RNA–Protein interactions for RNA: ENST00000502479.1

LINC00939-201, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best) BASIC

Gene LINC00939, Length 4,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-201ENST00000502479 NISCHQ9Y2I1 1504 aa13.35□□□□□ -0.27
LINC00939-201ENST00000502479 CCDC180Q9P1Z9 1646 aa11.69□□□□□ -0.54
LINC00939-201ENST00000502479 ZCCHC6Q5VYS8 1495 aaKnown RBP11.3□□□□□ -0.6
LINC00939-201ENST00000502479 DCAF1Q9Y4B6 1507 aa11.18□□□□□ -0.62
LINC00939-201ENST00000502479 SHROOM4Q9ULL8 1493 aa10.97□□□□□ -0.65
LINC00939-201ENST00000502479 MYO15BQ96JP2 1530 aa10.94□□□□□ -0.66
LINC00939-201ENST00000502479 DCAF8L2P0C7V8 631 aa10.85□□□□□ -0.67
LINC00939-201ENST00000502479 SUPT5HO00267 1087 aaKnown RBP10.79□□□□□ -0.68
LINC00939-201ENST00000502479 NACADO15069 1562 aa10.77□□□□□ -0.68
LINC00939-201ENST00000502479 ABCC9O60706 1549 aa10.7□□□□□ -0.7
LINC00939-201ENST00000502479 RB1CC1Q8TDY2 1594 aa10.62□□□□□ -0.71
LINC00939-201ENST00000502479 SCRIBQ14160 1630 aa10.61□□□□□ -0.71
LINC00939-201ENST00000502479 CHIC1Q5VXU3 224 aa10.48□□□□□ -0.73
LINC00939-201ENST00000502479 RSF1Q96T23 1441 aaPredicted RBP10.41□□□□□ -0.74
LINC00939-201ENST00000502479 BAZ1AQ9NRL2 1556 aaPredicted RBP10.39□□□□□ -0.75
LINC00939-201ENST00000502479 UNC13AQ9UPW8 1703 aa10.38□□□□□ -0.75
LINC00939-201ENST00000502479 TRIM41Q8WV44 630 aa10.27□□□□□ -0.76
LINC00939-201ENST00000502479 TOP2AP11388 1531 aaKnown RBP10.27□□□□□ -0.77
LINC00939-201ENST00000502479 SMARCA4P51532 1647 aa10.24□□□□□ -0.77
LINC00939-201ENST00000502479 MROH2BQ7Z745 1585 aa10.21□□□□□ -0.77
LINC00939-201ENST00000502479 ZEB1P37275 1124 aaPredicted RBP10.21□□□□□ -0.77
LINC00939-201ENST00000502479 WIZO95785 1651 aa10.19□□□□□ -0.78
LINC00939-201ENST00000502479 TRIM26Q12899 539 aaPredicted RBP10.16□□□□□ -0.78
LINC00939-201ENST00000502479 HRCP23327 699 aa10.14□□□□□ -0.79
LINC00939-201ENST00000502479 BICRAQ9NZM4 1560 aa10.14□□□□□ -0.79
LINC00939-201ENST00000502479 EEA1Q15075 1411 aa10.14□□□□□ -0.79
LINC00939-201ENST00000502479 CECR2Q9BXF3 1484 aa10.14□□□□□ -0.79
LINC00939-201ENST00000502479 SMARCA2P51531 1590 aa10.11□□□□□ -0.79
LINC00939-201ENST00000502479 PEG3Q9GZU2 1588 aa10.1□□□□□ -0.79
LINC00939-201ENST00000502479 EIF4G1Q04637 1599 aaKnown RBP10.07□□□□□ -0.8
LINC00939-201ENST00000502479 PCGF6Q9BYE7 350 aa10.06□□□□□ -0.8
LINC00939-201ENST00000502479 CCDC88BA6NC98 1476 aa10.03□□□□□ -0.8
LINC00939-201ENST00000502479 BAZ1BQ9UIG0 1483 aaKnown RBP9.99□□□□□ -0.81
LINC00939-201ENST00000502479 LOC105371045A0A1W2PR82 267 aa9.97□□□□□ -0.81
LINC00939-201ENST00000502479 GOLGA3Q08378 1498 aa9.94□□□□□ -0.82
LINC00939-201ENST00000502479 HMGXB3Q12766 1538 aa9.93□□□□□ -0.82
LINC00939-201ENST00000502479 FAM9AQ8IZU1 332 aaPredicted RBP9.91□□□□□ -0.82
LINC00939-201ENST00000502479 TNIKQ9UKE5 1360 aa9.91□□□□□ -0.82
LINC00939-201ENST00000502479 ATAD2BQ9ULI0 1458 aa9.9□□□□□ -0.82
LINC00939-201ENST00000502479 WRNQ14191 1432 aaPredicted RBP eCLIP9.9□□□□□ -0.82
LINC00939-201ENST00000502479 KIF21BO75037 1637 aa9.9□□□□□ -0.82
LINC00939-201ENST00000502479 CEP164Q9UPV0 1460 aa9.9□□□□□ -0.82
LINC00939-201ENST00000502479 ABCC8Q09428 1581 aa9.86□□□□□ -0.83
LINC00939-201ENST00000502479 PRDM2Q13029 1718 aa9.85□□□□□ -0.83
LINC00939-201ENST00000502479 APLP2Q06481 763 aa9.84□□□□□ -0.83
LINC00939-201ENST00000502479 PABPN1Q86U42 306 aaKnown RBP eCLIP9.84□□□□□ -0.83
LINC00939-201ENST00000502479 CSRNP3Q8WYN3 585 aa9.83□□□□□ -0.84
LINC00939-201ENST00000502479 BIVM-ERCC5R4GMW8 1640 aa9.83□□□□□ -0.84
LINC00939-201ENST00000502479 CEP162Q5TB80 1403 aa9.82□□□□□ -0.84
LINC00939-201ENST00000502479 TOP2BQ02880 1626 aa9.81□□□□□ -0.84
LINC00939-201ENST00000502479 NCAPD3P42695 1498 aa9.81□□□□□ -0.84
LINC00939-201ENST00000502479 UBTFP17480 764 aaKnown RBP9.8□□□□□ -0.84
LINC00939-201ENST00000502479 ERICH3Q5RHP9 1530 aa9.78□□□□□ -0.84
LINC00939-201ENST00000502479 SYNJ1O43426 1573 aa9.74□□□□□ -0.85
LINC00939-201ENST00000502479 SOGA1O94964 1423 aa9.72□□□□□ -0.85
LINC00939-201ENST00000502479 CCER1Q8TC90 406 aaPredicted RBP9.71□□□□□ -0.86
LINC00939-201ENST00000502479 KIF27Q86VH2 1401 aa9.7□□□□□ -0.86
LINC00939-201ENST00000502479 CLIP1P30622 1438 aa9.7□□□□□ -0.86
LINC00939-201ENST00000502479 EHMT2Q96KQ7 1210 aa9.68□□□□□ -0.86
LINC00939-201ENST00000502479 CFTRP13569 1480 aa9.67□□□□□ -0.86
LINC00939-201ENST00000502479 VPS8Q8N3P4 1428 aa9.67□□□□□ -0.86
LINC00939-201ENST00000502479 CUX1P39880 1505 aa9.58□□□□□ -0.88
LINC00939-201ENST00000502479 CADPSQ9ULU8 1353 aa9.58□□□□□ -0.88
LINC00939-201ENST00000502479 PRXQ9BXM0 1461 aa9.57□□□□□ -0.88
LINC00939-201ENST00000502479 CUL7Q14999 1698 aa9.57□□□□□ -0.88
LINC00939-201ENST00000502479 CLSPNQ9HAW4 1339 aa9.57□□□□□ -0.88
LINC00939-201ENST00000502479 CC2D2AQ9P2K1 1620 aa9.57□□□□□ -0.88
LINC00939-201ENST00000502479 RUSC2Q8N2Y8 1516 aa9.57□□□□□ -0.88
LINC00939-201ENST00000502479 CENPBP07199 599 aaPredicted RBP9.57□□□□□ -0.88
LINC00939-201ENST00000502479 PPARGC1BQ86YN6 1023 aaKnown RBP9.56□□□□□ -0.88
LINC00939-201ENST00000502479 RAPGEF2Q9Y4G8 1499 aa9.56□□□□□ -0.88
LINC00939-201ENST00000502479 PELP1Q8IZL8 1130 aaKnown RBP9.55□□□□□ -0.88
LINC00939-201ENST00000502479 DNMBPQ6XZF7 1577 aa9.55□□□□□ -0.88
LINC00939-201ENST00000502479 MAP3K1Q13233 1512 aa9.55□□□□□ -0.88
LINC00939-201ENST00000502479 LAMC3Q9Y6N6 1575 aa9.54□□□□□ -0.88
LINC00939-201ENST00000502479 FHAD1B1AJZ9 1412 aa9.53□□□□□ -0.88
LINC00939-201ENST00000502479 EFCAB5A4FU69 1503 aa9.53□□□□□ -0.88
LINC00939-201ENST00000502479 CUX2O14529 1486 aa9.5□□□□□ -0.89
LINC00939-201ENST00000502479 FANCD2Q9BXW9 1451 aa9.49□□□□□ -0.89
LINC00939-201ENST00000502479 ACIN1Q9UKV3 1341 aaKnown RBP9.49□□□□□ -0.89
LINC00939-201ENST00000502479 KIF21AQ7Z4S6 1674 aa9.49□□□□□ -0.89
LINC00939-201ENST00000502479 ARAP1Q96P48 1450 aa9.48□□□□□ -0.89
LINC00939-201ENST00000502479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.47□□□□□ -0.89
LINC00939-201ENST00000502479 FGD5Q6ZNL6 1462 aa9.47□□□□□ -0.89
LINC00939-201ENST00000502479 PDS5BQ9NTI5 1447 aa9.47□□□□□ -0.89
LINC00939-201ENST00000502479 CTTNBP2Q8WZ74 1663 aa9.46□□□□□ -0.89
LINC00939-201ENST00000502479 ZNF316A6NFI3 1004 aaPredicted RBP9.45□□□□□ -0.9
LINC00939-201ENST00000502479 CARMIL1Q5VZK9 1371 aa9.45□□□□□ -0.9
LINC00939-201ENST00000502479 WDR97A6NE52 1622 aa9.45□□□□□ -0.9
LINC00939-201ENST00000502479 ABCA10Q8WWZ4 1543 aa9.45□□□□□ -0.9
LINC00939-201ENST00000502479 CFAP43Q8NDM7 1665 aa9.45□□□□□ -0.9
LINC00939-201ENST00000502479 AQRO60306 1485 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC00939-201ENST00000502479 RRBP1Q9P2E9 1410 aaKnown RBP9.44□□□□□ -0.9
LINC00939-201ENST00000502479 DIEXFQ68CQ4 756 aaKnown RBP9.43□□□□□ -0.9
LINC00939-201ENST00000502479 FYCO1Q9BQS8 1478 aa9.42□□□□□ -0.9
LINC00939-201ENST00000502479 THOC2Q8NI27 1593 aaKnown RBP9.42□□□□□ -0.9
LINC00939-201ENST00000502479 TIAM1Q13009 1591 aa9.42□□□□□ -0.9
LINC00939-201ENST00000502479 TTBK1Q5TCY1 1321 aaPredicted RBP9.42□□□□□ -0.9
LINC00939-201ENST00000502479 FMN1Q68DA7 1419 aa9.41□□□□□ -0.9
LINC00939-201ENST00000502479 TOPBP1Q92547 1522 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms