RNA–Protein interactions for RNA: ENST00000508477.5

LIFR-207, Transcript of LIF receptor alpha, humanhuman

TSL 4

Gene LIFR, Length 552 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIFR-207ENST00000508477 AEBP2Q6ZN18 517 aaPredicted RBP24.39■■□□□ 1.49
LIFR-207ENST00000508477 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
LIFR-207ENST00000508477 NISCHQ9Y2I1 1504 aa22.21■■□□□ 1.15
LIFR-207ENST00000508477 SENP3Q9H4L4 574 aaPredicted RBP20.87■□□□□ 0.93
LIFR-207ENST00000508477 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
LIFR-207ENST00000508477 CCDC180Q9P1Z9 1646 aa19.43■□□□□ 0.7
LIFR-207ENST00000508477 FOXD1Q16676 465 aa19.42■□□□□ 0.7
LIFR-207ENST00000508477 ZCCHC6Q5VYS8 1495 aaKnown RBP18.67■□□□□ 0.58
LIFR-207ENST00000508477 PLPPR3Q6T4P5 718 aa18.55■□□□□ 0.56
LIFR-207ENST00000508477 DCAF1Q9Y4B6 1507 aa18.52■□□□□ 0.56
LIFR-207ENST00000508477 MYO15BQ96JP2 1530 aa18.31■□□□□ 0.52
LIFR-207ENST00000508477 MSH5O43196 834 aa18.23■□□□□ 0.51
LIFR-207ENST00000508477 PIAS4Q8N2W9 510 aaPredicted RBP18.15■□□□□ 0.5
LIFR-207ENST00000508477 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.49
LIFR-207ENST00000508477 ADRA2BP18089 450 aa18.09■□□□□ 0.49
LIFR-207ENST00000508477 NACADO15069 1562 aa18.04■□□□□ 0.48
LIFR-207ENST00000508477 ABCC9O60706 1549 aa18.01■□□□□ 0.47
LIFR-207ENST00000508477 DCAF8L2P0C7V8 631 aa17.98■□□□□ 0.47
LIFR-207ENST00000508477 SHROOM4Q9ULL8 1493 aa17.83■□□□□ 0.45
LIFR-207ENST00000508477 RB1CC1Q8TDY2 1594 aa17.82■□□□□ 0.44
LIFR-207ENST00000508477 POTEDQ86YR6 584 aa17.76■□□□□ 0.43
LIFR-207ENST00000508477 SCRIBQ14160 1630 aa17.63■□□□□ 0.41
LIFR-207ENST00000508477 UNC13AQ9UPW8 1703 aa17.44■□□□□ 0.38
LIFR-207ENST00000508477 BICRAQ9NZM4 1560 aa17.26■□□□□ 0.35
LIFR-207ENST00000508477 SUPT5HO00267 1087 aaKnown RBP17.24■□□□□ 0.35
LIFR-207ENST00000508477 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.34
LIFR-207ENST00000508477 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
LIFR-207ENST00000508477 CECR2Q9BXF3 1484 aa17.13■□□□□ 0.33
LIFR-207ENST00000508477 MROH2BQ7Z745 1585 aa17.07■□□□□ 0.32
LIFR-207ENST00000508477 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
LIFR-207ENST00000508477 PEG3Q9GZU2 1588 aa16.94■□□□□ 0.3
LIFR-207ENST00000508477 PABPN1Q86U42 306 aaKnown RBP eCLIP16.93■□□□□ 0.3
LIFR-207ENST00000508477 WIZO95785 1651 aa16.93■□□□□ 0.3
LIFR-207ENST00000508477 TOP2AP11388 1531 aaKnown RBP16.84■□□□□ 0.29
LIFR-207ENST00000508477 SMARCA2P51531 1590 aa16.77■□□□□ 0.28
LIFR-207ENST00000508477 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
LIFR-207ENST00000508477 EIF4G1Q04637 1599 aaKnown RBP16.7■□□□□ 0.26
LIFR-207ENST00000508477 NCAPD3P42695 1498 aa16.64■□□□□ 0.25
LIFR-207ENST00000508477 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
LIFR-207ENST00000508477 HMGXB3Q12766 1538 aa16.63■□□□□ 0.25
LIFR-207ENST00000508477 MAPK8IP2Q13387 824 aaPredicted RBP16.62■□□□□ 0.25
LIFR-207ENST00000508477 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
LIFR-207ENST00000508477 BAZ1BQ9UIG0 1483 aaKnown RBP16.6■□□□□ 0.25
LIFR-207ENST00000508477 DMRT2Q9Y5R5 561 aa16.53■□□□□ 0.24
LIFR-207ENST00000508477 CC2D2AQ9P2K1 1620 aa16.41■□□□□ 0.22
LIFR-207ENST00000508477 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
LIFR-207ENST00000508477 CFTRP13569 1480 aa16.26■□□□□ 0.19
LIFR-207ENST00000508477 PRDM2Q13029 1718 aa16.25■□□□□ 0.19
LIFR-207ENST00000508477 PPP4R3CPQ6ZMV5 832 aa16.25■□□□□ 0.19
LIFR-207ENST00000508477 ABCC8Q09428 1581 aa16.19■□□□□ 0.18
LIFR-207ENST00000508477 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
LIFR-207ENST00000508477 CADPSQ9ULU8 1353 aa16.15■□□□□ 0.18
LIFR-207ENST00000508477 BIVM-ERCC5R4GMW8 1640 aa16.12■□□□□ 0.17
LIFR-207ENST00000508477 EEA1Q15075 1411 aa16.11■□□□□ 0.17
LIFR-207ENST00000508477 TOP2BQ02880 1626 aa16.11■□□□□ 0.17
LIFR-207ENST00000508477 SYNJ1O43426 1573 aa16.09■□□□□ 0.17
LIFR-207ENST00000508477 LAMC3Q9Y6N6 1575 aa16.06■□□□□ 0.16
LIFR-207ENST00000508477 CUX1P39880 1505 aa15.97■□□□□ 0.15
LIFR-207ENST00000508477 CNKSR2Q8WXI2 1034 aa15.96■□□□□ 0.15
LIFR-207ENST00000508477 LOC105371045A0A1W2PR82 267 aa15.94■□□□□ 0.14
LIFR-207ENST00000508477 FANCD2Q9BXW9 1451 aa15.93■□□□□ 0.14
LIFR-207ENST00000508477 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
LIFR-207ENST00000508477 SOGA1O94964 1423 aa15.93■□□□□ 0.14
LIFR-207ENST00000508477 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
LIFR-207ENST00000508477 PDS5BQ9NTI5 1447 aa15.88■□□□□ 0.13
LIFR-207ENST00000508477 DNMBPQ6XZF7 1577 aa15.87■□□□□ 0.13
LIFR-207ENST00000508477 DCAF8L1A6NGE4 600 aa15.86■□□□□ 0.13
LIFR-207ENST00000508477 KIF21BO75037 1637 aa15.86■□□□□ 0.13
LIFR-207ENST00000508477 FAM9AQ8IZU1 332 aaPredicted RBP15.85■□□□□ 0.13
LIFR-207ENST00000508477 NESP48681 1621 aa15.85■□□□□ 0.13
LIFR-207ENST00000508477 RUSC2Q8N2Y8 1516 aa15.84■□□□□ 0.13
LIFR-207ENST00000508477 CEP164Q9UPV0 1460 aa15.84■□□□□ 0.13
LIFR-207ENST00000508477 RNF216Q9NWF9 866 aaPredicted RBP15.82■□□□□ 0.12
LIFR-207ENST00000508477 KIF27Q86VH2 1401 aa15.79■□□□□ 0.12
LIFR-207ENST00000508477 TNIKQ9UKE5 1360 aa15.79■□□□□ 0.12
LIFR-207ENST00000508477 DNAJC5BQ9UF47 199 aa15.79■□□□□ 0.12
LIFR-207ENST00000508477 TOPBP1Q92547 1522 aa15.78■□□□□ 0.12
LIFR-207ENST00000508477 GOLGA3Q08378 1498 aa15.78■□□□□ 0.12
LIFR-207ENST00000508477 FGD5Q6ZNL6 1462 aa15.77■□□□□ 0.11
LIFR-207ENST00000508477 ERICH3Q5RHP9 1530 aa15.76■□□□□ 0.11
LIFR-207ENST00000508477 KIF21AQ7Z4S6 1674 aa15.74■□□□□ 0.11
LIFR-207ENST00000508477 PRXQ9BXM0 1461 aa15.74■□□□□ 0.11
LIFR-207ENST00000508477 ABCA10Q8WWZ4 1543 aa15.73■□□□□ 0.11
LIFR-207ENST00000508477 URB2Q14146 1524 aaKnown RBP15.72■□□□□ 0.11
LIFR-207ENST00000508477 POLA1P09884 1462 aaPredicted RBP15.71■□□□□ 0.1
LIFR-207ENST00000508477 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
LIFR-207ENST00000508477 NCBP3Q53F19 620 aaKnown RBP15.67■□□□□ 0.1
LIFR-207ENST00000508477 CUX2O14529 1486 aa15.65■□□□□ 0.1
LIFR-207ENST00000508477 MRC2Q9UBG0 1479 aa15.65■□□□□ 0.1
LIFR-207ENST00000508477 CACNB1Q02641 598 aaPredicted RBP15.64■□□□□ 0.09
LIFR-207ENST00000508477 IGF1RP08069 1367 aa15.63■□□□□ 0.09
LIFR-207ENST00000508477 RAPGEF2Q9Y4G8 1499 aa15.63■□□□□ 0.09
LIFR-207ENST00000508477 CEP162Q5TB80 1403 aa15.61■□□□□ 0.09
LIFR-207ENST00000508477 WDR62O43379 1518 aa15.6■□□□□ 0.09
LIFR-207ENST00000508477 TARBP1Q13395 1621 aaKnown RBP15.59■□□□□ 0.09
LIFR-207ENST00000508477 UBTFP17480 764 aaKnown RBP15.58■□□□□ 0.08
LIFR-207ENST00000508477 ABCA5Q8WWZ7 1642 aa15.57■□□□□ 0.08
LIFR-207ENST00000508477 CUL7Q14999 1698 aa15.57■□□□□ 0.08
LIFR-207ENST00000508477 RAD54L2Q9Y4B4 1467 aa15.57■□□□□ 0.08
LIFR-207ENST00000508477 CARMIL1Q5VZK9 1371 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms