RNA–Protein interactions for RNA: ENST00000495399.1

C9orf135-204, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 2

Gene C9orf135, Length 502 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-204ENST00000495399 AEBP2Q6ZN18 517 aaPredicted RBP24.01■■□□□ 1.43
C9orf135-204ENST00000495399 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
C9orf135-204ENST00000495399 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
C9orf135-204ENST00000495399 PHF23Q9BUL5 403 aaPredicted RBP20.28■□□□□ 0.84
C9orf135-204ENST00000495399 NISCHQ9Y2I1 1504 aa19.61■□□□□ 0.73
C9orf135-204ENST00000495399 FOXD1Q16676 465 aa19.29■□□□□ 0.68
C9orf135-204ENST00000495399 POTEDQ86YR6 584 aa18.94■□□□□ 0.62
C9orf135-204ENST00000495399 ABCC9O60706 1549 aa18.69■□□□□ 0.58
C9orf135-204ENST00000495399 DNAJC5BQ9UF47 199 aa18.4■□□□□ 0.54
C9orf135-204ENST00000495399 MSH5O43196 834 aa18.36■□□□□ 0.53
C9orf135-204ENST00000495399 PIAS4Q8N2W9 510 aaPredicted RBP17.94■□□□□ 0.46
C9orf135-204ENST00000495399 CCDC180Q9P1Z9 1646 aa17.93■□□□□ 0.46
C9orf135-204ENST00000495399 PLPPR3Q6T4P5 718 aa17.53■□□□□ 0.4
C9orf135-204ENST00000495399 PPP6R1Q9UPN7 881 aa17.52■□□□□ 0.4
C9orf135-204ENST00000495399 ADRA2BP18089 450 aa17.48■□□□□ 0.39
C9orf135-204ENST00000495399 RB1CC1Q8TDY2 1594 aa17.41■□□□□ 0.38
C9orf135-204ENST00000495399 DNAJC5Q9H3Z4 198 aa17.4■□□□□ 0.38
C9orf135-204ENST00000495399 PABPN1Q86U42 306 aaKnown RBP eCLIP17.27■□□□□ 0.36
C9orf135-204ENST00000495399 UNC13AQ9UPW8 1703 aa17.13■□□□□ 0.33
C9orf135-204ENST00000495399 NACADO15069 1562 aa17.12■□□□□ 0.33
C9orf135-204ENST00000495399 BICRAQ9NZM4 1560 aa17.08■□□□□ 0.32
C9orf135-204ENST00000495399 CECR2Q9BXF3 1484 aa16.92■□□□□ 0.3
C9orf135-204ENST00000495399 CC2D2AQ9P2K1 1620 aa16.88■□□□□ 0.29
C9orf135-204ENST00000495399 DCAF8L2P0C7V8 631 aa16.72■□□□□ 0.27
C9orf135-204ENST00000495399 MYO15BQ96JP2 1530 aa16.67■□□□□ 0.26
C9orf135-204ENST00000495399 EIF4G1Q04637 1599 aaKnown RBP16.64■□□□□ 0.25
C9orf135-204ENST00000495399 SHROOM4Q9ULL8 1493 aa16.64■□□□□ 0.25
C9orf135-204ENST00000495399 CUX2O14529 1486 aa16.43■□□□□ 0.22
C9orf135-204ENST00000495399 DMRT2Q9Y5R5 561 aa16.25■□□□□ 0.19
C9orf135-204ENST00000495399 SCRIBQ14160 1630 aa16.24■□□□□ 0.19
C9orf135-204ENST00000495399 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
C9orf135-204ENST00000495399 CACNB1Q02641 598 aaPredicted RBP16.17■□□□□ 0.18
C9orf135-204ENST00000495399 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
C9orf135-204ENST00000495399 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
C9orf135-204ENST00000495399 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
C9orf135-204ENST00000495399 SCAF1Q9H7N4 1312 aaKnown RBP16.08■□□□□ 0.16
C9orf135-204ENST00000495399 ZCCHC6Q5VYS8 1495 aaKnown RBP16.08■□□□□ 0.16
C9orf135-204ENST00000495399 THOC2Q8NI27 1593 aaKnown RBP15.89■□□□□ 0.13
C9orf135-204ENST00000495399 NESP48681 1621 aa15.88■□□□□ 0.13
C9orf135-204ENST00000495399 NCAPD3P42695 1498 aa15.87■□□□□ 0.13
C9orf135-204ENST00000495399 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
C9orf135-204ENST00000495399 ATAD2BQ9ULI0 1458 aa15.7■□□□□ 0.1
C9orf135-204ENST00000495399 HMGXB3Q12766 1538 aa15.63■□□□□ 0.09
C9orf135-204ENST00000495399 KIF21AQ7Z4S6 1674 aa15.63■□□□□ 0.09
C9orf135-204ENST00000495399 SMARCA2P51531 1590 aa15.62■□□□□ 0.09
C9orf135-204ENST00000495399 LAMC3Q9Y6N6 1575 aa15.58■□□□□ 0.09
C9orf135-204ENST00000495399 BAZ1AQ9NRL2 1556 aaPredicted RBP15.57■□□□□ 0.08
C9orf135-204ENST00000495399 RNF39Q9H2S5 420 aa15.55■□□□□ 0.08
C9orf135-204ENST00000495399 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
C9orf135-204ENST00000495399 RIMBP3CA6NJZ7 1639 aa15.47■□□□□ 0.07
C9orf135-204ENST00000495399 RIMBP3BA6NNM3 1639 aa15.47■□□□□ 0.07
C9orf135-204ENST00000495399 RIMBP3Q9UFD9 1639 aa15.47■□□□□ 0.07
C9orf135-204ENST00000495399 PDS5BQ9NTI5 1447 aa15.47■□□□□ 0.07
C9orf135-204ENST00000495399 WDR62O43379 1518 aa15.46■□□□□ 0.07
C9orf135-204ENST00000495399 SMARCA4P51532 1647 aa15.46■□□□□ 0.06
C9orf135-204ENST00000495399 MRC2Q9UBG0 1479 aa15.42■□□□□ 0.06
C9orf135-204ENST00000495399 BAZ1BQ9UIG0 1483 aaKnown RBP15.41■□□□□ 0.06
C9orf135-204ENST00000495399 HOXD11P31277 338 aaPredicted RBP15.39■□□□□ 0.05
C9orf135-204ENST00000495399 PEG3Q9GZU2 1588 aa15.36■□□□□ 0.05
C9orf135-204ENST00000495399 C1QBPQ07021 282 aaKnown RBP15.33■□□□□ 0.04
C9orf135-204ENST00000495399 ARHGEF11O15085 1522 aa15.33■□□□□ 0.04
C9orf135-204ENST00000495399 CADPSQ9ULU8 1353 aa15.3■□□□□ 0.04
C9orf135-204ENST00000495399 PPP4R3CPQ6ZMV5 832 aa15.26■□□□□ 0.03
C9orf135-204ENST00000495399 TRHP20396 242 aaPredicted RBP15.21■□□□□ 0.03
C9orf135-204ENST00000495399 CYB5RLQ6IPT4 315 aa15.2■□□□□ 0.02
C9orf135-204ENST00000495399 CEP164Q9UPV0 1460 aa15.17■□□□□ 0.02
C9orf135-204ENST00000495399 ARAP1Q96P48 1450 aa15.14■□□□□ 0.01
C9orf135-204ENST00000495399 RNF216Q9NWF9 866 aaPredicted RBP15.14■□□□□ 0.01
C9orf135-204ENST00000495399 CNKSR2Q8WXI2 1034 aa15.13■□□□□ 0.01
C9orf135-204ENST00000495399 MROH2BQ7Z745 1585 aa15.12■□□□□ 0.01
C9orf135-204ENST00000495399 FANCD2Q9BXW9 1451 aa15.11■□□□□ 0.01
C9orf135-204ENST00000495399 URB2Q14146 1524 aaKnown RBP15.1■□□□□ 0.01
C9orf135-204ENST00000495399 ZNF608Q9ULD9 1512 aaPredicted RBP15.05■□□□□ -0
C9orf135-204ENST00000495399 CFTRP13569 1480 aa14.99□□□□□ -0.01
C9orf135-204ENST00000495399 ILDR1Q86SU0 546 aaPredicted RBP14.97□□□□□ -0.01
C9orf135-204ENST00000495399 RSF1Q96T23 1441 aaPredicted RBP14.94□□□□□ -0.02
C9orf135-204ENST00000495399 CHD1O14646 1710 aa14.93□□□□□ -0.02
C9orf135-204ENST00000495399 IFT140Q96RY7 1462 aa14.92□□□□□ -0.02
C9orf135-204ENST00000495399 WIZO95785 1651 aa14.88□□□□□ -0.03
C9orf135-204ENST00000495399 EIF4G3O43432 1585 aaKnown RBP14.88□□□□□ -0.03
C9orf135-204ENST00000495399 CLASP1Q7Z460 1538 aa14.79□□□□□ -0.04
C9orf135-204ENST00000495399 AQRO60306 1485 aaKnown RBP eCLIP14.77□□□□□ -0.04
C9orf135-204ENST00000495399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.77□□□□□ -0.05
C9orf135-204ENST00000495399 TOPBP1Q92547 1522 aa14.76□□□□□ -0.05
C9orf135-204ENST00000495399 POTEHQ6S545 545 aa14.75□□□□□ -0.05
C9orf135-204ENST00000495399 PRDM2Q13029 1718 aa14.75□□□□□ -0.05
C9orf135-204ENST00000495399 TARBP1Q13395 1621 aaKnown RBP14.74□□□□□ -0.05
C9orf135-204ENST00000495399 FBLN2P98095 1184 aa14.7□□□□□ -0.06
C9orf135-204ENST00000495399 KDM4FA0A1W2PPD8 638 aa14.64□□□□□ -0.07
C9orf135-204ENST00000495399 GAPVD1Q14C86 1478 aa14.63□□□□□ -0.07
C9orf135-204ENST00000495399 DNMBPQ6XZF7 1577 aa14.62□□□□□ -0.07
C9orf135-204ENST00000495399 ABCC8Q09428 1581 aa14.61□□□□□ -0.07
C9orf135-204ENST00000495399 TOP2AP11388 1531 aaKnown RBP14.6□□□□□ -0.07
C9orf135-204ENST00000495399 SYNJ1O43426 1573 aa14.59□□□□□ -0.07
C9orf135-204ENST00000495399 KIF13AQ9H1H9 1805 aa14.59□□□□□ -0.07
C9orf135-204ENST00000495399 POLA1P09884 1462 aaPredicted RBP14.57□□□□□ -0.08
C9orf135-204ENST00000495399 SNAPC4Q5SXM2 1469 aa14.57□□□□□ -0.08
C9orf135-204ENST00000495399 NCBP3Q53F19 620 aaKnown RBP14.55□□□□□ -0.08
C9orf135-204ENST00000495399 TDRD9Q8NDG6 1382 aaKnown RBP14.54□□□□□ -0.08
C9orf135-204ENST00000495399 RAD54L2Q9Y4B4 1467 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms