RNA–Protein interactions for RNA: ENST00000494919.1

TMEM17-203, Transcript of transmembrane protein 17, humanhuman

TSL 2

Gene TMEM17, Length 2,460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM17-203ENST00000494919 NISCHQ9Y2I1 1504 aa35.71■■■■□ 3.31
TMEM17-203ENST00000494919 CCDC180Q9P1Z9 1646 aa30.8■■■□□ 2.52
TMEM17-203ENST00000494919 ZCCHC6Q5VYS8 1495 aaKnown RBP30.1■■■□□ 2.41
TMEM17-203ENST00000494919 SHROOM4Q9ULL8 1493 aa29.7■■■□□ 2.34
TMEM17-203ENST00000494919 DCAF1Q9Y4B6 1507 aa29.49■■■□□ 2.31
TMEM17-203ENST00000494919 DCAF8L2P0C7V8 631 aa29.42■■■□□ 2.3
TMEM17-203ENST00000494919 SUPT5HO00267 1087 aaKnown RBP29.27■■■□□ 2.28
TMEM17-203ENST00000494919 MYO15BQ96JP2 1530 aa28.93■■■□□ 2.22
TMEM17-203ENST00000494919 ABCC9O60706 1549 aa28.78■■■□□ 2.2
TMEM17-203ENST00000494919 NACADO15069 1562 aa28.6■■■□□ 2.17
TMEM17-203ENST00000494919 CHIC1Q5VXU3 224 aa28.58■■■□□ 2.17
TMEM17-203ENST00000494919 SCRIBQ14160 1630 aa28.49■■■□□ 2.15
TMEM17-203ENST00000494919 HRCP23327 699 aa28.33■■■□□ 2.13
TMEM17-203ENST00000494919 RB1CC1Q8TDY2 1594 aa28.23■■■□□ 2.11
TMEM17-203ENST00000494919 PCGF6Q9BYE7 350 aa28.13■■■□□ 2.09
TMEM17-203ENST00000494919 RSF1Q96T23 1441 aaPredicted RBP27.95■■■□□ 2.06
TMEM17-203ENST00000494919 LOC105371045A0A1W2PR82 267 aa27.81■■■□□ 2.04
TMEM17-203ENST00000494919 PPARGC1BQ86YN6 1023 aaKnown RBP27.78■■■□□ 2.04
TMEM17-203ENST00000494919 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.04
TMEM17-203ENST00000494919 UNC13AQ9UPW8 1703 aa27.69■■■□□ 2.02
TMEM17-203ENST00000494919 MROH2BQ7Z745 1585 aa27.64■■■□□ 2.02
TMEM17-203ENST00000494919 BAZ1AQ9NRL2 1556 aaPredicted RBP27.51■■□□□ 1.99
TMEM17-203ENST00000494919 TRIM26Q12899 539 aaPredicted RBP27.43■■□□□ 1.98
TMEM17-203ENST00000494919 BICRAQ9NZM4 1560 aa27.43■■□□□ 1.98
TMEM17-203ENST00000494919 WIZO95785 1651 aa27.43■■□□□ 1.98
TMEM17-203ENST00000494919 SMARCA4P51532 1647 aa27.32■■□□□ 1.96
TMEM17-203ENST00000494919 PABPN1Q86U42 306 aaKnown RBP eCLIP27.31■■□□□ 1.96
TMEM17-203ENST00000494919 TRIM41Q8WV44 630 aa27.18■■□□□ 1.94
TMEM17-203ENST00000494919 TOP2AP11388 1531 aaKnown RBP27.12■■□□□ 1.93
TMEM17-203ENST00000494919 FAM9AQ8IZU1 332 aaPredicted RBP27.06■■□□□ 1.92
TMEM17-203ENST00000494919 PEG3Q9GZU2 1588 aa26.96■■□□□ 1.91
TMEM17-203ENST00000494919 ZEB1P37275 1124 aaPredicted RBP26.94■■□□□ 1.9
TMEM17-203ENST00000494919 CCDC88BA6NC98 1476 aa26.91■■□□□ 1.9
TMEM17-203ENST00000494919 SMARCA2P51531 1590 aa26.9■■□□□ 1.9
TMEM17-203ENST00000494919 EHMT2Q96KQ7 1210 aa26.89■■□□□ 1.9
TMEM17-203ENST00000494919 EIF4G1Q04637 1599 aaKnown RBP26.89■■□□□ 1.9
TMEM17-203ENST00000494919 ATAD2BQ9ULI0 1458 aa26.78■■□□□ 1.88
TMEM17-203ENST00000494919 PELP1Q8IZL8 1130 aaKnown RBP26.74■■□□□ 1.87
TMEM17-203ENST00000494919 BAZ1BQ9UIG0 1483 aaKnown RBP26.63■■□□□ 1.85
TMEM17-203ENST00000494919 ABCC8Q09428 1581 aa26.51■■□□□ 1.84
TMEM17-203ENST00000494919 NCAPD3P42695 1498 aa26.45■■□□□ 1.82
TMEM17-203ENST00000494919 HMGXB3Q12766 1538 aa26.41■■□□□ 1.82
TMEM17-203ENST00000494919 SCAF1Q9H7N4 1312 aaKnown RBP26.38■■□□□ 1.81
TMEM17-203ENST00000494919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.34■■□□□ 1.81
TMEM17-203ENST00000494919 WRNQ14191 1432 aaPredicted RBP eCLIP26.27■■□□□ 1.8
TMEM17-203ENST00000494919 CCER1Q8TC90 406 aaPredicted RBP26.26■■□□□ 1.79
TMEM17-203ENST00000494919 SOGA1O94964 1423 aa26.16■■□□□ 1.78
TMEM17-203ENST00000494919 SYNJ1O43426 1573 aa26.13■■□□□ 1.77
TMEM17-203ENST00000494919 EEA1Q15075 1411 aa26.13■■□□□ 1.77
TMEM17-203ENST00000494919 TTBK1Q5TCY1 1321 aaPredicted RBP26.12■■□□□ 1.77
TMEM17-203ENST00000494919 CEP162Q5TB80 1403 aa26.07■■□□□ 1.76
TMEM17-203ENST00000494919 RUSC2Q8N2Y8 1516 aa26.04■■□□□ 1.76
TMEM17-203ENST00000494919 CC2D2AQ9P2K1 1620 aa26.02■■□□□ 1.76
TMEM17-203ENST00000494919 CFTRP13569 1480 aa26.01■■□□□ 1.76
TMEM17-203ENST00000494919 CSRNP3Q8WYN3 585 aa26.01■■□□□ 1.75
TMEM17-203ENST00000494919 ACIN1Q9UKV3 1341 aaKnown RBP25.97■■□□□ 1.75
TMEM17-203ENST00000494919 TOP2BQ02880 1626 aa25.96■■□□□ 1.75
TMEM17-203ENST00000494919 TNIKQ9UKE5 1360 aa25.95■■□□□ 1.74
TMEM17-203ENST00000494919 DIEXFQ68CQ4 756 aaKnown RBP25.94■■□□□ 1.74
TMEM17-203ENST00000494919 NEUROD1Q13562 356 aa25.94■■□□□ 1.74
TMEM17-203ENST00000494919 BIVM-ERCC5R4GMW8 1640 aa25.9■■□□□ 1.74
TMEM17-203ENST00000494919 UBTFP17480 764 aaKnown RBP25.86■■□□□ 1.73
TMEM17-203ENST00000494919 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
TMEM17-203ENST00000494919 GOLGA3Q08378 1498 aa25.81■■□□□ 1.72
TMEM17-203ENST00000494919 CUX1P39880 1505 aa25.8■■□□□ 1.72
TMEM17-203ENST00000494919 PRDM2Q13029 1718 aa25.8■■□□□ 1.72
TMEM17-203ENST00000494919 CEP164Q9UPV0 1460 aa25.76■■□□□ 1.71
TMEM17-203ENST00000494919 KIF21BO75037 1637 aa25.76■■□□□ 1.71
TMEM17-203ENST00000494919 CENPBP07199 599 aaPredicted RBP25.74■■□□□ 1.71
TMEM17-203ENST00000494919 GTF3C3Q9Y5Q9 886 aa25.71■■□□□ 1.71
TMEM17-203ENST00000494919 MYT1Q01538 1121 aa25.7■■□□□ 1.7
TMEM17-203ENST00000494919 ZNF316A6NFI3 1004 aaPredicted RBP25.62■■□□□ 1.69
TMEM17-203ENST00000494919 RAPGEF2Q9Y4G8 1499 aa25.58■■□□□ 1.69
TMEM17-203ENST00000494919 KIF27Q86VH2 1401 aa25.54■■□□□ 1.68
TMEM17-203ENST00000494919 HNRNPUL2Q1KMD3 747 aaKnown RBP25.54■■□□□ 1.68
TMEM17-203ENST00000494919 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
TMEM17-203ENST00000494919 PRXQ9BXM0 1461 aa25.52■■□□□ 1.68
TMEM17-203ENST00000494919 CLIP1P30622 1438 aa25.5■■□□□ 1.67
TMEM17-203ENST00000494919 ERICH3Q5RHP9 1530 aa25.49■■□□□ 1.67
TMEM17-203ENST00000494919 NESP48681 1621 aa25.45■■□□□ 1.67
TMEM17-203ENST00000494919 YTHDC1Q96MU7 727 aaKnown RBP25.43■■□□□ 1.66
TMEM17-203ENST00000494919 FGD5Q6ZNL6 1462 aa25.43■■□□□ 1.66
TMEM17-203ENST00000494919 VPS8Q8N3P4 1428 aa25.42■■□□□ 1.66
TMEM17-203ENST00000494919 LAMC3Q9Y6N6 1575 aa25.42■■□□□ 1.66
TMEM17-203ENST00000494919 CUX2O14529 1486 aa25.37■■□□□ 1.65
TMEM17-203ENST00000494919 DNMBPQ6XZF7 1577 aa25.36■■□□□ 1.65
TMEM17-203ENST00000494919 MIER1Q8N108 512 aa25.35■■□□□ 1.65
TMEM17-203ENST00000494919 DNAJC5BQ9UF47 199 aa25.35■■□□□ 1.65
TMEM17-203ENST00000494919 RANGAP1P46060 587 aaPredicted RBP25.34■■□□□ 1.65
TMEM17-203ENST00000494919 APLP2Q06481 763 aa25.33■■□□□ 1.65
TMEM17-203ENST00000494919 IGF1RP08069 1367 aa25.31■■□□□ 1.64
TMEM17-203ENST00000494919 TOPBP1Q92547 1522 aa25.31■■□□□ 1.64
TMEM17-203ENST00000494919 POLA1P09884 1462 aaPredicted RBP25.24■■□□□ 1.63
TMEM17-203ENST00000494919 PDS5BQ9NTI5 1447 aa25.24■■□□□ 1.63
TMEM17-203ENST00000494919 ABCA10Q8WWZ4 1543 aa25.21■■□□□ 1.63
TMEM17-203ENST00000494919 URB2Q14146 1524 aaKnown RBP25.19■■□□□ 1.62
TMEM17-203ENST00000494919 RAD54L2Q9Y4B4 1467 aa25.19■■□□□ 1.62
TMEM17-203ENST00000494919 CARMIL1Q5VZK9 1371 aa25.17■■□□□ 1.62
TMEM17-203ENST00000494919 ARAP1Q96P48 1450 aa25.13■■□□□ 1.61
TMEM17-203ENST00000494919 KIF21AQ7Z4S6 1674 aa25.08■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms