RNA–Protein interactions for RNA: ENST00000506422.1

ETFDH-203, Transcript of electron transfer flavoprotein dehydrogenase, humanhuman

TSL 1 (best)

Gene ETFDH, Length 865 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFDH-203ENST00000506422 AEBP2Q6ZN18 517 aaPredicted RBP28.17■■■□□ 2.1
ETFDH-203ENST00000506422 CHIC1Q5VXU3 224 aa26.61■■□□□ 1.85
ETFDH-203ENST00000506422 SENP3Q9H4L4 574 aaPredicted RBP24.04■■□□□ 1.44
ETFDH-203ENST00000506422 PHF23Q9BUL5 403 aaPredicted RBP23.71■■□□□ 1.39
ETFDH-203ENST00000506422 NISCHQ9Y2I1 1504 aa22.79■■□□□ 1.24
ETFDH-203ENST00000506422 FOXD1Q16676 465 aa22.43■■□□□ 1.18
ETFDH-203ENST00000506422 PLPPR3Q6T4P5 718 aa21.19■□□□□ 0.98
ETFDH-203ENST00000506422 MSH5O43196 834 aa21.03■□□□□ 0.96
ETFDH-203ENST00000506422 PIAS4Q8N2W9 510 aaPredicted RBP20.93■□□□□ 0.94
ETFDH-203ENST00000506422 PPP6R1Q9UPN7 881 aa20.88■□□□□ 0.93
ETFDH-203ENST00000506422 ADRA2BP18089 450 aa20.81■□□□□ 0.92
ETFDH-203ENST00000506422 POTEDQ86YR6 584 aa20.77■□□□□ 0.92
ETFDH-203ENST00000506422 ABCC9O60706 1549 aa20.51■□□□□ 0.87
ETFDH-203ENST00000506422 CCDC180Q9P1Z9 1646 aa20.31■□□□□ 0.84
ETFDH-203ENST00000506422 DCAF8L2P0C7V8 631 aa19.64■□□□□ 0.73
ETFDH-203ENST00000506422 RB1CC1Q8TDY2 1594 aa19.47■□□□□ 0.71
ETFDH-203ENST00000506422 NACADO15069 1562 aa19.32■□□□□ 0.68
ETFDH-203ENST00000506422 PABPN1Q86U42 306 aaKnown RBP eCLIP19.22■□□□□ 0.67
ETFDH-203ENST00000506422 DNAJC5BQ9UF47 199 aa19.21■□□□□ 0.67
ETFDH-203ENST00000506422 MAPK8IP2Q13387 824 aaPredicted RBP19.15■□□□□ 0.66
ETFDH-203ENST00000506422 DMRT2Q9Y5R5 561 aa19.04■□□□□ 0.64
ETFDH-203ENST00000506422 SCAF1Q9H7N4 1312 aaKnown RBP19.01■□□□□ 0.63
ETFDH-203ENST00000506422 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
ETFDH-203ENST00000506422 ZCCHC6Q5VYS8 1495 aaKnown RBP18.84■□□□□ 0.61
ETFDH-203ENST00000506422 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.6
ETFDH-203ENST00000506422 BICRAQ9NZM4 1560 aa18.76■□□□□ 0.59
ETFDH-203ENST00000506422 DCAF1Q9Y4B6 1507 aa18.76■□□□□ 0.59
ETFDH-203ENST00000506422 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
ETFDH-203ENST00000506422 PPP4R3CPQ6ZMV5 832 aa18.57■□□□□ 0.56
ETFDH-203ENST00000506422 SHROOM4Q9ULL8 1493 aa18.57■□□□□ 0.56
ETFDH-203ENST00000506422 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.55
ETFDH-203ENST00000506422 CC2D2AQ9P2K1 1620 aa18.43■□□□□ 0.54
ETFDH-203ENST00000506422 EIF4G1Q04637 1599 aaKnown RBP18.39■□□□□ 0.53
ETFDH-203ENST00000506422 DCAF8L1A6NGE4 600 aa18.29■□□□□ 0.52
ETFDH-203ENST00000506422 HOXD11P31277 338 aaPredicted RBP18.28■□□□□ 0.52
ETFDH-203ENST00000506422 CNKSR2Q8WXI2 1034 aa18.25■□□□□ 0.51
ETFDH-203ENST00000506422 CACNB1Q02641 598 aaPredicted RBP18.14■□□□□ 0.49
ETFDH-203ENST00000506422 RNF216Q9NWF9 866 aaPredicted RBP18.12■□□□□ 0.49
ETFDH-203ENST00000506422 RNF39Q9H2S5 420 aa17.94■□□□□ 0.46
ETFDH-203ENST00000506422 NCAPD3P42695 1498 aa17.86■□□□□ 0.45
ETFDH-203ENST00000506422 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
ETFDH-203ENST00000506422 NCBP3Q53F19 620 aaKnown RBP17.8■□□□□ 0.44
ETFDH-203ENST00000506422 ERCC6Q03468 1493 aa17.78■□□□□ 0.44
ETFDH-203ENST00000506422 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
ETFDH-203ENST00000506422 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
ETFDH-203ENST00000506422 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
ETFDH-203ENST00000506422 DNAJC5Q9H3Z4 198 aa17.69■□□□□ 0.42
ETFDH-203ENST00000506422 BAZ1BQ9UIG0 1483 aaKnown RBP17.69■□□□□ 0.42
ETFDH-203ENST00000506422 C1QBPQ07021 282 aaKnown RBP17.66■□□□□ 0.42
ETFDH-203ENST00000506422 HMGXB3Q12766 1538 aa17.65■□□□□ 0.42
ETFDH-203ENST00000506422 CUX2O14529 1486 aa17.61■□□□□ 0.41
ETFDH-203ENST00000506422 NESP48681 1621 aa17.56■□□□□ 0.4
ETFDH-203ENST00000506422 MROH2BQ7Z745 1585 aa17.55■□□□□ 0.4
ETFDH-203ENST00000506422 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
ETFDH-203ENST00000506422 PEG3Q9GZU2 1588 aa17.5■□□□□ 0.39
ETFDH-203ENST00000506422 PDS5BQ9NTI5 1447 aa17.46■□□□□ 0.39
ETFDH-203ENST00000506422 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.38
ETFDH-203ENST00000506422 LAMC3Q9Y6N6 1575 aa17.42■□□□□ 0.38
ETFDH-203ENST00000506422 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
ETFDH-203ENST00000506422 WIZO95785 1651 aa17.32■□□□□ 0.36
ETFDH-203ENST00000506422 RSF1Q96T23 1441 aaPredicted RBP17.25■□□□□ 0.35
ETFDH-203ENST00000506422 THOC2Q8NI27 1593 aaKnown RBP17.24■□□□□ 0.35
ETFDH-203ENST00000506422 KIF21AQ7Z4S6 1674 aa17.23■□□□□ 0.35
ETFDH-203ENST00000506422 MRC2Q9UBG0 1479 aa17.21■□□□□ 0.35
ETFDH-203ENST00000506422 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
ETFDH-203ENST00000506422 FANCD2Q9BXW9 1451 aa17.16■□□□□ 0.34
ETFDH-203ENST00000506422 CFTRP13569 1480 aa17.12■□□□□ 0.33
ETFDH-203ENST00000506422 TOP2AP11388 1531 aaKnown RBP17.11■□□□□ 0.33
ETFDH-203ENST00000506422 KCNA4P22459 653 aa17.11■□□□□ 0.33
ETFDH-203ENST00000506422 WDR62O43379 1518 aa17.08■□□□□ 0.32
ETFDH-203ENST00000506422 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
ETFDH-203ENST00000506422 U3KPZ7 1027 aaPredicted RBP17.06■□□□□ 0.32
ETFDH-203ENST00000506422 OSCARQ8IYS5 282 aa17.02■□□□□ 0.32
ETFDH-203ENST00000506422 CCDC88BA6NC98 1476 aa16.99■□□□□ 0.31
ETFDH-203ENST00000506422 URB2Q14146 1524 aaKnown RBP16.94■□□□□ 0.3
ETFDH-203ENST00000506422 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
ETFDH-203ENST00000506422 ABCC8Q09428 1581 aa16.84■□□□□ 0.29
ETFDH-203ENST00000506422 CAPN15O75808 1086 aa16.83■□□□□ 0.28
ETFDH-203ENST00000506422 IFT140Q96RY7 1462 aa16.83■□□□□ 0.28
ETFDH-203ENST00000506422 SLC4A2P04920 1241 aa16.8■□□□□ 0.28
ETFDH-203ENST00000506422 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
ETFDH-203ENST00000506422 FBLN2P98095 1184 aa16.79■□□□□ 0.28
ETFDH-203ENST00000506422 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
ETFDH-203ENST00000506422 SUPT5HO00267 1087 aaKnown RBP16.77■□□□□ 0.28
ETFDH-203ENST00000506422 ZNF608Q9ULD9 1512 aaPredicted RBP16.76■□□□□ 0.27
ETFDH-203ENST00000506422 DSG3P32926 999 aa16.76■□□□□ 0.27
ETFDH-203ENST00000506422 DNMBPQ6XZF7 1577 aa16.7■□□□□ 0.26
ETFDH-203ENST00000506422 AQRO60306 1485 aaKnown RBP eCLIP16.69■□□□□ 0.26
ETFDH-203ENST00000506422 SOGA1O94964 1423 aa16.67■□□□□ 0.26
ETFDH-203ENST00000506422 CYB5RLQ6IPT4 315 aa16.65■□□□□ 0.26
ETFDH-203ENST00000506422 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.25
ETFDH-203ENST00000506422 POLA1P09884 1462 aaPredicted RBP16.62■□□□□ 0.25
ETFDH-203ENST00000506422 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
ETFDH-203ENST00000506422 RAD54L2Q9Y4B4 1467 aa16.61■□□□□ 0.25
ETFDH-203ENST00000506422 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
ETFDH-203ENST00000506422 TARBP1Q13395 1621 aaKnown RBP16.56■□□□□ 0.24
ETFDH-203ENST00000506422 TRHP20396 242 aaPredicted RBP16.54■□□□□ 0.24
ETFDH-203ENST00000506422 APLP2Q06481 763 aa16.54■□□□□ 0.24
ETFDH-203ENST00000506422 RIMBP3CA6NJZ7 1639 aa16.54■□□□□ 0.24
ETFDH-203ENST00000506422 RIMBP3BA6NNM3 1639 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 178.9 ms