RNA–Protein interactions for RNA: ENST00000509722.5

ALPK1-214, Transcript of alpha kinase 1, humanhuman

TSL 2

Gene ALPK1, Length 3,931 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK1-214ENST00000509722 NISCHQ9Y2I1 1504 aa18.55■□□□□ 0.56
ALPK1-214ENST00000509722 SHROOM4Q9ULL8 1493 aa15.95■□□□□ 0.14
ALPK1-214ENST00000509722 DCAF8L2P0C7V8 631 aa15.86■□□□□ 0.13
ALPK1-214ENST00000509722 CCDC180Q9P1Z9 1646 aa15.74■□□□□ 0.11
ALPK1-214ENST00000509722 ZCCHC6Q5VYS8 1495 aaKnown RBP15.62■□□□□ 0.09
ALPK1-214ENST00000509722 SUPT5HO00267 1087 aaKnown RBP15.61■□□□□ 0.09
ALPK1-214ENST00000509722 DCAF1Q9Y4B6 1507 aa15.12■□□□□ 0.01
ALPK1-214ENST00000509722 ABCC9O60706 1549 aa15.01□□□□□ -0.01
ALPK1-214ENST00000509722 CHIC1Q5VXU3 224 aa14.93□□□□□ -0.02
ALPK1-214ENST00000509722 SCRIBQ14160 1630 aa14.89□□□□□ -0.03
ALPK1-214ENST00000509722 MYO15BQ96JP2 1530 aa14.73□□□□□ -0.05
ALPK1-214ENST00000509722 NACADO15069 1562 aa14.69□□□□□ -0.06
ALPK1-214ENST00000509722 RSF1Q96T23 1441 aaPredicted RBP14.65□□□□□ -0.06
ALPK1-214ENST00000509722 LOC105371045A0A1W2PR82 267 aa14.56□□□□□ -0.08
ALPK1-214ENST00000509722 CECR2Q9BXF3 1484 aa14.53□□□□□ -0.08
ALPK1-214ENST00000509722 RB1CC1Q8TDY2 1594 aa14.52□□□□□ -0.08
ALPK1-214ENST00000509722 TRIM41Q8WV44 630 aa14.51□□□□□ -0.09
ALPK1-214ENST00000509722 FAM9AQ8IZU1 332 aaPredicted RBP14.47□□□□□ -0.09
ALPK1-214ENST00000509722 EHMT2Q96KQ7 1210 aa14.43□□□□□ -0.1
ALPK1-214ENST00000509722 MROH2BQ7Z745 1585 aa14.43□□□□□ -0.1
ALPK1-214ENST00000509722 PCGF6Q9BYE7 350 aa14.41□□□□□ -0.1
ALPK1-214ENST00000509722 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
ALPK1-214ENST00000509722 WIZO95785 1651 aa14.32□□□□□ -0.12
ALPK1-214ENST00000509722 BAZ1AQ9NRL2 1556 aaPredicted RBP14.28□□□□□ -0.12
ALPK1-214ENST00000509722 HRCP23327 699 aa14.16□□□□□ -0.14
ALPK1-214ENST00000509722 SMARCA4P51532 1647 aa14.14□□□□□ -0.15
ALPK1-214ENST00000509722 UNC13AQ9UPW8 1703 aa14.14□□□□□ -0.15
ALPK1-214ENST00000509722 PPARGC1BQ86YN6 1023 aaKnown RBP14.1□□□□□ -0.15
ALPK1-214ENST00000509722 TRIM26Q12899 539 aaPredicted RBP14.09□□□□□ -0.15
ALPK1-214ENST00000509722 TOP2AP11388 1531 aaKnown RBP14.08□□□□□ -0.15
ALPK1-214ENST00000509722 CCDC88BA6NC98 1476 aa14.08□□□□□ -0.16
ALPK1-214ENST00000509722 BICRAQ9NZM4 1560 aa14.04□□□□□ -0.16
ALPK1-214ENST00000509722 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
ALPK1-214ENST00000509722 ABCC8Q09428 1581 aa14□□□□□ -0.17
ALPK1-214ENST00000509722 SMARCA2P51531 1590 aa13.99□□□□□ -0.17
ALPK1-214ENST00000509722 UBTFP17480 764 aaKnown RBP13.92□□□□□ -0.18
ALPK1-214ENST00000509722 TTBK1Q5TCY1 1321 aaPredicted RBP13.91□□□□□ -0.18
ALPK1-214ENST00000509722 BAZ1BQ9UIG0 1483 aaKnown RBP13.89□□□□□ -0.19
ALPK1-214ENST00000509722 EIF4G1Q04637 1599 aaKnown RBP13.89□□□□□ -0.19
ALPK1-214ENST00000509722 ATAD2BQ9ULI0 1458 aa13.88□□□□□ -0.19
ALPK1-214ENST00000509722 SOGA1O94964 1423 aa13.87□□□□□ -0.19
ALPK1-214ENST00000509722 CSRNP3Q8WYN3 585 aa13.85□□□□□ -0.19
ALPK1-214ENST00000509722 WRNQ14191 1432 aaPredicted RBP eCLIP13.83□□□□□ -0.2
ALPK1-214ENST00000509722 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
ALPK1-214ENST00000509722 RANGAP1P46060 587 aaPredicted RBP13.78□□□□□ -0.2
ALPK1-214ENST00000509722 RUSC2Q8N2Y8 1516 aa13.78□□□□□ -0.2
ALPK1-214ENST00000509722 SCAF1Q9H7N4 1312 aaKnown RBP13.74□□□□□ -0.21
ALPK1-214ENST00000509722 EEA1Q15075 1411 aa13.73□□□□□ -0.21
ALPK1-214ENST00000509722 CEP162Q5TB80 1403 aa13.73□□□□□ -0.21
ALPK1-214ENST00000509722 ZEB1P37275 1124 aaPredicted RBP13.71□□□□□ -0.21
ALPK1-214ENST00000509722 TNIKQ9UKE5 1360 aa13.69□□□□□ -0.22
ALPK1-214ENST00000509722 SYNJ1O43426 1573 aa13.66□□□□□ -0.22
ALPK1-214ENST00000509722 GOLGA3Q08378 1498 aa13.66□□□□□ -0.22
ALPK1-214ENST00000509722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
ALPK1-214ENST00000509722 CCER1Q8TC90 406 aaPredicted RBP13.64□□□□□ -0.23
ALPK1-214ENST00000509722 NCAPD3P42695 1498 aa13.62□□□□□ -0.23
ALPK1-214ENST00000509722 APLP2Q06481 763 aa13.61□□□□□ -0.23
ALPK1-214ENST00000509722 CEP164Q9UPV0 1460 aa13.6□□□□□ -0.23
ALPK1-214ENST00000509722 CLIP1P30622 1438 aa13.55□□□□□ -0.24
ALPK1-214ENST00000509722 HMGXB3Q12766 1538 aa13.55□□□□□ -0.24
ALPK1-214ENST00000509722 RAPGEF2Q9Y4G8 1499 aa13.52□□□□□ -0.24
ALPK1-214ENST00000509722 MYT1Q01538 1121 aa13.5□□□□□ -0.25
ALPK1-214ENST00000509722 HNRNPUL2Q1KMD3 747 aaKnown RBP13.49□□□□□ -0.25
ALPK1-214ENST00000509722 TOP2BQ02880 1626 aa13.49□□□□□ -0.25
ALPK1-214ENST00000509722 CFTRP13569 1480 aa13.46□□□□□ -0.25
ALPK1-214ENST00000509722 KIF21BO75037 1637 aa13.46□□□□□ -0.26
ALPK1-214ENST00000509722 KIF27Q86VH2 1401 aa13.45□□□□□ -0.26
ALPK1-214ENST00000509722 CUX1P39880 1505 aa13.44□□□□□ -0.26
ALPK1-214ENST00000509722 CADPSQ9ULU8 1353 aa13.43□□□□□ -0.26
ALPK1-214ENST00000509722 VPS8Q8N3P4 1428 aa13.41□□□□□ -0.26
ALPK1-214ENST00000509722 BIVM-ERCC5R4GMW8 1640 aa13.39□□□□□ -0.27
ALPK1-214ENST00000509722 CC2D2AQ9P2K1 1620 aa13.38□□□□□ -0.27
ALPK1-214ENST00000509722 CUX2O14529 1486 aa13.37□□□□□ -0.27
ALPK1-214ENST00000509722 PRXQ9BXM0 1461 aa13.34□□□□□ -0.27
ALPK1-214ENST00000509722 ATP1B4Q9UN42 357 aaPredicted RBP13.32□□□□□ -0.28
ALPK1-214ENST00000509722 ERICH3Q5RHP9 1530 aa13.29□□□□□ -0.28
ALPK1-214ENST00000509722 FANCD2Q9BXW9 1451 aa13.29□□□□□ -0.28
ALPK1-214ENST00000509722 FGD5Q6ZNL6 1462 aa13.29□□□□□ -0.28
ALPK1-214ENST00000509722 P3H3Q8IVL6 736 aa13.28□□□□□ -0.28
ALPK1-214ENST00000509722 IGF1RP08069 1367 aa13.27□□□□□ -0.28
ALPK1-214ENST00000509722 CARMIL1Q5VZK9 1371 aa13.27□□□□□ -0.28
ALPK1-214ENST00000509722 KANK4Q5T7N3 995 aaPredicted RBP13.27□□□□□ -0.29
ALPK1-214ENST00000509722 ITGAEP38570 1179 aa13.26□□□□□ -0.29
ALPK1-214ENST00000509722 NESP48681 1621 aa13.26□□□□□ -0.29
ALPK1-214ENST00000509722 ARAP1Q96P48 1450 aa13.24□□□□□ -0.29
ALPK1-214ENST00000509722 DNAJC5BQ9UF47 199 aa13.22□□□□□ -0.29
ALPK1-214ENST00000509722 RAD54L2Q9Y4B4 1467 aa13.21□□□□□ -0.3
ALPK1-214ENST00000509722 DIEXFQ68CQ4 756 aaKnown RBP13.2□□□□□ -0.3
ALPK1-214ENST00000509722 NEUROD1Q13562 356 aa13.19□□□□□ -0.3
ALPK1-214ENST00000509722 ARHGAP35Q9NRY4 1499 aa13.18□□□□□ -0.3
ALPK1-214ENST00000509722 PRDM2Q13029 1718 aa13.17□□□□□ -0.3
ALPK1-214ENST00000509722 GTF3C3Q9Y5Q9 886 aa13.15□□□□□ -0.3
ALPK1-214ENST00000509722 TOPBP1Q92547 1522 aa13.14□□□□□ -0.31
ALPK1-214ENST00000509722 POLA1P09884 1462 aaPredicted RBP13.14□□□□□ -0.31
ALPK1-214ENST00000509722 TDRD9Q8NDG6 1382 aaKnown RBP13.13□□□□□ -0.31
ALPK1-214ENST00000509722 ZNF316A6NFI3 1004 aaPredicted RBP13.12□□□□□ -0.31
ALPK1-214ENST00000509722 DNMBPQ6XZF7 1577 aa13.12□□□□□ -0.31
ALPK1-214ENST00000509722 ACIN1Q9UKV3 1341 aaKnown RBP13.11□□□□□ -0.31
ALPK1-214ENST00000509722 FAM50AQ14320 339 aaKnown RBP13.11□□□□□ -0.31
ALPK1-214ENST00000509722 PDS5BQ9NTI5 1447 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms