RNA–Protein interactions for RNA: ENST00000494472.1

PRKCE-213, Transcript of protein kinase C epsilon, humanhuman

TSL 3

Gene PRKCE, Length 583 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCE-213ENST00000494472 AEBP2Q6ZN18 517 aaPredicted RBP21.59■■□□□ 1.05
PRKCE-213ENST00000494472 NISCHQ9Y2I1 1504 aa20.87■□□□□ 0.93
PRKCE-213ENST00000494472 CHIC1Q5VXU3 224 aa20.05■□□□□ 0.8
PRKCE-213ENST00000494472 SENP3Q9H4L4 574 aaPredicted RBP18.41■□□□□ 0.54
PRKCE-213ENST00000494472 ABCC9O60706 1549 aa18.4■□□□□ 0.54
PRKCE-213ENST00000494472 DNAJC5BQ9UF47 199 aa18.29■□□□□ 0.52
PRKCE-213ENST00000494472 PHF23Q9BUL5 403 aaPredicted RBP18.11■□□□□ 0.49
PRKCE-213ENST00000494472 CCDC180Q9P1Z9 1646 aa18.05■□□□□ 0.48
PRKCE-213ENST00000494472 ZCCHC6Q5VYS8 1495 aaKnown RBP17.56■□□□□ 0.4
PRKCE-213ENST00000494472 DNAJC5Q9H3Z4 198 aa17.49■□□□□ 0.39
PRKCE-213ENST00000494472 DCAF1Q9Y4B6 1507 aa17.36■□□□□ 0.37
PRKCE-213ENST00000494472 FOXD1Q16676 465 aa17.28■□□□□ 0.36
PRKCE-213ENST00000494472 DCAF8L2P0C7V8 631 aa17.24■□□□□ 0.35
PRKCE-213ENST00000494472 SHROOM4Q9ULL8 1493 aa17.13■□□□□ 0.33
PRKCE-213ENST00000494472 MYO15BQ96JP2 1530 aa17.08■□□□□ 0.32
PRKCE-213ENST00000494472 RB1CC1Q8TDY2 1594 aa17.06■□□□□ 0.32
PRKCE-213ENST00000494472 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
PRKCE-213ENST00000494472 POTEDQ86YR6 584 aa16.91■□□□□ 0.3
PRKCE-213ENST00000494472 NACADO15069 1562 aa16.84■□□□□ 0.29
PRKCE-213ENST00000494472 SUPT5HO00267 1087 aaKnown RBP16.77■□□□□ 0.28
PRKCE-213ENST00000494472 CECR2Q9BXF3 1484 aa16.7■□□□□ 0.26
PRKCE-213ENST00000494472 BICRAQ9NZM4 1560 aa16.66■□□□□ 0.26
PRKCE-213ENST00000494472 UNC13AQ9UPW8 1703 aa16.56■□□□□ 0.24
PRKCE-213ENST00000494472 CC2D2AQ9P2K1 1620 aa16.55■□□□□ 0.24
PRKCE-213ENST00000494472 SCRIBQ14160 1630 aa16.52■□□□□ 0.24
PRKCE-213ENST00000494472 MSH5O43196 834 aa16.31■□□□□ 0.2
PRKCE-213ENST00000494472 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
PRKCE-213ENST00000494472 RSF1Q96T23 1441 aaPredicted RBP16.29■□□□□ 0.2
PRKCE-213ENST00000494472 CUX2O14529 1486 aa16.29■□□□□ 0.2
PRKCE-213ENST00000494472 TRIM41Q8WV44 630 aa16.18■□□□□ 0.18
PRKCE-213ENST00000494472 BAZ1AQ9NRL2 1556 aaPredicted RBP16.15■□□□□ 0.18
PRKCE-213ENST00000494472 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
PRKCE-213ENST00000494472 PIAS4Q8N2W9 510 aaPredicted RBP15.96■□□□□ 0.15
PRKCE-213ENST00000494472 SMARCA4P51532 1647 aa15.92■□□□□ 0.14
PRKCE-213ENST00000494472 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
PRKCE-213ENST00000494472 WIZO95785 1651 aa15.87■□□□□ 0.13
PRKCE-213ENST00000494472 TOP2AP11388 1531 aaKnown RBP15.86■□□□□ 0.13
PRKCE-213ENST00000494472 PPP6R1Q9UPN7 881 aa15.77■□□□□ 0.12
PRKCE-213ENST00000494472 PEG3Q9GZU2 1588 aa15.77■□□□□ 0.11
PRKCE-213ENST00000494472 SMARCA2P51531 1590 aa15.74■□□□□ 0.11
PRKCE-213ENST00000494472 CCDC88BA6NC98 1476 aa15.68■□□□□ 0.1
PRKCE-213ENST00000494472 ATAD2BQ9ULI0 1458 aa15.65■□□□□ 0.1
PRKCE-213ENST00000494472 ADRA2BP18089 450 aa15.65■□□□□ 0.1
PRKCE-213ENST00000494472 PLPPR3Q6T4P5 718 aa15.62■□□□□ 0.09
PRKCE-213ENST00000494472 BAZ1BQ9UIG0 1483 aaKnown RBP15.62■□□□□ 0.09
PRKCE-213ENST00000494472 NCAPD3P42695 1498 aa15.56■□□□□ 0.08
PRKCE-213ENST00000494472 NESP48681 1621 aa15.55■□□□□ 0.08
PRKCE-213ENST00000494472 THOC2Q8NI27 1593 aaKnown RBP15.53■□□□□ 0.08
PRKCE-213ENST00000494472 LOC105371045A0A1W2PR82 267 aa15.51■□□□□ 0.07
PRKCE-213ENST00000494472 HMGXB3Q12766 1538 aa15.5■□□□□ 0.07
PRKCE-213ENST00000494472 EEA1Q15075 1411 aa15.5■□□□□ 0.07
PRKCE-213ENST00000494472 OSCARQ8IYS5 282 aa15.44■□□□□ 0.06
PRKCE-213ENST00000494472 FAM9AQ8IZU1 332 aaPredicted RBP15.42■□□□□ 0.06
PRKCE-213ENST00000494472 WRNQ14191 1432 aaPredicted RBP eCLIP15.4■□□□□ 0.06
PRKCE-213ENST00000494472 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
PRKCE-213ENST00000494472 CSRNP3Q8WYN3 585 aa15.31■□□□□ 0.04
PRKCE-213ENST00000494472 TRIM26Q12899 539 aaPredicted RBP15.28■□□□□ 0.04
PRKCE-213ENST00000494472 PDS5BQ9NTI5 1447 aa15.25■□□□□ 0.03
PRKCE-213ENST00000494472 LAMC3Q9Y6N6 1575 aa15.24■□□□□ 0.03
PRKCE-213ENST00000494472 CFTRP13569 1480 aa15.24■□□□□ 0.03
PRKCE-213ENST00000494472 RIMBP3CA6NJZ7 1639 aa15.22■□□□□ 0.03
PRKCE-213ENST00000494472 RIMBP3BA6NNM3 1639 aa15.22■□□□□ 0.03
PRKCE-213ENST00000494472 RIMBP3Q9UFD9 1639 aa15.22■□□□□ 0.03
PRKCE-213ENST00000494472 TNIKQ9UKE5 1360 aa15.22■□□□□ 0.03
PRKCE-213ENST00000494472 PCGF6Q9BYE7 350 aa15.2■□□□□ 0.02
PRKCE-213ENST00000494472 TRHP20396 242 aaPredicted RBP15.19■□□□□ 0.02
PRKCE-213ENST00000494472 CADPSQ9ULU8 1353 aa15.18■□□□□ 0.02
PRKCE-213ENST00000494472 KIF21AQ7Z4S6 1674 aa15.18■□□□□ 0.02
PRKCE-213ENST00000494472 GOLGA3Q08378 1498 aa15.17■□□□□ 0.02
PRKCE-213ENST00000494472 SOGA1O94964 1423 aa15.17■□□□□ 0.02
PRKCE-213ENST00000494472 UBTFP17480 764 aaKnown RBP15.16■□□□□ 0.02
PRKCE-213ENST00000494472 TOP2BQ02880 1626 aa15.16■□□□□ 0.02
PRKCE-213ENST00000494472 CEP164Q9UPV0 1460 aa15.15■□□□□ 0.02
PRKCE-213ENST00000494472 MRC2Q9UBG0 1479 aa15.14■□□□□ 0.01
PRKCE-213ENST00000494472 WDR62O43379 1518 aa15.14■□□□□ 0.01
PRKCE-213ENST00000494472 SYNJ1O43426 1573 aa15.12■□□□□ 0.01
PRKCE-213ENST00000494472 CYB5RLQ6IPT4 315 aa15.12■□□□□ 0.01
PRKCE-213ENST00000494472 ARHGEF11O15085 1522 aa15.12■□□□□ 0.01
PRKCE-213ENST00000494472 BIVM-ERCC5R4GMW8 1640 aa15.1■□□□□ 0.01
PRKCE-213ENST00000494472 EHMT2Q96KQ7 1210 aa15.09■□□□□ 0.01
PRKCE-213ENST00000494472 ILDR1Q86SU0 546 aaPredicted RBP15.07■□□□□ 0
PRKCE-213ENST00000494472 KIF21BO75037 1637 aa15.06■□□□□ 0
PRKCE-213ENST00000494472 HRCP23327 699 aa15.06■□□□□ 0
PRKCE-213ENST00000494472 KIF27Q86VH2 1401 aa15.06■□□□□ 0
PRKCE-213ENST00000494472 CEP162Q5TB80 1403 aa15.05■□□□□ -0
PRKCE-213ENST00000494472 PRDM2Q13029 1718 aa15.04■□□□□ -0
PRKCE-213ENST00000494472 ZEB1P37275 1124 aaPredicted RBP15.02■□□□□ -0
PRKCE-213ENST00000494472 RUSC2Q8N2Y8 1516 aa15.01□□□□□ -0.01
PRKCE-213ENST00000494472 CUX1P39880 1505 aa14.99□□□□□ -0.01
PRKCE-213ENST00000494472 ERICH3Q5RHP9 1530 aa14.97□□□□□ -0.01
PRKCE-213ENST00000494472 APLP2Q06481 763 aa14.96□□□□□ -0.01
PRKCE-213ENST00000494472 FANCD2Q9BXW9 1451 aa14.95□□□□□ -0.02
PRKCE-213ENST00000494472 ARAP1Q96P48 1450 aa14.93□□□□□ -0.02
PRKCE-213ENST00000494472 PRXQ9BXM0 1461 aa14.92□□□□□ -0.02
PRKCE-213ENST00000494472 CLIP1P30622 1438 aa14.92□□□□□ -0.02
PRKCE-213ENST00000494472 RAPGEF2Q9Y4G8 1499 aa14.86□□□□□ -0.03
PRKCE-213ENST00000494472 DNMBPQ6XZF7 1577 aa14.85□□□□□ -0.03
PRKCE-213ENST00000494472 FGD5Q6ZNL6 1462 aa14.83□□□□□ -0.03
PRKCE-213ENST00000494472 VPS8Q8N3P4 1428 aa14.83□□□□□ -0.04
PRKCE-213ENST00000494472 IGF1RP08069 1367 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms