENST00000509889 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
COPG1-205ENST00000509889 BCL11AQ9H165 835 aa15.6■□□□□ 0.09
COPG1-205ENST00000509889 SOGA1O94964 1423 aa15.6■□□□□ 0.09
COPG1-205ENST00000509889 GOLGA3Q08378 1498 aa15.59■□□□□ 0.09
COPG1-205ENST00000509889 CEP164Q9UPV0 1460 aa15.59■□□□□ 0.09
COPG1-205ENST00000509889 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
COPG1-205ENST00000509889 ANP32EQ9BTT0 268 aa15.59■□□□□ 0.09
COPG1-205ENST00000509889 CUX1P39880 1505 aa15.58■□□□□ 0.08
COPG1-205ENST00000509889 FAM9AQ8IZU1 332 aaPredicted RBP15.57■□□□□ 0.08
COPG1-205ENST00000509889 TNIKQ9UKE5 1360 aa15.57■□□□□ 0.08
COPG1-205ENST00000509889 ERICH3Q5RHP9 1530 aa15.53■□□□□ 0.08
COPG1-205ENST00000509889 ZNF316A6NFI3 1004 aaPredicted RBP15.52■□□□□ 0.08
COPG1-205ENST00000509889 CCER1Q8TC90 406 aaPredicted RBP15.52■□□□□ 0.08
COPG1-205ENST00000509889 FANCD2Q9BXW9 1451 aa15.49■□□□□ 0.07
COPG1-205ENST00000509889 DNMBPQ6XZF7 1577 aa15.49■□□□□ 0.07
COPG1-205ENST00000509889 KIF27Q86VH2 1401 aa15.48■□□□□ 0.07
COPG1-205ENST00000509889 RUSC2Q8N2Y8 1516 aa15.48■□□□□ 0.07
COPG1-205ENST00000509889 CEP162Q5TB80 1403 aa15.43■□□□□ 0.06
COPG1-205ENST00000509889 PRXQ9BXM0 1461 aa15.43■□□□□ 0.06
COPG1-205ENST00000509889 PDS5BQ9NTI5 1447 aa15.43■□□□□ 0.06
COPG1-205ENST00000509889 ERICH6Q7L0X2 663 aa15.38■□□□□ 0.05
COPG1-205ENST00000509889 FGD5Q6ZNL6 1462 aa15.38■□□□□ 0.05
COPG1-205ENST00000509889 TOPBP1Q92547 1522 aa15.36■□□□□ 0.05
COPG1-205ENST00000509889 ABCA10Q8WWZ4 1543 aa15.34■□□□□ 0.05
COPG1-205ENST00000509889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.34■□□□□ 0.05
COPG1-205ENST00000509889 RAPGEF2Q9Y4G8 1499 aa15.33■□□□□ 0.04
COPG1-205ENST00000509889 UBTFP17480 764 aaKnown RBP15.32■□□□□ 0.04
COPG1-205ENST00000509889 WDR97A6NE52 1622 aa15.31■□□□□ 0.04
COPG1-205ENST00000509889 NESP48681 1621 aa15.31■□□□□ 0.04
COPG1-205ENST00000509889 CUX2O14529 1486 aa15.3■□□□□ 0.04
COPG1-205ENST00000509889 CUL7Q14999 1698 aa15.3■□□□□ 0.04
COPG1-205ENST00000509889 POLA1P09884 1462 aaPredicted RBP15.28■□□□□ 0.04
COPG1-205ENST00000509889 CLIP1P30622 1438 aa15.28■□□□□ 0.04
COPG1-205ENST00000509889 KIF21AQ7Z4S6 1674 aa15.27■□□□□ 0.03
COPG1-205ENST00000509889 TSHZ2Q9NRE2 1034 aa15.26■□□□□ 0.03
COPG1-205ENST00000509889 MYT1LQ9UL68 1186 aa15.25■□□□□ 0.03
COPG1-205ENST00000509889 SUPT16HQ9Y5B9 1047 aaKnown RBP15.25■□□□□ 0.03
COPG1-205ENST00000509889 URB2Q14146 1524 aaKnown RBP15.25■□□□□ 0.03
COPG1-205ENST00000509889 VPS8Q8N3P4 1428 aa15.23■□□□□ 0.03
COPG1-205ENST00000509889 IGF1RP08069 1367 aa15.23■□□□□ 0.03
COPG1-205ENST00000509889 ABCA5Q8WWZ7 1642 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms