RNA–Protein interactions for RNA: ENST00000504665.5

LINC00964-201, long intergenic non-protein coding RNA 964, humanhuman

TSL 2

Gene LINC00964, Length 2,203 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00964-201ENST00000504665 NISCHQ9Y2I1 1504 aa15.19■□□□□ 0.02
LINC00964-201ENST00000504665 AEBP2Q6ZN18 517 aaPredicted RBP14.04□□□□□ -0.16
LINC00964-201ENST00000504665 CHIC1Q5VXU3 224 aa13.37□□□□□ -0.27
LINC00964-201ENST00000504665 CCDC180Q9P1Z9 1646 aa13.06□□□□□ -0.32
LINC00964-201ENST00000504665 ZCCHC6Q5VYS8 1495 aaKnown RBP12.9□□□□□ -0.34
LINC00964-201ENST00000504665 SHROOM4Q9ULL8 1493 aa12.71□□□□□ -0.38
LINC00964-201ENST00000504665 DCAF1Q9Y4B6 1507 aa12.59□□□□□ -0.39
LINC00964-201ENST00000504665 SUPT5HO00267 1087 aaKnown RBP12.48□□□□□ -0.41
LINC00964-201ENST00000504665 MYO15BQ96JP2 1530 aa12.33□□□□□ -0.44
LINC00964-201ENST00000504665 SENP3Q9H4L4 574 aaPredicted RBP12.29□□□□□ -0.44
LINC00964-201ENST00000504665 ABCC9O60706 1549 aa12.22□□□□□ -0.45
LINC00964-201ENST00000504665 DCAF8L2P0C7V8 631 aa12.18□□□□□ -0.46
LINC00964-201ENST00000504665 HRCP23327 699 aa12.08□□□□□ -0.48
LINC00964-201ENST00000504665 SCRIBQ14160 1630 aa12.02□□□□□ -0.48
LINC00964-201ENST00000504665 RSF1Q96T23 1441 aaPredicted RBP11.98□□□□□ -0.49
LINC00964-201ENST00000504665 PHF23Q9BUL5 403 aaPredicted RBP11.96□□□□□ -0.49
LINC00964-201ENST00000504665 RB1CC1Q8TDY2 1594 aa11.96□□□□□ -0.49
LINC00964-201ENST00000504665 NACADO15069 1562 aa11.95□□□□□ -0.5
LINC00964-201ENST00000504665 PCGF6Q9BYE7 350 aa11.9□□□□□ -0.51
LINC00964-201ENST00000504665 LOC105371045A0A1W2PR82 267 aa11.82□□□□□ -0.52
LINC00964-201ENST00000504665 TRIM26Q12899 539 aaPredicted RBP11.78□□□□□ -0.52
LINC00964-201ENST00000504665 BAZ1AQ9NRL2 1556 aaPredicted RBP11.76□□□□□ -0.53
LINC00964-201ENST00000504665 MROH2BQ7Z745 1585 aa11.75□□□□□ -0.53
LINC00964-201ENST00000504665 EIF4G1Q04637 1599 aaKnown RBP11.74□□□□□ -0.53
LINC00964-201ENST00000504665 CECR2Q9BXF3 1484 aa11.73□□□□□ -0.53
LINC00964-201ENST00000504665 WIZO95785 1651 aa11.73□□□□□ -0.53
LINC00964-201ENST00000504665 TRIM41Q8WV44 630 aa11.7□□□□□ -0.54
LINC00964-201ENST00000504665 PPARGC1BQ86YN6 1023 aaKnown RBP11.66□□□□□ -0.54
LINC00964-201ENST00000504665 UNC13AQ9UPW8 1703 aa11.64□□□□□ -0.55
LINC00964-201ENST00000504665 ZEB1P37275 1124 aaPredicted RBP11.62□□□□□ -0.55
LINC00964-201ENST00000504665 TOP2AP11388 1531 aaKnown RBP11.6□□□□□ -0.55
LINC00964-201ENST00000504665 SMARCA4P51532 1647 aa11.59□□□□□ -0.55
LINC00964-201ENST00000504665 SMARCA2P51531 1590 aa11.53□□□□□ -0.56
LINC00964-201ENST00000504665 POTEDQ86YR6 584 aa11.5□□□□□ -0.57
LINC00964-201ENST00000504665 FAM9AQ8IZU1 332 aaPredicted RBP11.48□□□□□ -0.57
LINC00964-201ENST00000504665 CCDC88BA6NC98 1476 aa11.46□□□□□ -0.58
LINC00964-201ENST00000504665 PEG3Q9GZU2 1588 aa11.44□□□□□ -0.58
LINC00964-201ENST00000504665 WRNQ14191 1432 aaPredicted RBP eCLIP11.44□□□□□ -0.58
LINC00964-201ENST00000504665 ABCC8Q09428 1581 aa11.43□□□□□ -0.58
LINC00964-201ENST00000504665 EEA1Q15075 1411 aa11.41□□□□□ -0.58
LINC00964-201ENST00000504665 BICRAQ9NZM4 1560 aa11.39□□□□□ -0.59
LINC00964-201ENST00000504665 FOXD1Q16676 465 aa11.37□□□□□ -0.59
LINC00964-201ENST00000504665 TNIKQ9UKE5 1360 aa11.34□□□□□ -0.59
LINC00964-201ENST00000504665 CEP162Q5TB80 1403 aa11.33□□□□□ -0.6
LINC00964-201ENST00000504665 KIF21BO75037 1637 aa11.3□□□□□ -0.6
LINC00964-201ENST00000504665 SOGA1O94964 1423 aa11.29□□□□□ -0.6
LINC00964-201ENST00000504665 GOLGA3Q08378 1498 aa11.28□□□□□ -0.6
LINC00964-201ENST00000504665 EHMT2Q96KQ7 1210 aa11.27□□□□□ -0.61
LINC00964-201ENST00000504665 SYNJ1O43426 1573 aa11.24□□□□□ -0.61
LINC00964-201ENST00000504665 RUSC2Q8N2Y8 1516 aa11.23□□□□□ -0.61
LINC00964-201ENST00000504665 CSRNP3Q8WYN3 585 aa11.22□□□□□ -0.61
LINC00964-201ENST00000504665 CEP164Q9UPV0 1460 aa11.21□□□□□ -0.61
LINC00964-201ENST00000504665 BAZ1BQ9UIG0 1483 aaKnown RBP11.2□□□□□ -0.62
LINC00964-201ENST00000504665 ATAD2BQ9ULI0 1458 aa11.19□□□□□ -0.62
LINC00964-201ENST00000504665 CCER1Q8TC90 406 aaPredicted RBP11.18□□□□□ -0.62
LINC00964-201ENST00000504665 BIVM-ERCC5R4GMW8 1640 aa11.18□□□□□ -0.62
LINC00964-201ENST00000504665 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.17□□□□□ -0.62
LINC00964-201ENST00000504665 TOP2BQ02880 1626 aa11.15□□□□□ -0.62
LINC00964-201ENST00000504665 PELP1Q8IZL8 1130 aaKnown RBP11.13□□□□□ -0.63
LINC00964-201ENST00000504665 SCAF1Q9H7N4 1312 aaKnown RBP11.12□□□□□ -0.63
LINC00964-201ENST00000504665 VPS8Q8N3P4 1428 aa11.1□□□□□ -0.63
LINC00964-201ENST00000504665 ERICH3Q5RHP9 1530 aa11.1□□□□□ -0.63
LINC00964-201ENST00000504665 UBTFP17480 764 aaKnown RBP11.09□□□□□ -0.63
LINC00964-201ENST00000504665 CLIP1P30622 1438 aa11.08□□□□□ -0.63
LINC00964-201ENST00000504665 HMGXB3Q12766 1538 aa11.08□□□□□ -0.64
LINC00964-201ENST00000504665 PABPN1Q86U42 306 aaKnown RBP eCLIP11.08□□□□□ -0.64
LINC00964-201ENST00000504665 PRDM2Q13029 1718 aa11.07□□□□□ -0.64
LINC00964-201ENST00000504665 RAPGEF2Q9Y4G8 1499 aa11.05□□□□□ -0.64
LINC00964-201ENST00000504665 ACIN1Q9UKV3 1341 aaKnown RBP11.03□□□□□ -0.64
LINC00964-201ENST00000504665 DIEXFQ68CQ4 756 aaKnown RBP11.03□□□□□ -0.64
LINC00964-201ENST00000504665 MSH5O43196 834 aa11.03□□□□□ -0.64
LINC00964-201ENST00000504665 PRXQ9BXM0 1461 aa11.01□□□□□ -0.65
LINC00964-201ENST00000504665 NCAPD3P42695 1498 aa11□□□□□ -0.65
LINC00964-201ENST00000504665 ZNF316A6NFI3 1004 aaPredicted RBP10.97□□□□□ -0.65
LINC00964-201ENST00000504665 TTBK1Q5TCY1 1321 aaPredicted RBP10.97□□□□□ -0.65
LINC00964-201ENST00000504665 CENPBP07199 599 aaPredicted RBP10.97□□□□□ -0.65
LINC00964-201ENST00000504665 CUX1P39880 1505 aa10.96□□□□□ -0.65
LINC00964-201ENST00000504665 NEUROD1Q13562 356 aa10.96□□□□□ -0.66
LINC00964-201ENST00000504665 ARAP1Q96P48 1450 aa10.95□□□□□ -0.66
LINC00964-201ENST00000504665 CFTRP13569 1480 aa10.92□□□□□ -0.66
LINC00964-201ENST00000504665 CLSPNQ9HAW4 1339 aa10.92□□□□□ -0.66
LINC00964-201ENST00000504665 KIF27Q86VH2 1401 aa10.9□□□□□ -0.66
LINC00964-201ENST00000504665 APLP2Q06481 763 aa10.9□□□□□ -0.66
LINC00964-201ENST00000504665 CUX2O14529 1486 aa10.89□□□□□ -0.67
LINC00964-201ENST00000504665 RRBP1Q9P2E9 1410 aaKnown RBP10.88□□□□□ -0.67
LINC00964-201ENST00000504665 HNRNPUL2Q1KMD3 747 aaKnown RBP10.86□□□□□ -0.67
LINC00964-201ENST00000504665 MAP3K1Q13233 1512 aa10.86□□□□□ -0.67
LINC00964-201ENST00000504665 GTF3C3Q9Y5Q9 886 aa10.84□□□□□ -0.67
LINC00964-201ENST00000504665 ARHGAP35Q9NRY4 1499 aa10.84□□□□□ -0.67
LINC00964-201ENST00000504665 DHX57Q6P158 1386 aaKnown RBP10.83□□□□□ -0.68
LINC00964-201ENST00000504665 CFAP43Q8NDM7 1665 aa10.8□□□□□ -0.68
LINC00964-201ENST00000504665 TIAM1Q13009 1591 aa10.8□□□□□ -0.68
LINC00964-201ENST00000504665 MIER1Q8N108 512 aa10.76□□□□□ -0.69
LINC00964-201ENST00000504665 CCNB3Q8WWL7 1395 aa10.75□□□□□ -0.69
LINC00964-201ENST00000504665 KANK4Q5T7N3 995 aaPredicted RBP10.75□□□□□ -0.69
LINC00964-201ENST00000504665 FGD5Q6ZNL6 1462 aa10.73□□□□□ -0.69
LINC00964-201ENST00000504665 IGF1RP08069 1367 aa10.73□□□□□ -0.69
LINC00964-201ENST00000504665 CC2D2AQ9P2K1 1620 aa10.72□□□□□ -0.69
LINC00964-201ENST00000504665 CTTNBP2Q8WZ74 1663 aa10.72□□□□□ -0.69
LINC00964-201ENST00000504665 CADPSQ9ULU8 1353 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms