RNA–Protein interactions for RNA: ENST00000494570.1

KDM4C-211, Transcript of lysine demethylase 4C, humanhuman

TSL 2

Gene KDM4C, Length 647 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-211ENST00000494570 AEBP2Q6ZN18 517 aaPredicted RBP23.55■■□□□ 1.36
KDM4C-211ENST00000494570 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
KDM4C-211ENST00000494570 NISCHQ9Y2I1 1504 aa20.13■□□□□ 0.81
KDM4C-211ENST00000494570 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
KDM4C-211ENST00000494570 PHF23Q9BUL5 403 aaPredicted RBP19.83■□□□□ 0.77
KDM4C-211ENST00000494570 FOXD1Q16676 465 aa18.7■□□□□ 0.58
KDM4C-211ENST00000494570 PLPPR3Q6T4P5 718 aa18.01■□□□□ 0.47
KDM4C-211ENST00000494570 CCDC180Q9P1Z9 1646 aa17.79■□□□□ 0.44
KDM4C-211ENST00000494570 ABCC9O60706 1549 aa17.57■□□□□ 0.4
KDM4C-211ENST00000494570 PPP6R1Q9UPN7 881 aa17.55■□□□□ 0.4
KDM4C-211ENST00000494570 ADRA2BP18089 450 aa17.51■□□□□ 0.39
KDM4C-211ENST00000494570 PIAS4Q8N2W9 510 aaPredicted RBP17.51■□□□□ 0.39
KDM4C-211ENST00000494570 MSH5O43196 834 aa17.47■□□□□ 0.39
KDM4C-211ENST00000494570 POTEDQ86YR6 584 aa16.87■□□□□ 0.29
KDM4C-211ENST00000494570 DCAF8L2P0C7V8 631 aa16.82■□□□□ 0.28
KDM4C-211ENST00000494570 NACADO15069 1562 aa16.81■□□□□ 0.28
KDM4C-211ENST00000494570 RB1CC1Q8TDY2 1594 aa16.8■□□□□ 0.28
KDM4C-211ENST00000494570 ZCCHC6Q5VYS8 1495 aaKnown RBP16.76■□□□□ 0.27
KDM4C-211ENST00000494570 MYO15BQ96JP2 1530 aa16.74■□□□□ 0.27
KDM4C-211ENST00000494570 DCAF1Q9Y4B6 1507 aa16.65■□□□□ 0.26
KDM4C-211ENST00000494570 PABPN1Q86U42 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
KDM4C-211ENST00000494570 BICRAQ9NZM4 1560 aa16.39■□□□□ 0.21
KDM4C-211ENST00000494570 UNC13AQ9UPW8 1703 aa16.36■□□□□ 0.21
KDM4C-211ENST00000494570 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.2
KDM4C-211ENST00000494570 SCRIBQ14160 1630 aa16.28■□□□□ 0.2
KDM4C-211ENST00000494570 SHROOM4Q9ULL8 1493 aa16.15■□□□□ 0.18
KDM4C-211ENST00000494570 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
KDM4C-211ENST00000494570 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
KDM4C-211ENST00000494570 DMRT2Q9Y5R5 561 aa15.94■□□□□ 0.14
KDM4C-211ENST00000494570 EIF4G1Q04637 1599 aaKnown RBP15.92■□□□□ 0.14
KDM4C-211ENST00000494570 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
KDM4C-211ENST00000494570 CECR2Q9BXF3 1484 aa15.79■□□□□ 0.12
KDM4C-211ENST00000494570 PPP4R3CPQ6ZMV5 832 aa15.79■□□□□ 0.12
KDM4C-211ENST00000494570 NCAPD3P42695 1498 aa15.59■□□□□ 0.09
KDM4C-211ENST00000494570 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
KDM4C-211ENST00000494570 SMARCA4P51532 1647 aa15.57■□□□□ 0.08
KDM4C-211ENST00000494570 BAZ1AQ9NRL2 1556 aaPredicted RBP15.54■□□□□ 0.08
KDM4C-211ENST00000494570 MROH2BQ7Z745 1585 aa15.53■□□□□ 0.08
KDM4C-211ENST00000494570 CNKSR2Q8WXI2 1034 aa15.48■□□□□ 0.07
KDM4C-211ENST00000494570 SMARCA2P51531 1590 aa15.48■□□□□ 0.07
KDM4C-211ENST00000494570 PEG3Q9GZU2 1588 aa15.46■□□□□ 0.07
KDM4C-211ENST00000494570 HMGXB3Q12766 1538 aa15.43■□□□□ 0.06
KDM4C-211ENST00000494570 HOXD11P31277 338 aaPredicted RBP15.4■□□□□ 0.06
KDM4C-211ENST00000494570 BAZ1BQ9UIG0 1483 aaKnown RBP15.39■□□□□ 0.05
KDM4C-211ENST00000494570 RSF1Q96T23 1441 aaPredicted RBP15.37■□□□□ 0.05
KDM4C-211ENST00000494570 RNF216Q9NWF9 866 aaPredicted RBP15.31■□□□□ 0.04
KDM4C-211ENST00000494570 WIZO95785 1651 aa15.29■□□□□ 0.04
KDM4C-211ENST00000494570 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
KDM4C-211ENST00000494570 NESP48681 1621 aa15.22■□□□□ 0.03
KDM4C-211ENST00000494570 NCBP3Q53F19 620 aaKnown RBP15.22■□□□□ 0.03
KDM4C-211ENST00000494570 TOP2AP11388 1531 aaKnown RBP15.14■□□□□ 0.01
KDM4C-211ENST00000494570 CADPSQ9ULU8 1353 aa15.13■□□□□ 0.01
KDM4C-211ENST00000494570 ERCC6Q03468 1493 aa15.09■□□□□ 0.01
KDM4C-211ENST00000494570 LAMC3Q9Y6N6 1575 aa15.08■□□□□ 0
KDM4C-211ENST00000494570 PDS5BQ9NTI5 1447 aa15.03■□□□□ -0
KDM4C-211ENST00000494570 CCDC88BA6NC98 1476 aa15.02■□□□□ -0
KDM4C-211ENST00000494570 CFTRP13569 1480 aa15.02■□□□□ -0
KDM4C-211ENST00000494570 NPM3O75607 178 aaKnown RBP15□□□□□ -0.01
KDM4C-211ENST00000494570 CUX2O14529 1486 aa14.98□□□□□ -0.01
KDM4C-211ENST00000494570 THOC2Q8NI27 1593 aaKnown RBP14.94□□□□□ -0.02
KDM4C-211ENST00000494570 CACNB1Q02641 598 aaPredicted RBP14.92□□□□□ -0.02
KDM4C-211ENST00000494570 KIF21AQ7Z4S6 1674 aa14.91□□□□□ -0.02
KDM4C-211ENST00000494570 FANCD2Q9BXW9 1451 aa14.91□□□□□ -0.02
KDM4C-211ENST00000494570 RNF39Q9H2S5 420 aa14.91□□□□□ -0.02
KDM4C-211ENST00000494570 SUPT5HO00267 1087 aaKnown RBP14.9□□□□□ -0.02
KDM4C-211ENST00000494570 MRC2Q9UBG0 1479 aa14.88□□□□□ -0.03
KDM4C-211ENST00000494570 CEP164Q9UPV0 1460 aa14.86□□□□□ -0.03
KDM4C-211ENST00000494570 WDR62O43379 1518 aa14.83□□□□□ -0.04
KDM4C-211ENST00000494570 KCNA4P22459 653 aa14.8□□□□□ -0.04
KDM4C-211ENST00000494570 URB2Q14146 1524 aaKnown RBP14.8□□□□□ -0.04
KDM4C-211ENST00000494570 C1QBPQ07021 282 aaKnown RBP14.7□□□□□ -0.06
KDM4C-211ENST00000494570 DNAJC5Q9H3Z4 198 aa14.68□□□□□ -0.06
KDM4C-211ENST00000494570 PRDM2Q13029 1718 aa14.68□□□□□ -0.06
KDM4C-211ENST00000494570 TOPBP1Q92547 1522 aa14.67□□□□□ -0.06
KDM4C-211ENST00000494570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.064e-7■■■■□ 26.6
KDM4C-211ENST00000494570 ABCC8Q09428 1581 aa14.62□□□□□ -0.07
KDM4C-211ENST00000494570 DNMBPQ6XZF7 1577 aa14.61□□□□□ -0.07
KDM4C-211ENST00000494570 IFT140Q96RY7 1462 aa14.58□□□□□ -0.08
KDM4C-211ENST00000494570 ZNF608Q9ULD9 1512 aaPredicted RBP14.58□□□□□ -0.08
KDM4C-211ENST00000494570 CUX1P39880 1505 aa14.56□□□□□ -0.08
KDM4C-211ENST00000494570 POLA1P09884 1462 aaPredicted RBP14.56□□□□□ -0.08
KDM4C-211ENST00000494570 RAD54L2Q9Y4B4 1467 aa14.52□□□□□ -0.08
KDM4C-211ENST00000494570 SOGA1O94964 1423 aa14.5□□□□□ -0.09
KDM4C-211ENST00000494570 TARBP1Q13395 1621 aaKnown RBP14.5□□□□□ -0.09
KDM4C-211ENST00000494570 FGD5Q6ZNL6 1462 aa14.5□□□□□ -0.09
KDM4C-211ENST00000494570 AQRO60306 1485 aaKnown RBP eCLIP14.49□□□□□ -0.09
KDM4C-211ENST00000494570 TDRD9Q8NDG6 1382 aaKnown RBP14.46□□□□□ -0.1
KDM4C-211ENST00000494570 WRNQ14191 1432 aaPredicted RBP eCLIP14.43□□□□□ -0.1
KDM4C-211ENST00000494570 EIF4G3O43432 1585 aaKnown RBP14.41□□□□□ -0.1
KDM4C-211ENST00000494570 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
KDM4C-211ENST00000494570 OSCARQ8IYS5 282 aa14.39□□□□□ -0.11
KDM4C-211ENST00000494570 ABCA10Q8WWZ4 1543 aa14.37□□□□□ -0.11
KDM4C-211ENST00000494570 U3KPZ7 1027 aaPredicted RBP14.37□□□□□ -0.11
KDM4C-211ENST00000494570 TOP2BQ02880 1626 aa14.37□□□□□ -0.11
KDM4C-211ENST00000494570 BIVM-ERCC5R4GMW8 1640 aa14.33□□□□□ -0.11
KDM4C-211ENST00000494570 GRIN2BQ13224 1484 aa14.31□□□□□ -0.12
KDM4C-211ENST00000494570 GAPVD1Q14C86 1478 aa14.31□□□□□ -0.12
KDM4C-211ENST00000494570 WDR97A6NE52 1622 aa14.31□□□□□ -0.12
KDM4C-211ENST00000494570 SNAPC4Q5SXM2 1469 aa14.31□□□□□ -0.12
KDM4C-211ENST00000494570 SLC4A2P04920 1241 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms