RNA–Protein interactions for RNA: ENST00000497610.1

C3orf52-207, Transcript of chromosome 3 open reading frame 52, humanhuman

TSL 3

Gene C3orf52, Length 652 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf52-207ENST00000497610 AEBP2Q6ZN18 517 aaPredicted RBP23.73■■□□□ 1.39
C3orf52-207ENST00000497610 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
C3orf52-207ENST00000497610 SENP3Q9H4L4 574 aaPredicted RBP20.42■□□□□ 0.86
C3orf52-207ENST00000497610 POTEDQ86YR6 584 aa19.99■□□□□ 0.79
C3orf52-207ENST00000497610 PHF23Q9BUL5 403 aaPredicted RBP19.99■□□□□ 0.79
C3orf52-207ENST00000497610 FOXD1Q16676 465 aa19.18■□□□□ 0.66
C3orf52-207ENST00000497610 NISCHQ9Y2I1 1504 aa18.87■□□□□ 0.61
C3orf52-207ENST00000497610 MSH5O43196 834 aa18.4■□□□□ 0.54
C3orf52-207ENST00000497610 PIAS4Q8N2W9 510 aaPredicted RBP17.63■□□□□ 0.41
C3orf52-207ENST00000497610 PPP6R1Q9UPN7 881 aa17.04■□□□□ 0.32
C3orf52-207ENST00000497610 ADRA2BP18089 450 aa16.9■□□□□ 0.3
C3orf52-207ENST00000497610 PLPPR3Q6T4P5 718 aa16.53■□□□□ 0.24
C3orf52-207ENST00000497610 CACNB1Q02641 598 aaPredicted RBP16.52■□□□□ 0.24
C3orf52-207ENST00000497610 CCDC180Q9P1Z9 1646 aa16.47■□□□□ 0.23
C3orf52-207ENST00000497610 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
C3orf52-207ENST00000497610 ZCCHC6Q5VYS8 1495 aaKnown RBP15.91■□□□□ 0.14
C3orf52-207ENST00000497610 MAPK8IP2Q13387 824 aaPredicted RBP15.89■□□□□ 0.13
C3orf52-207ENST00000497610 DCAF1Q9Y4B6 1507 aa15.68■□□□□ 0.1
C3orf52-207ENST00000497610 RNF39Q9H2S5 420 aa15.6■□□□□ 0.09
C3orf52-207ENST00000497610 MYO15BQ96JP2 1530 aa15.46■□□□□ 0.07
C3orf52-207ENST00000497610 SCAF1Q9H7N4 1312 aaKnown RBP15.44■□□□□ 0.06
C3orf52-207ENST00000497610 POTEHQ6S545 545 aa15.42■□□□□ 0.06
C3orf52-207ENST00000497610 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
C3orf52-207ENST00000497610 SHROOM4Q9ULL8 1493 aa15.36■□□□□ 0.05
C3orf52-207ENST00000497610 DCAF8L2P0C7V8 631 aa15.33■□□□□ 0.04
C3orf52-207ENST00000497610 C1QBPQ07021 282 aaKnown RBP15.29■□□□□ 0.04
C3orf52-207ENST00000497610 NACADO15069 1562 aa15.25■□□□□ 0.03
C3orf52-207ENST00000497610 ABCC9O60706 1549 aa15.24■□□□□ 0.03
C3orf52-207ENST00000497610 RB1CC1Q8TDY2 1594 aa15.07■□□□□ 0
C3orf52-207ENST00000497610 SCRIBQ14160 1630 aa15.05■□□□□ -0
C3orf52-207ENST00000497610 HOXD11P31277 338 aaPredicted RBP14.95□□□□□ -0.02
C3orf52-207ENST00000497610 SUPT5HO00267 1087 aaKnown RBP14.86□□□□□ -0.03
C3orf52-207ENST00000497610 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
C3orf52-207ENST00000497610 RSF1Q96T23 1441 aaPredicted RBP14.67□□□□□ -0.06
C3orf52-207ENST00000497610 DNAJC5BQ9UF47 199 aa14.67□□□□□ -0.06
C3orf52-207ENST00000497610 BAZ1AQ9NRL2 1556 aaPredicted RBP14.6□□□□□ -0.07
C3orf52-207ENST00000497610 CECR2Q9BXF3 1484 aa14.57□□□□□ -0.08
C3orf52-207ENST00000497610 BICRAQ9NZM4 1560 aa14.57□□□□□ -0.08
C3orf52-207ENST00000497610 MROH2BQ7Z745 1585 aa14.55□□□□□ -0.08
C3orf52-207ENST00000497610 RNF216Q9NWF9 866 aaPredicted RBP14.51□□□□□ -0.09
C3orf52-207ENST00000497610 SMARCA4P51532 1647 aa14.49□□□□□ -0.09
C3orf52-207ENST00000497610 WIZO95785 1651 aa14.44□□□□□ -0.1
C3orf52-207ENST00000497610 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
C3orf52-207ENST00000497610 PEG3Q9GZU2 1588 aa14.34□□□□□ -0.11
C3orf52-207ENST00000497610 PPP4R3CPQ6ZMV5 832 aa14.34□□□□□ -0.11
C3orf52-207ENST00000497610 PABPN1Q86U42 306 aaKnown RBP eCLIP14.34□□□□□ -0.11
C3orf52-207ENST00000497610 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
C3orf52-207ENST00000497610 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.13
C3orf52-207ENST00000497610 SMARCA2P51531 1590 aa14.23□□□□□ -0.13
C3orf52-207ENST00000497610 DSG3P32926 999 aa14.2□□□□□ -0.14
C3orf52-207ENST00000497610 EIF4G1Q04637 1599 aaKnown RBP14.2□□□□□ -0.14
C3orf52-207ENST00000497610 ATAD2BQ9ULI0 1458 aa14.17□□□□□ -0.14
C3orf52-207ENST00000497610 CCDC88BA6NC98 1476 aa14.14□□□□□ -0.15
C3orf52-207ENST00000497610 BAZ1BQ9UIG0 1483 aaKnown RBP14.12□□□□□ -0.15
C3orf52-207ENST00000497610 HMGXB3Q12766 1538 aa14.1□□□□□ -0.15
C3orf52-207ENST00000497610 NCAPD3P42695 1498 aa14.04□□□□□ -0.16
C3orf52-207ENST00000497610 TRIM41Q8WV44 630 aa14.01□□□□□ -0.17
C3orf52-207ENST00000497610 CAPN15O75808 1086 aa14□□□□□ -0.17
C3orf52-207ENST00000497610 SPINK5Q9NQ38 1064 aaPredicted RBP13.98□□□□□ -0.17
C3orf52-207ENST00000497610 SP7Q8TDD2 431 aaPredicted RBP13.89□□□□□ -0.19
C3orf52-207ENST00000497610 ABCC8Q09428 1581 aa13.88□□□□□ -0.19
C3orf52-207ENST00000497610 CC2D2AQ9P2K1 1620 aa13.85□□□□□ -0.19
C3orf52-207ENST00000497610 WRNQ14191 1432 aaPredicted RBP eCLIP13.82□□□□□ -0.2
C3orf52-207ENST00000497610 U3KPZ7 1027 aaPredicted RBP13.82□□□□□ -0.2
C3orf52-207ENST00000497610 PRDM2Q13029 1718 aa13.8□□□□□ -0.2
C3orf52-207ENST00000497610 EEA1Q15075 1411 aa13.8□□□□□ -0.2
C3orf52-207ENST00000497610 CFTRP13569 1480 aa13.77□□□□□ -0.21
C3orf52-207ENST00000497610 CHRDL2Q6WN34 429 aa13.76□□□□□ -0.21
C3orf52-207ENST00000497610 SYNJ1O43426 1573 aa13.75□□□□□ -0.21
C3orf52-207ENST00000497610 LOC105371045A0A1W2PR82 267 aa13.74□□□□□ -0.21
C3orf52-207ENST00000497610 TOP2BQ02880 1626 aa13.73□□□□□ -0.21
C3orf52-207ENST00000497610 BIVM-ERCC5R4GMW8 1640 aa13.73□□□□□ -0.21
C3orf52-207ENST00000497610 FAM9AQ8IZU1 332 aaPredicted RBP13.68□□□□□ -0.22
C3orf52-207ENST00000497610 CADPSQ9ULU8 1353 aa13.67□□□□□ -0.22
C3orf52-207ENST00000497610 SOGA1O94964 1423 aa13.64□□□□□ -0.23
C3orf52-207ENST00000497610 CUX1P39880 1505 aa13.6□□□□□ -0.23
C3orf52-207ENST00000497610 KIF21BO75037 1637 aa13.6□□□□□ -0.23
C3orf52-207ENST00000497610 ABCB7O75027 752 aa13.58□□□□□ -0.24
C3orf52-207ENST00000497610 GOLGA3Q08378 1498 aa13.57□□□□□ -0.24
C3orf52-207ENST00000497610 CSRNP3Q8WYN3 585 aa13.57□□□□□ -0.24
C3orf52-207ENST00000497610 RBM42Q9BTD8 480 aaKnown RBP13.57□□□□□ -0.24
C3orf52-207ENST00000497610 LAMC3Q9Y6N6 1575 aa13.57□□□□□ -0.24
C3orf52-207ENST00000497610 CEP164Q9UPV0 1460 aa13.56□□□□□ -0.24
C3orf52-207ENST00000497610 RUSC2Q8N2Y8 1516 aa13.56□□□□□ -0.24
C3orf52-207ENST00000497610 TNIKQ9UKE5 1360 aa13.54□□□□□ -0.24
C3orf52-207ENST00000497610 FANCD2Q9BXW9 1451 aa13.52□□□□□ -0.25
C3orf52-207ENST00000497610 TRHP20396 242 aaPredicted RBP13.49□□□□□ -0.25
C3orf52-207ENST00000497610 DNMBPQ6XZF7 1577 aa13.48□□□□□ -0.25
C3orf52-207ENST00000497610 ERICH3Q5RHP9 1530 aa13.48□□□□□ -0.25
C3orf52-207ENST00000497610 KIF27Q86VH2 1401 aa13.47□□□□□ -0.25
C3orf52-207ENST00000497610 CEP162Q5TB80 1403 aa13.46□□□□□ -0.26
C3orf52-207ENST00000497610 FGD5Q6ZNL6 1462 aa13.43□□□□□ -0.26
C3orf52-207ENST00000497610 NESP48681 1621 aa13.43□□□□□ -0.26
C3orf52-207ENST00000497610 PDS5BQ9NTI5 1447 aa13.43□□□□□ -0.26
C3orf52-207ENST00000497610 PRXQ9BXM0 1461 aa13.42□□□□□ -0.26
C3orf52-207ENST00000497610 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
C3orf52-207ENST00000497610 EHMT2Q96KQ7 1210 aa13.41□□□□□ -0.26
C3orf52-207ENST00000497610 ZNF219Q9P2Y4 722 aaPredicted RBP13.41□□□□□ -0.26
C3orf52-207ENST00000497610 TOPBP1Q92547 1522 aa13.4□□□□□ -0.26
C3orf52-207ENST00000497610 RAPGEF2Q9Y4G8 1499 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms