RNA–Protein interactions for RNA: ENST00000503963.1

PDE8B-207, Transcript of phosphodiesterase 8B, humanhuman

TSL 4

Gene PDE8B, Length 574 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-207ENST00000503963 AEBP2Q6ZN18 517 aaPredicted RBP16.97■□□□□ 0.31
PDE8B-207ENST00000503963 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
PDE8B-207ENST00000503963 NISCHQ9Y2I1 1504 aa15.33■□□□□ 0.04
PDE8B-207ENST00000503963 SENP3Q9H4L4 574 aaPredicted RBP14.53□□□□□ -0.08
PDE8B-207ENST00000503963 PHF23Q9BUL5 403 aaPredicted RBP14.37□□□□□ -0.11
PDE8B-207ENST00000503963 FOXD1Q16676 465 aa13.47□□□□□ -0.25
PDE8B-207ENST00000503963 CCDC180Q9P1Z9 1646 aa13.28□□□□□ -0.28
PDE8B-207ENST00000503963 PLPPR3Q6T4P5 718 aa13.23□□□□□ -0.29
PDE8B-207ENST00000503963 ZCCHC6Q5VYS8 1495 aaKnown RBP12.95□□□□□ -0.34
PDE8B-207ENST00000503963 DCAF1Q9Y4B6 1507 aa12.77□□□□□ -0.37
PDE8B-207ENST00000503963 ADRA2BP18089 450 aa12.76□□□□□ -0.37
PDE8B-207ENST00000503963 PPP6R1Q9UPN7 881 aa12.75□□□□□ -0.37
PDE8B-207ENST00000503963 PIAS4Q8N2W9 510 aaPredicted RBP12.7□□□□□ -0.38
PDE8B-207ENST00000503963 MSH5O43196 834 aa12.59□□□□□ -0.39
PDE8B-207ENST00000503963 MYO15BQ96JP2 1530 aa12.55□□□□□ -0.4
PDE8B-207ENST00000503963 SHROOM4Q9ULL8 1493 aa12.47□□□□□ -0.41
PDE8B-207ENST00000503963 DCAF8L2P0C7V8 631 aa12.33□□□□□ -0.44
PDE8B-207ENST00000503963 NACADO15069 1562 aa12.3□□□□□ -0.44
PDE8B-207ENST00000503963 ABCC9O60706 1549 aa12.18□□□□□ -0.46
PDE8B-207ENST00000503963 SUPT5HO00267 1087 aaKnown RBP12.13□□□□□ -0.47
PDE8B-207ENST00000503963 SCRIBQ14160 1630 aa12.12□□□□□ -0.47
PDE8B-207ENST00000503963 RB1CC1Q8TDY2 1594 aa12.1□□□□□ -0.47
PDE8B-207ENST00000503963 RSF1Q96T23 1441 aaPredicted RBP11.96□□□□□ -0.49
PDE8B-207ENST00000503963 POTEDQ86YR6 584 aa11.86□□□□□ -0.51
PDE8B-207ENST00000503963 CECR2Q9BXF3 1484 aa11.83□□□□□ -0.52
PDE8B-207ENST00000503963 UNC13AQ9UPW8 1703 aa11.82□□□□□ -0.52
PDE8B-207ENST00000503963 MROH2BQ7Z745 1585 aa11.81□□□□□ -0.52
PDE8B-207ENST00000503963 BAZ1AQ9NRL2 1556 aaPredicted RBP11.81□□□□□ -0.52
PDE8B-207ENST00000503963 SCAF1Q9H7N4 1312 aaKnown RBP11.78□□□□□ -0.52
PDE8B-207ENST00000503963 BICRAQ9NZM4 1560 aa11.74□□□□□ -0.53
PDE8B-207ENST00000503963 SMARCA4P51532 1647 aa11.71□□□□□ -0.54
PDE8B-207ENST00000503963 WIZO95785 1651 aa11.69□□□□□ -0.54
PDE8B-207ENST00000503963 TOP2AP11388 1531 aaKnown RBP11.65□□□□□ -0.54
PDE8B-207ENST00000503963 MAPK8IP2Q13387 824 aaPredicted RBP11.65□□□□□ -0.54
PDE8B-207ENST00000503963 PEG3Q9GZU2 1588 aa11.64□□□□□ -0.55
PDE8B-207ENST00000503963 PPP4R3CPQ6ZMV5 832 aa11.62□□□□□ -0.55
PDE8B-207ENST00000503963 EIF4G1Q04637 1599 aaKnown RBP11.59□□□□□ -0.55
PDE8B-207ENST00000503963 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
PDE8B-207ENST00000503963 DMRT2Q9Y5R5 561 aa11.52□□□□□ -0.57
PDE8B-207ENST00000503963 CCDC88BA6NC98 1476 aa11.51□□□□□ -0.57
PDE8B-207ENST00000503963 PABPN1Q86U42 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
PDE8B-207ENST00000503963 ATAD2BQ9ULI0 1458 aa11.46□□□□□ -0.57
PDE8B-207ENST00000503963 TRIM41Q8WV44 630 aa11.46□□□□□ -0.57
PDE8B-207ENST00000503963 BAZ1BQ9UIG0 1483 aaKnown RBP11.38□□□□□ -0.59
PDE8B-207ENST00000503963 HMGXB3Q12766 1538 aa11.37□□□□□ -0.59
PDE8B-207ENST00000503963 CNKSR2Q8WXI2 1034 aa11.36□□□□□ -0.59
PDE8B-207ENST00000503963 NCAPD3P42695 1498 aa11.36□□□□□ -0.59
PDE8B-207ENST00000503963 LOC105371045A0A1W2PR82 267 aa11.32□□□□□ -0.6
PDE8B-207ENST00000503963 NCBP3Q53F19 620 aaKnown RBP11.31□□□□□ -0.6
PDE8B-207ENST00000503963 EEA1Q15075 1411 aa11.28□□□□□ -0.6
PDE8B-207ENST00000503963 ABCC8Q09428 1581 aa11.28□□□□□ -0.6
PDE8B-207ENST00000503963 WRNQ14191 1432 aaPredicted RBP eCLIP11.24□□□□□ -0.61
PDE8B-207ENST00000503963 DCAF8L1A6NGE4 600 aa11.18□□□□□ -0.62
PDE8B-207ENST00000503963 RNF216Q9NWF9 866 aaPredicted RBP11.18□□□□□ -0.62
PDE8B-207ENST00000503963 SYNJ1O43426 1573 aa11.17□□□□□ -0.62
PDE8B-207ENST00000503963 HOXD11P31277 338 aaPredicted RBP11.17□□□□□ -0.62
PDE8B-207ENST00000503963 CFTRP13569 1480 aa11.16□□□□□ -0.62
PDE8B-207ENST00000503963 TOP2BQ02880 1626 aa11.15□□□□□ -0.62
PDE8B-207ENST00000503963 BIVM-ERCC5R4GMW8 1640 aa11.14□□□□□ -0.63
PDE8B-207ENST00000503963 FAM9AQ8IZU1 332 aaPredicted RBP11.14□□□□□ -0.63
PDE8B-207ENST00000503963 SOGA1O94964 1423 aa11.14□□□□□ -0.63
PDE8B-207ENST00000503963 TNIKQ9UKE5 1360 aa11.11□□□□□ -0.63
PDE8B-207ENST00000503963 PRDM2Q13029 1718 aa11.1□□□□□ -0.63
PDE8B-207ENST00000503963 CSRNP3Q8WYN3 585 aa11.1□□□□□ -0.63
PDE8B-207ENST00000503963 KIF21BO75037 1637 aa11.09□□□□□ -0.63
PDE8B-207ENST00000503963 TRIM26Q12899 539 aaPredicted RBP11.09□□□□□ -0.63
PDE8B-207ENST00000503963 CC2D2AQ9P2K1 1620 aa11.09□□□□□ -0.63
PDE8B-207ENST00000503963 GOLGA3Q08378 1498 aa11.07□□□□□ -0.64
PDE8B-207ENST00000503963 RUSC2Q8N2Y8 1516 aa11.07□□□□□ -0.64
PDE8B-207ENST00000503963 CEP164Q9UPV0 1460 aa11.06□□□□□ -0.64
PDE8B-207ENST00000503963 PCGF6Q9BYE7 350 aa11.05□□□□□ -0.64
PDE8B-207ENST00000503963 CADPSQ9ULU8 1353 aa11.04□□□□□ -0.64
PDE8B-207ENST00000503963 NPM3O75607 178 aaKnown RBP11.04□□□□□ -0.64
PDE8B-207ENST00000503963 HRCP23327 699 aa11.04□□□□□ -0.64
PDE8B-207ENST00000503963 CUX1P39880 1505 aa11.04□□□□□ -0.64
PDE8B-207ENST00000503963 KCNA4P22459 653 aa11.03□□□□□ -0.64
PDE8B-207ENST00000503963 CEP162Q5TB80 1403 aa11.02□□□□□ -0.64
PDE8B-207ENST00000503963 ERICH3Q5RHP9 1530 aa10.99□□□□□ -0.65
PDE8B-207ENST00000503963 PRXQ9BXM0 1461 aa10.97□□□□□ -0.65
PDE8B-207ENST00000503963 KIF27Q86VH2 1401 aa10.94□□□□□ -0.66
PDE8B-207ENST00000503963 RAPGEF2Q9Y4G8 1499 aa10.92□□□□□ -0.66
PDE8B-207ENST00000503963 LAMC3Q9Y6N6 1575 aa10.91□□□□□ -0.66
PDE8B-207ENST00000503963 FANCD2Q9BXW9 1451 aa10.9□□□□□ -0.66
PDE8B-207ENST00000503963 UBTFP17480 764 aaKnown RBP10.89□□□□□ -0.67
PDE8B-207ENST00000503963 DNMBPQ6XZF7 1577 aa10.88□□□□□ -0.67
PDE8B-207ENST00000503963 EHMT2Q96KQ7 1210 aa10.88□□□□□ -0.67
PDE8B-207ENST00000503963 CLIP1P30622 1438 aa10.87□□□□□ -0.67
PDE8B-207ENST00000503963 FGD5Q6ZNL6 1462 aa10.86□□□□□ -0.67
PDE8B-207ENST00000503963 VPS8Q8N3P4 1428 aa10.85□□□□□ -0.67
PDE8B-207ENST00000503963 ABCA10Q8WWZ4 1543 aa10.83□□□□□ -0.68
PDE8B-207ENST00000503963 TOPBP1Q92547 1522 aa10.83□□□□□ -0.68
PDE8B-207ENST00000503963 CUX2O14529 1486 aa10.82□□□□□ -0.68
PDE8B-207ENST00000503963 IGF1RP08069 1367 aa10.82□□□□□ -0.68
PDE8B-207ENST00000503963 ZEB1P37275 1124 aaPredicted RBP10.82□□□□□ -0.68
PDE8B-207ENST00000503963 PDS5BQ9NTI5 1447 aa10.79□□□□□ -0.68
PDE8B-207ENST00000503963 NESP48681 1621 aa10.79□□□□□ -0.68
PDE8B-207ENST00000503963 POLA1P09884 1462 aaPredicted RBP10.78□□□□□ -0.68
PDE8B-207ENST00000503963 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.77□□□□□ -0.69
PDE8B-207ENST00000503963 ARAP1Q96P48 1450 aa10.76□□□□□ -0.69
PDE8B-207ENST00000503963 WDR97A6NE52 1622 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms