RNA–Protein interactions for RNA: ENST00000496616.5

PPEF1-209, Transcript of protein phosphatase with EF-hand domain 1, humanhuman

TSL 3

Gene PPEF1, Length 906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPEF1-209ENST00000496616 NISCHQ9Y2I1 1504 aa16.6■□□□□ 0.25
PPEF1-209ENST00000496616 AEBP2Q6ZN18 517 aaPredicted RBP14.96□□□□□ -0.01
PPEF1-209ENST00000496616 CCDC180Q9P1Z9 1646 aa14.81□□□□□ -0.04
PPEF1-209ENST00000496616 MYT1Q01538 1121 aa14.73□□□□□ -0.05
PPEF1-209ENST00000496616 PELP1Q8IZL8 1130 aaKnown RBP14.54□□□□□ -0.08
PPEF1-209ENST00000496616 TTBK1Q5TCY1 1321 aaPredicted RBP14.47□□□□□ -0.09
PPEF1-209ENST00000496616 ABCC9O60706 1549 aa14.46□□□□□ -0.1
PPEF1-209ENST00000496616 SLC24A1O60721 1099 aa14.33□□□□□ -0.12
PPEF1-209ENST00000496616 CHIC1Q5VXU3 224 aa14.15□□□□□ -0.14
PPEF1-209ENST00000496616 RB1CC1Q8TDY2 1594 aa13.89□□□□□ -0.19
PPEF1-209ENST00000496616 NACADO15069 1562 aa13.88□□□□□ -0.19
PPEF1-209ENST00000496616 ZCCHC6Q5VYS8 1495 aaKnown RBP13.83□□□□□ -0.2
PPEF1-209ENST00000496616 MYO15BQ96JP2 1530 aa13.8□□□□□ -0.2
PPEF1-209ENST00000496616 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
PPEF1-209ENST00000496616 DCAF8L2P0C7V8 631 aa13.74□□□□□ -0.21
PPEF1-209ENST00000496616 DCAF1Q9Y4B6 1507 aa13.74□□□□□ -0.21
PPEF1-209ENST00000496616 ERICH6Q7L0X2 663 aa13.7□□□□□ -0.22
PPEF1-209ENST00000496616 BICRAQ9NZM4 1560 aa13.58□□□□□ -0.23
PPEF1-209ENST00000496616 DAXXQ9UER7 740 aaPredicted RBP13.57□□□□□ -0.24
PPEF1-209ENST00000496616 APLP2Q06481 763 aa13.5□□□□□ -0.25
PPEF1-209ENST00000496616 PABPN1Q86U42 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
PPEF1-209ENST00000496616 SCRIBQ14160 1630 aa13.47□□□□□ -0.25
PPEF1-209ENST00000496616 DNAJC5BQ9UF47 199 aa13.38□□□□□ -0.27
PPEF1-209ENST00000496616 SHROOM4Q9ULL8 1493 aa13.31□□□□□ -0.28
PPEF1-209ENST00000496616 PRKCSHP14314 528 aaPredicted RBP13.28□□□□□ -0.28
PPEF1-209ENST00000496616 EIF4G1Q04637 1599 aaKnown RBP13.15□□□□□ -0.3
PPEF1-209ENST00000496616 CC2D2AQ9P2K1 1620 aa13.13□□□□□ -0.31
PPEF1-209ENST00000496616 SENP3Q9H4L4 574 aaPredicted RBP13□□□□□ -0.33
PPEF1-209ENST00000496616 CECR2Q9BXF3 1484 aa12.98□□□□□ -0.33
PPEF1-209ENST00000496616 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
PPEF1-209ENST00000496616 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
PPEF1-209ENST00000496616 BAZ1AQ9NRL2 1556 aaPredicted RBP12.83□□□□□ -0.36
PPEF1-209ENST00000496616 NCAPD3P42695 1498 aa12.82□□□□□ -0.36
PPEF1-209ENST00000496616 ATAD2BQ9ULI0 1458 aa12.82□□□□□ -0.36
PPEF1-209ENST00000496616 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
PPEF1-209ENST00000496616 PEG3Q9GZU2 1588 aa12.8□□□□□ -0.36
PPEF1-209ENST00000496616 SMARCA2P51531 1590 aa12.77□□□□□ -0.37
PPEF1-209ENST00000496616 HMGXB3Q12766 1538 aa12.76□□□□□ -0.37
PPEF1-209ENST00000496616 WIZO95785 1651 aa12.7□□□□□ -0.38
PPEF1-209ENST00000496616 ARXQ96QS3 562 aa12.67□□□□□ -0.38
PPEF1-209ENST00000496616 PHF23Q9BUL5 403 aaPredicted RBP12.67□□□□□ -0.38
PPEF1-209ENST00000496616 BAZ1BQ9UIG0 1483 aaKnown RBP12.66□□□□□ -0.38
PPEF1-209ENST00000496616 RSF1Q96T23 1441 aaPredicted RBP12.63□□□□□ -0.39
PPEF1-209ENST00000496616 EIF5BO60841 1220 aaKnown RBP12.62□□□□□ -0.39
PPEF1-209ENST00000496616 RANGAP1P46060 587 aaPredicted RBP12.58□□□□□ -0.4
PPEF1-209ENST00000496616 NESP48681 1621 aa12.55□□□□□ -0.4
PPEF1-209ENST00000496616 BCL11AQ9H165 835 aa12.54□□□□□ -0.4
PPEF1-209ENST00000496616 TOP2AP11388 1531 aaKnown RBP12.51□□□□□ -0.41
PPEF1-209ENST00000496616 DNAJC5Q9H3Z4 198 aa12.5□□□□□ -0.41
PPEF1-209ENST00000496616 LAMC3Q9Y6N6 1575 aa12.47□□□□□ -0.41
PPEF1-209ENST00000496616 KIF21AQ7Z4S6 1674 aa12.45□□□□□ -0.42
PPEF1-209ENST00000496616 CADPSQ9ULU8 1353 aa12.41□□□□□ -0.42
PPEF1-209ENST00000496616 THOC2Q8NI27 1593 aaKnown RBP12.39□□□□□ -0.43
PPEF1-209ENST00000496616 ERCC6Q03468 1493 aa12.39□□□□□ -0.43
PPEF1-209ENST00000496616 CCDC88BA6NC98 1476 aa12.37□□□□□ -0.43
PPEF1-209ENST00000496616 CFTRP13569 1480 aa12.36□□□□□ -0.43
PPEF1-209ENST00000496616 PRDM2Q13029 1718 aa12.36□□□□□ -0.43
PPEF1-209ENST00000496616 CUX2O14529 1486 aa12.33□□□□□ -0.44
PPEF1-209ENST00000496616 PDS5BQ9NTI5 1447 aa12.32□□□□□ -0.44
PPEF1-209ENST00000496616 POTEDQ86YR6 584 aa12.31□□□□□ -0.44
PPEF1-209ENST00000496616 AMER1Q5JTC6 1135 aaPredicted RBP12.3□□□□□ -0.44
PPEF1-209ENST00000496616 FANCD2Q9BXW9 1451 aa12.27□□□□□ -0.45
PPEF1-209ENST00000496616 RTN4Q9NQC3 1192 aaKnown RBP12.25□□□□□ -0.45
PPEF1-209ENST00000496616 WDR62O43379 1518 aa12.24□□□□□ -0.45
PPEF1-209ENST00000496616 MRC2Q9UBG0 1479 aa12.24□□□□□ -0.45
PPEF1-209ENST00000496616 CEP164Q9UPV0 1460 aa12.23□□□□□ -0.45
PPEF1-209ENST00000496616 EHMT2Q96KQ7 1210 aa12.21□□□□□ -0.45
PPEF1-209ENST00000496616 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.46
PPEF1-209ENST00000496616 SUPT5HO00267 1087 aaKnown RBP12.19□□□□□ -0.46
PPEF1-209ENST00000496616 CENPBP07199 599 aaPredicted RBP12.17□□□□□ -0.46
PPEF1-209ENST00000496616 HOMEZQ8IX15 550 aa12.17□□□□□ -0.46
PPEF1-209ENST00000496616 FAM9AQ8IZU1 332 aaPredicted RBP12.16□□□□□ -0.46
PPEF1-209ENST00000496616 FOXD1Q16676 465 aa12.1□□□□□ -0.47
PPEF1-209ENST00000496616 TOPBP1Q92547 1522 aa12.1□□□□□ -0.47
PPEF1-209ENST00000496616 DNMBPQ6XZF7 1577 aa12.08□□□□□ -0.48
PPEF1-209ENST00000496616 HRCP23327 699 aa12.05□□□□□ -0.48
PPEF1-209ENST00000496616 UBE2Q2Q8WVN8 375 aa12.05□□□□□ -0.48
PPEF1-209ENST00000496616 PLPPR3Q6T4P5 718 aa12.04□□□□□ -0.48
PPEF1-209ENST00000496616 ABCC8Q09428 1581 aa12.03□□□□□ -0.48
PPEF1-209ENST00000496616 TARBP1Q13395 1621 aaKnown RBP12.03□□□□□ -0.48
PPEF1-209ENST00000496616 CUX1P39880 1505 aa12.02□□□□□ -0.48
PPEF1-209ENST00000496616 POLA1P09884 1462 aaPredicted RBP12□□□□□ -0.49
PPEF1-209ENST00000496616 ZNF608Q9ULD9 1512 aaPredicted RBP12□□□□□ -0.49
PPEF1-209ENST00000496616 IFT140Q96RY7 1462 aa11.98□□□□□ -0.49
PPEF1-209ENST00000496616 TIMELESSQ9UNS1 1208 aa11.97□□□□□ -0.49
PPEF1-209ENST00000496616 WDR97A6NE52 1622 aa11.95□□□□□ -0.5
PPEF1-209ENST00000496616 EIF4G3O43432 1585 aaKnown RBP11.95□□□□□ -0.5
PPEF1-209ENST00000496616 FGD5Q6ZNL6 1462 aa11.95□□□□□ -0.5
PPEF1-209ENST00000496616 RAD54L2Q9Y4B4 1467 aa11.95□□□□□ -0.5
PPEF1-209ENST00000496616 BIVM-ERCC5R4GMW8 1640 aa11.93□□□□□ -0.5
PPEF1-209ENST00000496616 PODXL2Q9NZ53 605 aa11.92□□□□□ -0.5
PPEF1-209ENST00000496616 SYNJ1O43426 1573 aa11.92□□□□□ -0.5
PPEF1-209ENST00000496616 SOGA1O94964 1423 aa11.9□□□□□ -0.5
PPEF1-209ENST00000496616 TOP2BQ02880 1626 aa11.89□□□□□ -0.51
PPEF1-209ENST00000496616 AQRO60306 1485 aaKnown RBP eCLIP11.89□□□□□ -0.51
PPEF1-209ENST00000496616 SCAF1Q9H7N4 1312 aaKnown RBP11.89□□□□□ -0.51
PPEF1-209ENST00000496616 WRNQ14191 1432 aaPredicted RBP eCLIP11.86□□□□□ -0.51
PPEF1-209ENST00000496616 TDRD9Q8NDG6 1382 aaKnown RBP11.85□□□□□ -0.51
PPEF1-209ENST00000496616 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
PPEF1-209ENST00000496616 CHD1O14646 1710 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms