RNA–Protein interactions for RNA: ENST00000509705.3

NFKBIB-203, Transcript of NFKB inhibitor beta, humanhuman

TSL 2

Gene NFKBIB, Length 2,200 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIB-203ENST00000509705 NISCHQ9Y2I1 1504 aa38.99■■■■□ 3.83
NFKBIB-203ENST00000509705 CCDC180Q9P1Z9 1646 aa34.17■■■■□ 3.06
NFKBIB-203ENST00000509705 ZCCHC6Q5VYS8 1495 aaKnown RBP32.68■■■□□ 2.82
NFKBIB-203ENST00000509705 ABCC9O60706 1549 aa32.65■■■□□ 2.82
NFKBIB-203ENST00000509705 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.75
NFKBIB-203ENST00000509705 DCAF8L2P0C7V8 631 aa32.26■■■□□ 2.75
NFKBIB-203ENST00000509705 SHROOM4Q9ULL8 1493 aa32.19■■■□□ 2.74
NFKBIB-203ENST00000509705 MYO15BQ96JP2 1530 aa32.03■■■□□ 2.72
NFKBIB-203ENST00000509705 NACADO15069 1562 aa31.93■■■□□ 2.7
NFKBIB-203ENST00000509705 SUPT5HO00267 1087 aaKnown RBP31.78■■■□□ 2.68
NFKBIB-203ENST00000509705 RB1CC1Q8TDY2 1594 aa31.73■■■□□ 2.67
NFKBIB-203ENST00000509705 SCRIBQ14160 1630 aa31.36■■■□□ 2.61
NFKBIB-203ENST00000509705 CHIC1Q5VXU3 224 aa31.21■■■□□ 2.59
NFKBIB-203ENST00000509705 HRCP23327 699 aa31.14■■■□□ 2.58
NFKBIB-203ENST00000509705 UNC13AQ9UPW8 1703 aa31.06■■■□□ 2.56
NFKBIB-203ENST00000509705 BICRAQ9NZM4 1560 aa30.81■■■□□ 2.52
NFKBIB-203ENST00000509705 PCGF6Q9BYE7 350 aa30.72■■■□□ 2.51
NFKBIB-203ENST00000509705 PABPN1Q86U42 306 aaKnown RBP eCLIP30.71■■■□□ 2.51
NFKBIB-203ENST00000509705 PPARGC1BQ86YN6 1023 aaKnown RBP30.37■■■□□ 2.45
NFKBIB-203ENST00000509705 CECR2Q9BXF3 1484 aa30.33■■■□□ 2.45
NFKBIB-203ENST00000509705 LOC105371045A0A1W2PR82 267 aa30.27■■■□□ 2.44
NFKBIB-203ENST00000509705 BAZ1AQ9NRL2 1556 aaPredicted RBP30.12■■■□□ 2.41
NFKBIB-203ENST00000509705 MROH2BQ7Z745 1585 aa30.11■■■□□ 2.41
NFKBIB-203ENST00000509705 RSF1Q96T23 1441 aaPredicted RBP30.1■■■□□ 2.41
NFKBIB-203ENST00000509705 TRIM26Q12899 539 aaPredicted RBP30.06■■■□□ 2.4
NFKBIB-203ENST00000509705 SMARCA4P51532 1647 aa30.05■■■□□ 2.4
NFKBIB-203ENST00000509705 EIF4G1Q04637 1599 aaKnown RBP29.89■■■□□ 2.38
NFKBIB-203ENST00000509705 WIZO95785 1651 aa29.83■■■□□ 2.37
NFKBIB-203ENST00000509705 PEG3Q9GZU2 1588 aa29.72■■■□□ 2.35
NFKBIB-203ENST00000509705 ATAD2BQ9ULI0 1458 aa29.67■■■□□ 2.34
NFKBIB-203ENST00000509705 ZEB1P37275 1124 aaPredicted RBP29.64■■■□□ 2.33
NFKBIB-203ENST00000509705 SMARCA2P51531 1590 aa29.62■■■□□ 2.33
NFKBIB-203ENST00000509705 TRIM41Q8WV44 630 aa29.58■■■□□ 2.33
NFKBIB-203ENST00000509705 CC2D2AQ9P2K1 1620 aa29.54■■■□□ 2.32
NFKBIB-203ENST00000509705 TOP2AP11388 1531 aaKnown RBP29.52■■■□□ 2.32
NFKBIB-203ENST00000509705 NCAPD3P42695 1498 aa29.48■■■□□ 2.31
NFKBIB-203ENST00000509705 BAZ1BQ9UIG0 1483 aaKnown RBP29.45■■■□□ 2.31
NFKBIB-203ENST00000509705 HMGXB3Q12766 1538 aa29.4■■■□□ 2.3
NFKBIB-203ENST00000509705 FAM9AQ8IZU1 332 aaPredicted RBP29.34■■■□□ 2.29
NFKBIB-203ENST00000509705 CCDC88BA6NC98 1476 aa29.21■■■□□ 2.27
NFKBIB-203ENST00000509705 DNAJC5BQ9UF47 199 aa29.17■■■□□ 2.26
NFKBIB-203ENST00000509705 EHMT2Q96KQ7 1210 aa29.05■■■□□ 2.24
NFKBIB-203ENST00000509705 PELP1Q8IZL8 1130 aaKnown RBP29.04■■■□□ 2.24
NFKBIB-203ENST00000509705 SCAF1Q9H7N4 1312 aaKnown RBP29■■■□□ 2.23
NFKBIB-203ENST00000509705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.72■■■□□ 2.19
NFKBIB-203ENST00000509705 CFTRP13569 1480 aa28.71■■■□□ 2.19
NFKBIB-203ENST00000509705 CADPSQ9ULU8 1353 aa28.69■■■□□ 2.18
NFKBIB-203ENST00000509705 CCER1Q8TC90 406 aaPredicted RBP28.67■■■□□ 2.18
NFKBIB-203ENST00000509705 WRNQ14191 1432 aaPredicted RBP eCLIP28.61■■■□□ 2.17
NFKBIB-203ENST00000509705 ACIN1Q9UKV3 1341 aaKnown RBP28.56■■■□□ 2.16
NFKBIB-203ENST00000509705 NESP48681 1621 aa28.55■■■□□ 2.16
NFKBIB-203ENST00000509705 ABCC8Q09428 1581 aa28.54■■■□□ 2.16
NFKBIB-203ENST00000509705 LAMC3Q9Y6N6 1575 aa28.52■■■□□ 2.16
NFKBIB-203ENST00000509705 PRDM2Q13029 1718 aa28.5■■■□□ 2.15
NFKBIB-203ENST00000509705 NEUROD1Q13562 356 aa28.46■■■□□ 2.15
NFKBIB-203ENST00000509705 CEP162Q5TB80 1403 aa28.46■■■□□ 2.15
NFKBIB-203ENST00000509705 DIEXFQ68CQ4 756 aaKnown RBP28.42■■■□□ 2.14
NFKBIB-203ENST00000509705 TNIKQ9UKE5 1360 aa28.39■■■□□ 2.13
NFKBIB-203ENST00000509705 FANCD2Q9BXW9 1451 aa28.36■■■□□ 2.13
NFKBIB-203ENST00000509705 SOGA1O94964 1423 aa28.34■■■□□ 2.13
NFKBIB-203ENST00000509705 EEA1Q15075 1411 aa28.31■■■□□ 2.12
NFKBIB-203ENST00000509705 PDS5BQ9NTI5 1447 aa28.31■■■□□ 2.12
NFKBIB-203ENST00000509705 CENPBP07199 599 aaPredicted RBP28.3■■■□□ 2.12
NFKBIB-203ENST00000509705 TTBK1Q5TCY1 1321 aaPredicted RBP28.27■■■□□ 2.12
NFKBIB-203ENST00000509705 SYNJ1O43426 1573 aa28.23■■■□□ 2.11
NFKBIB-203ENST00000509705 GTF3C3Q9Y5Q9 886 aa28.22■■■□□ 2.11
NFKBIB-203ENST00000509705 CEP164Q9UPV0 1460 aa28.21■■■□□ 2.11
NFKBIB-203ENST00000509705 RUSC2Q8N2Y8 1516 aa28.19■■■□□ 2.1
NFKBIB-203ENST00000509705 CSRNP3Q8WYN3 585 aa28.19■■■□□ 2.1
NFKBIB-203ENST00000509705 KIF21AQ7Z4S6 1674 aa28.19■■■□□ 2.1
NFKBIB-203ENST00000509705 CUX1P39880 1505 aa28.18■■■□□ 2.1
NFKBIB-203ENST00000509705 TOP2BQ02880 1626 aa28.15■■■□□ 2.1
NFKBIB-203ENST00000509705 GOLGA3Q08378 1498 aa28.14■■■□□ 2.1
NFKBIB-203ENST00000509705 BIVM-ERCC5R4GMW8 1640 aa28.13■■■□□ 2.09
NFKBIB-203ENST00000509705 ZNF316A6NFI3 1004 aaPredicted RBP28.1■■■□□ 2.09
NFKBIB-203ENST00000509705 UBTFP17480 764 aaKnown RBP28.09■■■□□ 2.09
NFKBIB-203ENST00000509705 URB2Q14146 1524 aaKnown RBP28.05■■■□□ 2.08
NFKBIB-203ENST00000509705 DNMBPQ6XZF7 1577 aa28.04■■■□□ 2.08
NFKBIB-203ENST00000509705 TOPBP1Q92547 1522 aa28.02■■■□□ 2.08
NFKBIB-203ENST00000509705 ERCC6Q03468 1493 aa28.02■■■□□ 2.08
NFKBIB-203ENST00000509705 MRC2Q9UBG0 1479 aa27.98■■■□□ 2.07
NFKBIB-203ENST00000509705 KIF21BO75037 1637 aa27.96■■■□□ 2.07
NFKBIB-203ENST00000509705 FGD5Q6ZNL6 1462 aa27.92■■■□□ 2.06
NFKBIB-203ENST00000509705 THOC2Q8NI27 1593 aaKnown RBP27.86■■■□□ 2.05
NFKBIB-203ENST00000509705 WDR62O43379 1518 aa27.85■■■□□ 2.05
NFKBIB-203ENST00000509705 POLA1P09884 1462 aaPredicted RBP27.85■■■□□ 2.05
NFKBIB-203ENST00000509705 CLIP1P30622 1438 aa27.81■■■□□ 2.04
NFKBIB-203ENST00000509705 VPS8Q8N3P4 1428 aa27.78■■■□□ 2.04
NFKBIB-203ENST00000509705 HNRNPUL2Q1KMD3 747 aaKnown RBP27.78■■■□□ 2.04
NFKBIB-203ENST00000509705 RAD54L2Q9Y4B4 1467 aa27.75■■■□□ 2.03
NFKBIB-203ENST00000509705 MIER1Q8N108 512 aa27.75■■■□□ 2.03
NFKBIB-203ENST00000509705 YTHDC1Q96MU7 727 aaKnown RBP27.74■■■□□ 2.03
NFKBIB-203ENST00000509705 MYT1Q01538 1121 aa27.72■■■□□ 2.03
NFKBIB-203ENST00000509705 CUX2O14529 1486 aa27.68■■■□□ 2.02
NFKBIB-203ENST00000509705 ABCA10Q8WWZ4 1543 aa27.68■■■□□ 2.02
NFKBIB-203ENST00000509705 KIF27Q86VH2 1401 aa27.64■■■□□ 2.02
NFKBIB-203ENST00000509705 RAPGEF2Q9Y4G8 1499 aa27.64■■■□□ 2.02
NFKBIB-203ENST00000509705 TARBP1Q13395 1621 aaKnown RBP27.63■■■□□ 2.01
NFKBIB-203ENST00000509705 WDR97A6NE52 1622 aa27.62■■■□□ 2.01
NFKBIB-203ENST00000509705 IFT140Q96RY7 1462 aa27.58■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms