RNA–Protein interactions for RNA: ENST00000497947.6

LMO7-213, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-213ENST00000497947 AEBP2Q6ZN18 517 aaPredicted RBP22.17■■□□□ 1.14
LMO7-213ENST00000497947 CHIC1Q5VXU3 224 aa21.58■■□□□ 1.05
LMO7-213ENST00000497947 NISCHQ9Y2I1 1504 aa19.11■□□□□ 0.65
LMO7-213ENST00000497947 PHF23Q9BUL5 403 aaPredicted RBP19.01■□□□□ 0.63
LMO7-213ENST00000497947 SENP3Q9H4L4 574 aaPredicted RBP18.74■□□□□ 0.59
LMO7-213ENST00000497947 ABCC9O60706 1549 aa17.7■□□□□ 0.42
LMO7-213ENST00000497947 PLPPR3Q6T4P5 718 aa17.46■□□□□ 0.39
LMO7-213ENST00000497947 FOXD1Q16676 465 aa17.44■□□□□ 0.38
LMO7-213ENST00000497947 CCDC180Q9P1Z9 1646 aa17.26■□□□□ 0.35
LMO7-213ENST00000497947 DNAJC5BQ9UF47 199 aa17.02■□□□□ 0.32
LMO7-213ENST00000497947 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
LMO7-213ENST00000497947 ADRA2BP18089 450 aa16.71■□□□□ 0.27
LMO7-213ENST00000497947 RB1CC1Q8TDY2 1594 aa16.68■□□□□ 0.26
LMO7-213ENST00000497947 NACADO15069 1562 aa16.48■□□□□ 0.23
LMO7-213ENST00000497947 PABPN1Q86U42 306 aaKnown RBP eCLIP16.46■□□□□ 0.23
LMO7-213ENST00000497947 DCAF8L2P0C7V8 631 aa16.37■□□□□ 0.21
LMO7-213ENST00000497947 PIAS4Q8N2W9 510 aaPredicted RBP16.37■□□□□ 0.21
LMO7-213ENST00000497947 BICRAQ9NZM4 1560 aa16.17■□□□□ 0.18
LMO7-213ENST00000497947 MYO15BQ96JP2 1530 aa16.16■□□□□ 0.18
LMO7-213ENST00000497947 UNC13AQ9UPW8 1703 aa16.16■□□□□ 0.18
LMO7-213ENST00000497947 MSH5O43196 834 aa16.03■□□□□ 0.16
LMO7-213ENST00000497947 CECR2Q9BXF3 1484 aa16.02■□□□□ 0.15
LMO7-213ENST00000497947 SHROOM4Q9ULL8 1493 aa15.99■□□□□ 0.15
LMO7-213ENST00000497947 DNAJC5Q9H3Z4 198 aa15.97■□□□□ 0.15
LMO7-213ENST00000497947 CC2D2AQ9P2K1 1620 aa15.94■□□□□ 0.14
LMO7-213ENST00000497947 EIF4G1Q04637 1599 aaKnown RBP15.83■□□□□ 0.12
LMO7-213ENST00000497947 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
LMO7-213ENST00000497947 ZCCHC6Q5VYS8 1495 aaKnown RBP15.73■□□□□ 0.11
LMO7-213ENST00000497947 SCRIBQ14160 1630 aa15.68■□□□□ 0.1
LMO7-213ENST00000497947 CUX2O14529 1486 aa15.46■□□□□ 0.06
LMO7-213ENST00000497947 PPP4R3CPQ6ZMV5 832 aa15.4■□□□□ 0.06
LMO7-213ENST00000497947 ERCC6Q03468 1493 aa15.33■□□□□ 0.05
LMO7-213ENST00000497947 NCAPD3P42695 1498 aa15.27■□□□□ 0.03
LMO7-213ENST00000497947 SCAF1Q9H7N4 1312 aaKnown RBP15.22■□□□□ 0.03
LMO7-213ENST00000497947 MAPK8IP2Q13387 824 aaPredicted RBP15.18■□□□□ 0.02
LMO7-213ENST00000497947 ATAD2BQ9ULI0 1458 aa15.13■□□□□ 0.01
LMO7-213ENST00000497947 NESP48681 1621 aa15.07■□□□□ 0
LMO7-213ENST00000497947 TRIM41Q8WV44 630 aa15.05■□□□□ -0
LMO7-213ENST00000497947 HMGXB3Q12766 1538 aa15.05■□□□□ -0
LMO7-213ENST00000497947 SMARCA2P51531 1590 aa15.05■□□□□ -0
LMO7-213ENST00000497947 KCNA4P22459 653 aa15.02■□□□□ -0
LMO7-213ENST00000497947 DMRT2Q9Y5R5 561 aa14.99□□□□□ -0.01
LMO7-213ENST00000497947 CNKSR2Q8WXI2 1034 aa14.97□□□□□ -0.01
LMO7-213ENST00000497947 THOC2Q8NI27 1593 aaKnown RBP14.96□□□□□ -0.01
LMO7-213ENST00000497947 SUPT5HO00267 1087 aaKnown RBP14.95□□□□□ -0.02
LMO7-213ENST00000497947 SMARCA4P51532 1647 aa14.95□□□□□ -0.02
LMO7-213ENST00000497947 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
LMO7-213ENST00000497947 NCBP3Q53F19 620 aaKnown RBP14.93□□□□□ -0.02
LMO7-213ENST00000497947 LAMC3Q9Y6N6 1575 aa14.93□□□□□ -0.02
LMO7-213ENST00000497947 PDS5BQ9NTI5 1447 aa14.92□□□□□ -0.02
LMO7-213ENST00000497947 BAZ1AQ9NRL2 1556 aaPredicted RBP14.86□□□□□ -0.03
LMO7-213ENST00000497947 PEG3Q9GZU2 1588 aa14.84□□□□□ -0.03
LMO7-213ENST00000497947 CADPSQ9ULU8 1353 aa14.79□□□□□ -0.04
LMO7-213ENST00000497947 KIF21AQ7Z4S6 1674 aa14.78□□□□□ -0.04
LMO7-213ENST00000497947 NPM3O75607 178 aaKnown RBP14.78□□□□□ -0.04
LMO7-213ENST00000497947 OSCARQ8IYS5 282 aa14.76□□□□□ -0.05
LMO7-213ENST00000497947 MRC2Q9UBG0 1479 aa14.76□□□□□ -0.05
LMO7-213ENST00000497947 HRCP23327 699 aa14.75□□□□□ -0.05
LMO7-213ENST00000497947 WDR62O43379 1518 aa14.71□□□□□ -0.05
LMO7-213ENST00000497947 MROH2BQ7Z745 1585 aa14.7□□□□□ -0.06
LMO7-213ENST00000497947 POTEDQ86YR6 584 aa14.7□□□□□ -0.06
LMO7-213ENST00000497947 RNF216Q9NWF9 866 aaPredicted RBP14.7□□□□□ -0.06
LMO7-213ENST00000497947 HOXD11P31277 338 aaPredicted RBP14.69□□□□□ -0.06
LMO7-213ENST00000497947 CEP164Q9UPV0 1460 aa14.62□□□□□ -0.07
LMO7-213ENST00000497947 FANCD2Q9BXW9 1451 aa14.57□□□□□ -0.08
LMO7-213ENST00000497947 CFTRP13569 1480 aa14.51□□□□□ -0.09
LMO7-213ENST00000497947 RIMBP3CA6NJZ7 1639 aa14.46□□□□□ -0.09
LMO7-213ENST00000497947 RIMBP3BA6NNM3 1639 aa14.46□□□□□ -0.09
LMO7-213ENST00000497947 RIMBP3Q9UFD9 1639 aa14.46□□□□□ -0.09
LMO7-213ENST00000497947 URB2Q14146 1524 aaKnown RBP14.46□□□□□ -0.1
LMO7-213ENST00000497947 WIZO95785 1651 aa14.46□□□□□ -0.1
LMO7-213ENST00000497947 PCGF6Q9BYE7 350 aa14.43□□□□□ -0.1
LMO7-213ENST00000497947 ARHGEF11O15085 1522 aa14.42□□□□□ -0.1
LMO7-213ENST00000497947 CYB5RLQ6IPT4 315 aa14.41□□□□□ -0.1
LMO7-213ENST00000497947 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
LMO7-213ENST00000497947 IFT140Q96RY7 1462 aa14.37□□□□□ -0.11
LMO7-213ENST00000497947 ZNF608Q9ULD9 1512 aaPredicted RBP14.35□□□□□ -0.11
LMO7-213ENST00000497947 TRIM26Q12899 539 aaPredicted RBP14.33□□□□□ -0.12
LMO7-213ENST00000497947 ZEB1P37275 1124 aaPredicted RBP14.31□□□□□ -0.12
LMO7-213ENST00000497947 RSF1Q96T23 1441 aaPredicted RBP14.3□□□□□ -0.12
LMO7-213ENST00000497947 TOP2AP11388 1531 aaKnown RBP14.29□□□□□ -0.12
LMO7-213ENST00000497947 SLC4A1APQ9BWU0 796 aaKnown RBP14.26□□□□□ -0.13
LMO7-213ENST00000497947 ABCC8Q09428 1581 aa14.24□□□□□ -0.13
LMO7-213ENST00000497947 TOPBP1Q92547 1522 aa14.24□□□□□ -0.13
LMO7-213ENST00000497947 ARAP1Q96P48 1450 aa14.24□□□□□ -0.13
LMO7-213ENST00000497947 FBLN2P98095 1184 aa14.22□□□□□ -0.13
LMO7-213ENST00000497947 PRDM2Q13029 1718 aa14.21□□□□□ -0.14
LMO7-213ENST00000497947 DCAF8L1A6NGE4 600 aa14.2□□□□□ -0.14
LMO7-213ENST00000497947 AQRO60306 1485 aaKnown RBP eCLIP14.19□□□□□ -0.146e-8■□□□□ 9.3
LMO7-213ENST00000497947 EIF4G3O43432 1585 aaKnown RBP14.19□□□□□ -0.14
LMO7-213ENST00000497947 LOC105371045A0A1W2PR82 267 aa14.16□□□□□ -0.14
LMO7-213ENST00000497947 CCDC88BA6NC98 1476 aa14.16□□□□□ -0.14
LMO7-213ENST00000497947 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
LMO7-213ENST00000497947 CHD1O14646 1710 aa14.12□□□□□ -0.15
LMO7-213ENST00000497947 TARBP1Q13395 1621 aaKnown RBP14.11□□□□□ -0.15
LMO7-213ENST00000497947 PPARGC1BQ86YN6 1023 aaKnown RBP14.09□□□□□ -0.15
LMO7-213ENST00000497947 CHMP7Q8WUX9 453 aaPredicted RBP14.08□□□□□ -0.16
LMO7-213ENST00000497947 POLA1P09884 1462 aaPredicted RBP14.07□□□□□ -0.16
LMO7-213ENST00000497947 TDRD9Q8NDG6 1382 aaKnown RBP14.07□□□□□ -0.16
LMO7-213ENST00000497947 SOGA1O94964 1423 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms