RNA–Protein interactions for RNA: ENST00000507232.5

SPDL1-206, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 1 (best)

Gene SPDL1, Length 2,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-206ENST00000507232 NISCHQ9Y2I1 1504 aa27.26■■□□□ 1.96
SPDL1-206ENST00000507232 SHROOM4Q9ULL8 1493 aa23.4■■□□□ 1.34
SPDL1-206ENST00000507232 CCDC180Q9P1Z9 1646 aa23.17■■□□□ 1.3
SPDL1-206ENST00000507232 ZCCHC6Q5VYS8 1495 aaKnown RBP23.01■■□□□ 1.27
SPDL1-206ENST00000507232 DCAF8L2P0C7V8 631 aa22.93■■□□□ 1.26
SPDL1-206ENST00000507232 SUPT5HO00267 1087 aaKnown RBP22.84■■□□□ 1.25
SPDL1-206ENST00000507232 DCAF1Q9Y4B6 1507 aa22.24■■□□□ 1.15
SPDL1-206ENST00000507232 CHIC1Q5VXU3 224 aa22.01■■□□□ 1.11
SPDL1-206ENST00000507232 MYO15BQ96JP2 1530 aa21.95■■□□□ 1.1
SPDL1-206ENST00000507232 SCRIBQ14160 1630 aa21.9■■□□□ 1.1
SPDL1-206ENST00000507232 ABCC9O60706 1549 aa21.83■■□□□ 1.08
SPDL1-206ENST00000507232 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
SPDL1-206ENST00000507232 LOC105371045A0A1W2PR82 267 aa21.48■■□□□ 1.03
SPDL1-206ENST00000507232 NACADO15069 1562 aa21.48■■□□□ 1.03
SPDL1-206ENST00000507232 CECR2Q9BXF3 1484 aa21.38■■□□□ 1.01
SPDL1-206ENST00000507232 RB1CC1Q8TDY2 1594 aa21.37■■□□□ 1.01
SPDL1-206ENST00000507232 MROH2BQ7Z745 1585 aa21.26■□□□□ 0.99
SPDL1-206ENST00000507232 PCGF6Q9BYE7 350 aa21.26■□□□□ 0.99
SPDL1-206ENST00000507232 TRIM41Q8WV44 630 aa21.19■□□□□ 0.98
SPDL1-206ENST00000507232 WIZO95785 1651 aa21.18■□□□□ 0.98
SPDL1-206ENST00000507232 FAM9AQ8IZU1 332 aaPredicted RBP21.17■□□□□ 0.98
SPDL1-206ENST00000507232 EHMT2Q96KQ7 1210 aa21.11■□□□□ 0.97
SPDL1-206ENST00000507232 HRCP23327 699 aa21.04■□□□□ 0.96
SPDL1-206ENST00000507232 UNC13AQ9UPW8 1703 aa20.97■□□□□ 0.95
SPDL1-206ENST00000507232 BAZ1AQ9NRL2 1556 aaPredicted RBP20.93■□□□□ 0.94
SPDL1-206ENST00000507232 PABPN1Q86U42 306 aaKnown RBP eCLIP20.91■□□□□ 0.94
SPDL1-206ENST00000507232 PPARGC1BQ86YN6 1023 aaKnown RBP20.83■□□□□ 0.92
SPDL1-206ENST00000507232 SMARCA4P51532 1647 aa20.82■□□□□ 0.92
SPDL1-206ENST00000507232 TRIM26Q12899 539 aaPredicted RBP20.77■□□□□ 0.92
SPDL1-206ENST00000507232 TOP2AP11388 1531 aaKnown RBP20.74■□□□□ 0.91
SPDL1-206ENST00000507232 CCDC88BA6NC98 1476 aa20.71■□□□□ 0.91
SPDL1-206ENST00000507232 EIF4G1Q04637 1599 aaKnown RBP20.71■□□□□ 0.91
SPDL1-206ENST00000507232 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
SPDL1-206ENST00000507232 BICRAQ9NZM4 1560 aa20.68■□□□□ 0.9
SPDL1-206ENST00000507232 SMARCA2P51531 1590 aa20.65■□□□□ 0.9
SPDL1-206ENST00000507232 SOGA1O94964 1423 aa20.44■□□□□ 0.86
SPDL1-206ENST00000507232 RUSC2Q8N2Y8 1516 aa20.38■□□□□ 0.85
SPDL1-206ENST00000507232 TTBK1Q5TCY1 1321 aaPredicted RBP20.36■□□□□ 0.85
SPDL1-206ENST00000507232 ATAD2BQ9ULI0 1458 aa20.32■□□□□ 0.84
SPDL1-206ENST00000507232 PEG3Q9GZU2 1588 aa20.32■□□□□ 0.84
SPDL1-206ENST00000507232 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
SPDL1-206ENST00000507232 WRNQ14191 1432 aaPredicted RBP eCLIP20.26■□□□□ 0.83
SPDL1-206ENST00000507232 UBTFP17480 764 aaKnown RBP20.25■□□□□ 0.83
SPDL1-206ENST00000507232 CSRNP3Q8WYN3 585 aa20.25■□□□□ 0.83
SPDL1-206ENST00000507232 CEP162Q5TB80 1403 aa20.22■□□□□ 0.83
SPDL1-206ENST00000507232 SYNJ1O43426 1573 aa20.2■□□□□ 0.82
SPDL1-206ENST00000507232 ZEB1P37275 1124 aaPredicted RBP20.15■□□□□ 0.82
SPDL1-206ENST00000507232 TNIKQ9UKE5 1360 aa20.13■□□□□ 0.81
SPDL1-206ENST00000507232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.12■□□□□ 0.81
SPDL1-206ENST00000507232 EEA1Q15075 1411 aa20.11■□□□□ 0.81
SPDL1-206ENST00000507232 GOLGA3Q08378 1498 aa20.07■□□□□ 0.8
SPDL1-206ENST00000507232 RANGAP1P46060 587 aaPredicted RBP20.06■□□□□ 0.8
SPDL1-206ENST00000507232 CCER1Q8TC90 406 aaPredicted RBP20■□□□□ 0.79
SPDL1-206ENST00000507232 CEP164Q9UPV0 1460 aa19.95■□□□□ 0.78
SPDL1-206ENST00000507232 RAPGEF2Q9Y4G8 1499 aa19.92■□□□□ 0.78
SPDL1-206ENST00000507232 KIF21BO75037 1637 aa19.9■□□□□ 0.78
SPDL1-206ENST00000507232 TOP2BQ02880 1626 aa19.89■□□□□ 0.77
SPDL1-206ENST00000507232 NCAPD3P42695 1498 aa19.88■□□□□ 0.77
SPDL1-206ENST00000507232 CLIP1P30622 1438 aa19.87■□□□□ 0.77
SPDL1-206ENST00000507232 HMGXB3Q12766 1538 aa19.85■□□□□ 0.77
SPDL1-206ENST00000507232 BIVM-ERCC5R4GMW8 1640 aa19.81■□□□□ 0.76
SPDL1-206ENST00000507232 CUX1P39880 1505 aa19.79■□□□□ 0.76
SPDL1-206ENST00000507232 HNRNPUL2Q1KMD3 747 aaKnown RBP19.76■□□□□ 0.75
SPDL1-206ENST00000507232 VPS8Q8N3P4 1428 aa19.72■□□□□ 0.75
SPDL1-206ENST00000507232 CFTRP13569 1480 aa19.71■□□□□ 0.75
SPDL1-206ENST00000507232 APLP2Q06481 763 aa19.7■□□□□ 0.74
SPDL1-206ENST00000507232 PRXQ9BXM0 1461 aa19.65■□□□□ 0.74
SPDL1-206ENST00000507232 KIF27Q86VH2 1401 aa19.62■□□□□ 0.73
SPDL1-206ENST00000507232 ERICH3Q5RHP9 1530 aa19.59■□□□□ 0.73
SPDL1-206ENST00000507232 CC2D2AQ9P2K1 1620 aa19.58■□□□□ 0.73
SPDL1-206ENST00000507232 ARAP1Q96P48 1450 aa19.57■□□□□ 0.72
SPDL1-206ENST00000507232 CADPSQ9ULU8 1353 aa19.56■□□□□ 0.72
SPDL1-206ENST00000507232 CUX2O14529 1486 aa19.53■□□□□ 0.72
SPDL1-206ENST00000507232 KANK4Q5T7N3 995 aaPredicted RBP19.53■□□□□ 0.72
SPDL1-206ENST00000507232 PRDM2Q13029 1718 aa19.53■□□□□ 0.72
SPDL1-206ENST00000507232 DIEXFQ68CQ4 756 aaKnown RBP19.48■□□□□ 0.71
SPDL1-206ENST00000507232 FGD5Q6ZNL6 1462 aa19.47■□□□□ 0.71
SPDL1-206ENST00000507232 IGF1RP08069 1367 aa19.45■□□□□ 0.7
SPDL1-206ENST00000507232 ARHGAP35Q9NRY4 1499 aa19.42■□□□□ 0.7
SPDL1-206ENST00000507232 NESP48681 1621 aa19.41■□□□□ 0.7
SPDL1-206ENST00000507232 FANCD2Q9BXW9 1451 aa19.41■□□□□ 0.7
SPDL1-206ENST00000507232 CARMIL1Q5VZK9 1371 aa19.37■□□□□ 0.69
SPDL1-206ENST00000507232 SCAF1Q9H7N4 1312 aaKnown RBP19.36■□□□□ 0.69
SPDL1-206ENST00000507232 P3H3Q8IVL6 736 aa19.36■□□□□ 0.69
SPDL1-206ENST00000507232 ITGAEP38570 1179 aa19.36■□□□□ 0.69
SPDL1-206ENST00000507232 RAD54L2Q9Y4B4 1467 aa19.36■□□□□ 0.69
SPDL1-206ENST00000507232 ZNF316A6NFI3 1004 aaPredicted RBP19.35■□□□□ 0.69
SPDL1-206ENST00000507232 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
SPDL1-206ENST00000507232 ATP1B4Q9UN42 357 aaPredicted RBP19.28■□□□□ 0.68
SPDL1-206ENST00000507232 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
SPDL1-206ENST00000507232 POLA1P09884 1462 aaPredicted RBP19.24■□□□□ 0.67
SPDL1-206ENST00000507232 DNMBPQ6XZF7 1577 aa19.24■□□□□ 0.67
SPDL1-206ENST00000507232 NEUROD1Q13562 356 aa19.24■□□□□ 0.67
SPDL1-206ENST00000507232 DHX57Q6P158 1386 aaKnown RBP19.22■□□□□ 0.67
SPDL1-206ENST00000507232 RRBP1Q9P2E9 1410 aaKnown RBP19.21■□□□□ 0.67
SPDL1-206ENST00000507232 CCNB3Q8WWL7 1395 aa19.2■□□□□ 0.66
SPDL1-206ENST00000507232 ACIN1Q9UKV3 1341 aaKnown RBP19.18■□□□□ 0.66
SPDL1-206ENST00000507232 YTHDC1Q96MU7 727 aaKnown RBP19.16■□□□□ 0.66
SPDL1-206ENST00000507232 ABCA10Q8WWZ4 1543 aa19.16■□□□□ 0.66
SPDL1-206ENST00000507232 TIAM1Q13009 1591 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms